BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0063.p (343 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776715.1| chaperone activity ATPase [Herbaspirillum se... 618 e-175 ref|YP_004754199.1| putative ferredoxin:Oxidoreductase FAD/NAD(P... 607 e-172 ref|YP_001099076.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [H... 564 e-159 ref|YP_001352374.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [J... 560 e-158 ref|YP_001900259.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [R... 492 e-137 >ref|YP_003776715.1| chaperone activity ATPase [Herbaspirillum seropedicae SmR1] emb|CAM32597.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Herbaspirillum seropedicae] gb|ADJ64807.1| ATPase with chaperone activity, ATP-binding subunit protein [Herbaspirillum seropedicae SmR1] Length = 349 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 289/340 (85%), Positives = 313/340 (92%) Query: 1 MSFQVTVQPSGHQFTCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLVEGSVTHGPHQ 60 MSFQVTVQPSG QFTCD E+ILTAAIRAGVGLPYGCKNGACSSCKGKLV G V HGPHQ Sbjct: 1 MSFQVTVQPSGRQFTCDADESILTAAIRAGVGLPYGCKNGACSSCKGKLVSGQVEHGPHQ 60 Query: 61 ERALSAQDESLGFSLFCCARPNSDVVIEAREVAGIGDFPVKKMPGRVAKLDKVADDVIIL 120 ERALSA ++ LG +LFC A+P SDV IEAREVAG GD PV+K+P RVAKLDKVADDVI+L Sbjct: 61 ERALSAHEQQLGMALFCVAKPQSDVTIEAREVAGAGDIPVRKLPVRVAKLDKVADDVIVL 120 Query: 121 SLQLPANDRLQYKAGQYVEFMLRDGKRRSYSMANAPHKDEHLTLHIRHMPGGLFTDQVFS 180 SLQLPANDRLQYKAGQYVEF+LRDGKRRSYSMA APHKDEH++LHIRH+PGGLFTDQVF+ Sbjct: 121 SLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLPGGLFTDQVFT 180 Query: 181 TLKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIVEQLEHAKSTRPVTLYWG 240 TLKERDILR EGPLGTFFLREDSDKPI+LLASGTGFAPIKAIVEQLEHA S RPVTLYWG Sbjct: 181 TLKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRPVTLYWG 240 Query: 241 GRRPQDLYMDELCKTWAQSLPNFKYVPVISNAQPEDNWSGRAGFVHQAVIDDQPDLSGYQ 300 GRRPQDLYMD LC+ W Q+LPNFKYVPV+SNAQ EDNWSGR GFVH+AV++D PDLSG+Q Sbjct: 241 GRRPQDLYMDALCQQWEQTLPNFKYVPVVSNAQAEDNWSGRTGFVHRAVMEDFPDLSGHQ 300 Query: 301 VYACGAPIVVESAQRDFVAKCGLPEEEFYADSFTSAADLA 340 VYACGAPIVVESAQRDF A+CGLP++EFYADSFTS ADLA Sbjct: 301 VYACGAPIVVESAQRDFSAQCGLPQDEFYADSFTSEADLA 340 >ref|YP_004754199.1| putative ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region [Collimonas fungivorans Ter331] gb|AEK63376.1| putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region [Collimonas fungivorans Ter331] Length = 341 Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust. Identities = 283/341 (82%), Positives = 310/341 (90%) Query: 1 MSFQVTVQPSGHQFTCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLVEGSVTHGPHQ 60 MSFQ+TVQPSG QF+CDEGETILTAAIRAGVGLPYGCKNGACSSCKGKL+EG ++HG HQ Sbjct: 1 MSFQITVQPSGRQFSCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLLEGDISHGAHQ 60 Query: 61 ERALSAQDESLGFSLFCCARPNSDVVIEAREVAGIGDFPVKKMPGRVAKLDKVADDVIIL 120 E+AL ++E LGF+LFCCA P+SDV IEAREVAGIG+FPV+KMP RV KLDKVADDVI+L Sbjct: 61 EKALPVKEEQLGFALFCCATPHSDVTIEAREVAGIGEFPVRKMPTRVVKLDKVADDVIVL 120 Query: 121 SLQLPANDRLQYKAGQYVEFMLRDGKRRSYSMANAPHKDEHLTLHIRHMPGGLFTDQVFS 180 SLQLPAN+RLQY AGQYVEFMLRDGKRRSYSMANAP+KDE+LTLHIRHMPGGLFTDQVF+ Sbjct: 121 SLQLPANERLQYLAGQYVEFMLRDGKRRSYSMANAPYKDEYLTLHIRHMPGGLFTDQVFT 180 Query: 181 TLKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIVEQLEHAKSTRPVTLYWG 240 T+KERDILR EGPLGTFFLREDSDKP+VLLASGTGFAPIKA+VEQ H S RP+TLYWG Sbjct: 181 TMKERDILRLEGPLGTFFLREDSDKPMVLLASGTGFAPIKALVEQCAHTGSQRPITLYWG 240 Query: 241 GRRPQDLYMDELCKTWAQSLPNFKYVPVISNAQPEDNWSGRAGFVHQAVIDDQPDLSGYQ 300 GRRPQDLYM LC+ WA +LP+F +VPVISNAQPED W GR GFVHQAVIDD PDLS YQ Sbjct: 241 GRRPQDLYMMALCEEWAATLPDFTFVPVISNAQPEDQWQGRNGFVHQAVIDDLPDLSAYQ 300 Query: 301 VYACGAPIVVESAQRDFVAKCGLPEEEFYADSFTSAADLAT 341 VYACGAP+VVESAQRDFVA C LP EEFYADSFTS ADLA+ Sbjct: 301 VYACGAPVVVESAQRDFVALCKLPAEEFYADSFTSEADLAS 341 >ref|YP_001099076.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Herminiimonas arsenicoxydans] emb|CAL60949.1| putative Ferredoxin--NAD(+) reductase [Herminiimonas arsenicoxydans] Length = 342 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 255/340 (75%), Positives = 302/340 (88%) Query: 1 MSFQVTVQPSGHQFTCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLVEGSVTHGPHQ 60 M+FQVTVQPSG QF+C+ ETIL+AAIRAGVGLPYGCKNGAC SC+G ++ G VTHG HQ Sbjct: 1 MTFQVTVQPSGRQFSCEADETILSAAIRAGVGLPYGCKNGACGSCRGMVLSGDVTHGAHQ 60 Query: 61 ERALSAQDESLGFSLFCCARPNSDVVIEAREVAGIGDFPVKKMPGRVAKLDKVADDVIIL 120 ERAL A DE+ GFSLFCCARP+ DVVIEAREV G+G+FP+KK+P R+A+L++V DDV+ + Sbjct: 61 ERALPAADEAKGFSLFCCARPHGDVVIEAREVLGLGEFPIKKLPSRIARLERVGDDVMSI 120 Query: 121 SLQLPANDRLQYKAGQYVEFMLRDGKRRSYSMANAPHKDEHLTLHIRHMPGGLFTDQVFS 180 +LQLPA+++LQY+AGQY+EFML+DGKRRSYS+ANAPH EH+TLHIRHMPGGLFTDQVFS Sbjct: 121 ALQLPASEKLQYRAGQYIEFMLKDGKRRSYSLANAPHVGEHVTLHIRHMPGGLFTDQVFS 180 Query: 181 TLKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIVEQLEHAKSTRPVTLYWG 240 T+KERDILRFEGPLG+FFLREDSDKP+VLLASGTGFAPIKAIVEQ H KS RP+TLYWG Sbjct: 181 TMKERDILRFEGPLGSFFLREDSDKPMVLLASGTGFAPIKAIVEQAVHIKSERPMTLYWG 240 Query: 241 GRRPQDLYMDELCKTWAQSLPNFKYVPVISNAQPEDNWSGRAGFVHQAVIDDQPDLSGYQ 300 GRRP+DLYM LC+ WA+++PNF+YVPVISNA ED W+G+ GFVHQ V++D PDLS YQ Sbjct: 241 GRRPKDLYMHALCEEWARTIPNFRYVPVISNATQEDQWNGQTGFVHQVVMNDLPDLSNYQ 300 Query: 301 VYACGAPIVVESAQRDFVAKCGLPEEEFYADSFTSAADLA 340 VYACGAP +V++A+ DF A C LPEEEFYAD+FTS ADLA Sbjct: 301 VYACGAPAMVDAARTDFSASCNLPEEEFYADAFTSEADLA 340 >ref|YP_001352374.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp. Marseille] gb|ABR89961.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp. Marseille] Length = 342 Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust. Identities = 255/340 (75%), Positives = 300/340 (88%) Query: 1 MSFQVTVQPSGHQFTCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLVEGSVTHGPHQ 60 M+FQVTV+PSG QF+CD ETIL AA+RAGVGLPYGCKNGACSSCKG ++ GSVTHGPHQ Sbjct: 1 MTFQVTVKPSGRQFSCDADETILNAALRAGVGLPYGCKNGACSSCKGLVLSGSVTHGPHQ 60 Query: 61 ERALSAQDESLGFSLFCCARPNSDVVIEAREVAGIGDFPVKKMPGRVAKLDKVADDVIIL 120 RALSA DE +GFSLFCCARPN DVVIEAREV GIG+FPVKK+P RVAK++K+ DDV+++ Sbjct: 61 ARALSAADEEIGFSLFCCARPNGDVVIEAREVLGIGEFPVKKLPVRVAKVEKLGDDVMLI 120 Query: 121 SLQLPANDRLQYKAGQYVEFMLRDGKRRSYSMANAPHKDEHLTLHIRHMPGGLFTDQVFS 180 +LQLPA++RLQY+AGQY+EF+L+DGKRRSYS+ NAPH DEHLTLHIRHMPGGLFTD VF+ Sbjct: 121 ALQLPASERLQYRAGQYIEFLLKDGKRRSYSLGNAPHSDEHLTLHIRHMPGGLFTDHVFT 180 Query: 181 TLKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIVEQLEHAKSTRPVTLYWG 240 TLKERDILRFEGP G+FFLREDS KP+VLLASGTGFAPIKAIVEQ H KS RP+TLYWG Sbjct: 181 TLKERDILRFEGPQGSFFLREDSKKPMVLLASGTGFAPIKAIVEQALHDKSQRPMTLYWG 240 Query: 241 GRRPQDLYMDELCKTWAQSLPNFKYVPVISNAQPEDNWSGRAGFVHQAVIDDQPDLSGYQ 300 GRRP+DLYM LC+ WA+ +P+F YVPVIS+A +D W GR+GFVH+AV++D P++S YQ Sbjct: 241 GRRPKDLYMHALCEQWAREIPHFNYVPVISHATADDQWQGRSGFVHKAVMEDLPNMSAYQ 300 Query: 301 VYACGAPIVVESAQRDFVAKCGLPEEEFYADSFTSAADLA 340 VYACG P++VE+AQ +F A C LP EEFYAD+FTS ADLA Sbjct: 301 VYACGTPVMVEAAQAEFSALCQLPREEFYADAFTSEADLA 340 >ref|YP_001900259.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia pickettii 12J] gb|ACD27827.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ralstonia pickettii 12J] Length = 349 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 228/345 (66%), Positives = 274/345 (79%), Gaps = 6/345 (1%) Query: 1 MSFQVTVQPSGHQFTCDEGETILTAAIRAGVGLPYGCKNGACSSCKGKLVEGSVTHGPHQ 60 M++Q+ V PSG QF ++GETIL AA+R G+GLPYGCKNGAC SCKG + EGS+ G H Sbjct: 1 MAYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGNVREGSIVQGTHS 60 Query: 61 ERALSAQDESLGFSLFCCARPNSDVVIEAREVAGIGDFPVKKMPGRVAKLDKVADDVIIL 120 ALSAQ+ + G +LFCCA P +DV IE REV G GD P+KK+P RVA L+K A DV I+ Sbjct: 61 PNALSAQEATEGRALFCCATPATDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIV 120 Query: 121 SLQLPANDRLQYKAGQYVEFMLRDGKRRSYSMANAPHKDEHLTLHIRHMPGGLFTDQVFS 180 LQLPA +R+Q+ AGQYVEF+LRDGKRRSYS+AN PH D + LHIRHMPGG+FTD VF Sbjct: 121 KLQLPATERMQFLAGQYVEFLLRDGKRRSYSIANPPHDDGPIELHIRHMPGGVFTDYVFG 180 Query: 181 T------LKERDILRFEGPLGTFFLREDSDKPIVLLASGTGFAPIKAIVEQLEHAKSTRP 234 +KERDILRFEGPLG+FFLRE+SDKPI+LLASGTGFAPIKAI+E + STRP Sbjct: 181 AKEGAPAMKERDILRFEGPLGSFFLREESDKPIILLASGTGFAPIKAIIEHAQFIGSTRP 240 Query: 235 VTLYWGGRRPQDLYMDELCKTWAQSLPNFKYVPVISNAQPEDNWSGRAGFVHQAVIDDQP 294 +TLYWGGRRPQDLYM + WA++LPNF YVPV+SNA PED W+GR GFVHQAV+ D P Sbjct: 241 MTLYWGGRRPQDLYMHAKAEEWARTLPNFTYVPVVSNALPEDAWTGRTGFVHQAVMADHP 300 Query: 295 DLSGYQVYACGAPIVVESAQRDFVAKCGLPEEEFYADSFTSAADL 339 DLSG++VYACGAP+V+ SA+ DF A+CG+ + F+ADSFTS ADL Sbjct: 301 DLSGHEVYACGAPVVINSARADFAAQCGMHPDAFFADSFTSEADL 345