BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0046.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004152736.1| ABC transporter [Variovorax paradoxus EPS] >...   166   7e-40
ref|YP_003278102.1| ATP-binding protein BioM [Comamonas testoste...   145   2e-33
ref|ZP_07046960.1| ATP-binding protein BioM [Comamonas testoster...   144   3e-33
ref|YP_004487585.1| ABC transporter-like protein [Delftia sp. Cs...   142   1e-32
ref|YP_001565613.1| ABC transporter-like protein [Delftia acidov...   142   2e-32

>ref|YP_004152736.1| ABC transporter [Variovorax paradoxus EPS]
 gb|ADU34625.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 259

 Score =  166 bits (421), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 77/106 (72%), Positives = 95/106 (89%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WAGRA+GELSQGQRQQVCL+ALQI  PATLLLDEP+++LDL SQ RL+AQ+ AT QQ
Sbjct: 145 LAAWAGRAIGELSQGQRQQVCLLALQIGQPATLLLDEPFASLDLLSQARLAAQLEATGQQ 204

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERA 106
           I++STHLL+HV DFERVLWL+QG++RADGPGR++C AYA++V +RA
Sbjct: 205 IVVSTHLLEHVYDFERVLWLEQGRVRADGPGREVCEAYAENVRQRA 250


>ref|YP_003278102.1| ATP-binding protein BioM [Comamonas testosteroni CNB-2]
 gb|ACY32806.1| ATP-binding protein BioM [Comamonas testosteroni CNB-2]
          Length = 245

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WA RAV  LSQGQRQQVC ++L I  P  LLLDEP+++LDLP Q RL+  IA+  QQ
Sbjct: 129 LAHWAERAVSSLSQGQRQQVCWLSLLIAAPQLLLLDEPFASLDLPGQARLAQDIASAPQQ 188

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERAARDTA 111
           +++STH+LDHV+DFERV+WL+QG+LRADGPGRDIC+AY   V E+  + ++
Sbjct: 189 VLVSTHVLDHVRDFERVIWLEQGRLRADGPGRDICSAYETSVREQLLKKSS 239


>ref|ZP_07046960.1| ATP-binding protein BioM [Comamonas testosteroni S44]
 gb|EFI59291.1| ATP-binding protein BioM [Comamonas testosteroni S44]
          Length = 249

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WA RAV  LSQGQRQQVC ++L I  P  LLLDEP+++LDLP Q RL+  IA   QQ
Sbjct: 133 LAHWAERAVSSLSQGQRQQVCWLSLLIAAPQLLLLDEPFASLDLPGQARLAQDIATAPQQ 192

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERAARDTA 111
           +++STH+LDHV+DFERV+WL+QG+LRADGPGRDIC+AY   V E+  + ++
Sbjct: 193 VLVSTHVLDHVRDFERVIWLEQGRLRADGPGRDICSAYETSVQEQLLKKSS 243


>ref|YP_004487585.1| ABC transporter-like protein [Delftia sp. Cs1-4]
 gb|AEF89230.1| ABC transporter related protein [Delftia sp. Cs1-4]
          Length = 246

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 82/105 (78%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L DWA RAV  LSQGQRQQVC +AL I  P  LLLDEP+++LDLP Q RL+  IAA  QQ
Sbjct: 137 LADWAPRAVAGLSQGQRQQVCWLALLIAAPRVLLLDEPFASLDLPGQARLARDIAAAEQQ 196

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHER 105
           +++STH+LDHV+ F RVLWL++GK+RADGPG ++CAAY  DV  R
Sbjct: 197 VLVSTHVLDHVRSFGRVLWLERGKVRADGPGHEVCAAYEADVARR 241


>ref|YP_001565613.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
 gb|ABX37228.1| ABC transporter related [Delftia acidovorans SPH-1]
          Length = 282

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 81/105 (77%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L DWA RAV  LSQGQRQQVC +AL I  P  LLLDEP+++LDLP Q RL+  IAA  QQ
Sbjct: 173 LADWAPRAVAGLSQGQRQQVCWLALLIAAPRVLLLDEPFASLDLPGQARLARDIAAAEQQ 232

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHER 105
           +++STH+LDHV+ F RVLWL++GK+RADGPG  +CAAY  DV  R
Sbjct: 233 VLVSTHVLDHVRSFGRVLWLERGKVRADGPGHGVCAAYEADVARR 277