BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0027.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775258.1| transcription regulator protein [Herbaspiril... 452 e-125 ref|YP_004751257.1| GlvR family transcriptional regulator [Colli... 436 e-120 ref|YP_003752631.1| RpiR family transcriptional regulator [Ralst... 318 7e-85 ref|YP_583557.1| RpiR/GlvR family transcriptional regulator [Cup... 315 6e-84 emb|CCA84107.1| putative transcriptional regulator; RpiR family ... 315 8e-84 >ref|YP_003775258.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63350.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 327 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/322 (69%), Positives = 260/322 (80%) Query: 30 KITSLQGGGAVARVLGKLYPNLSKAHRKTADYVLANTFRAATMTIDELSEAAGISLATAN 89 K SLQG GAVA+ +GKLY LSK+HRKTADYVL N FRAATMTIDELSEAAGIS+ATAN Sbjct: 6 KNISLQGAGAVAQAVGKLYAQLSKSHRKTADYVLGNPFRAATMTIDELSEAAGISVATAN 65 Query: 90 RFAHALGFDGYAPFRNALVADFASSLAPVEKMRHEVQKSATSVEIMSAALSNDIRNIEAT 149 RFAHALGFDGYA FR ALV+DFA++LAPVEK+R+EVQ++ATS EIM+AA +DI NIEAT Sbjct: 66 RFAHALGFDGYASFRAALVSDFATTLAPVEKLRNEVQRAATSAEIMAAAFDSDIANIEAT 125 Query: 150 LQSLVPGHCDQAVEMILKAERIFVVGFGASAFLAGIMVHALEPFCRTVLSGVHPGGPSQT 209 + L C+ AV+MIL AERIF+ GFGASA+LAG+M HALEP+ RTV S GGPSQ Sbjct: 126 RRMLTASDCEAAVDMILAAERIFITGFGASAYLAGLMAHALEPYVRTVSSVALAGGPSQA 185 Query: 210 GRQFFKLDERDVVIAMAYPRYATDTVRLARRAVEKGAKLIAFTDLPHSPLVPLADVTIYS 269 GRQFFKLD RD+VI M +PRYA DTV L +RAVEKGA+++A TD P SPLVPLADVTIY+ Sbjct: 186 GRQFFKLDNRDLVIPMVFPRYAADTVWLTQRAVEKGARILAITDSPGSPLVPLADVTIYA 245 Query: 270 QTERQLSPTSDAAALVLIQALCDAVAHRAKRSVQAASEMTEFVLPWLYQAEQHEPVRVAK 329 QT+R+LSPTSDAAAL+LIQALCDAVAHRA+RSVQAAS+M EFVLPWLY +Q + V+K Sbjct: 246 QTDRKLSPTSDAAALILIQALCDAVAHRARRSVQAASQMAEFVLPWLYLPQQQQRPVVSK 305 Query: 330 RTAAATATATANVKSAIRNRKS 351 A TA S R K+ Sbjct: 306 AAGRAKTAKTAKDVSTRRKTKA 327 >ref|YP_004751257.1| GlvR family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK60434.1| transcriptional regulator, GlvR-family [Collimonas fungivorans Ter331] Length = 328 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/298 (71%), Positives = 246/298 (82%) Query: 23 QRHMYNSKITSLQGGGAVARVLGKLYPNLSKAHRKTADYVLANTFRAATMTIDELSEAAG 82 Q + +S IT+ Q AVA +GK YP LSKAHRK ADYVLAN F ATMTIDEL++A G Sbjct: 3 QHSVQHSAITAWQRESAVAARIGKAYPELSKAHRKAADYVLANVFHTATMTIDELADAVG 62 Query: 83 ISLATANRFAHALGFDGYAPFRNALVADFASSLAPVEKMRHEVQKSATSVEIMSAALSND 142 +SLATANRFAHALGFDGY FR ALV DFASSLAPVEK+R +V + A+S EIM+AAL D Sbjct: 63 VSLATANRFAHALGFDGYPAFRAALVLDFASSLAPVEKLRDQVLRPASSAEIMAAALRAD 122 Query: 143 IRNIEATLQSLVPGHCDQAVEMILKAERIFVVGFGASAFLAGIMVHALEPFCRTVLSGVH 202 ++N+EAT ++L P HCDQAV MIL AERIF++GFGASAFLAGIM HALEP+CRTVLS Sbjct: 123 MQNLEATQRALSPAHCDQAVSMILNAERIFILGFGASAFLAGIMAHALEPYCRTVLSVAS 182 Query: 203 PGGPSQTGRQFFKLDERDVVIAMAYPRYATDTVRLARRAVEKGAKLIAFTDLPHSPLVPL 262 PGGPSQ RQFFKLD+RD+VIA+A+PRY TDTV LA RA E+ A+++AFTD P SPLVPL Sbjct: 183 PGGPSQAARQFFKLDQRDLVIALAFPRYVTDTVTLAGRAKERAAQVLAFTDAPTSPLVPL 242 Query: 263 ADVTIYSQTERQLSPTSDAAALVLIQALCDAVAHRAKRSVQAASEMTEFVLPWLYQAE 320 ADVT+Y+QTER LSPTSDAAAL LIQA+CDAVAHRA RSV AAS+MTE VLPWL+ + Sbjct: 243 ADVTLYAQTERLLSPTSDAAALALIQAVCDAVAHRANRSVHAASKMTEAVLPWLHHPD 300 >ref|YP_003752631.1| RpiR family transcriptional regulator [Ralstonia solanacearum PSI07] emb|CBJ51354.1| putative transcriptional regulator; RpiR family [Ralstonia solanacearum PSI07] emb|CCA82312.1| putative transcriptional regulator; RpiR family [blood disease bacterium R229] Length = 332 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 157/285 (55%), Positives = 210/285 (73%), Gaps = 2/285 (0%) Query: 55 HRKTADYVLANTFRAATMTIDELSEAAGISLATANRFAHALGFDGYAPFRNALVADFASS 114 H++ A+YVLAN FRAATM IDE +EA G+S+ATANRFAHALGFDGY FR LV F ++ Sbjct: 37 HQRMAEYVLANPFRAATMRIDEFAEAVGMSVATANRFAHALGFDGYPRFRAELVRGFEAT 96 Query: 115 LAPVEKMRHEVQKSATSVEIMSAALSNDIRNIEATLQSLVPGHCDQAVEMILKAERIFVV 174 LAPVEK+RHE+ + A+S EI +A+L+ DI N+EAT + L P C++AV+ IL A RI+VV Sbjct: 97 LAPVEKLRHELARPASSAEIFAASLNEDIGNLEATRRMLDPAACERAVDAILAAPRIYVV 156 Query: 175 GFGASAFLAGIMVHALEPFCRTVLSGVHPGGPSQTGRQFFKLDERDVVIAMAYPRYATDT 234 GFGAS +LAG++ H L+ +C TVLS PGG S RQ K+ D++IA+A+PRYA DT Sbjct: 157 GFGASGYLAGLLRHGLDLYCDTVLSVSQPGGASDAARQLRKIAPDDLLIAIAFPRYAADT 216 Query: 235 VRLARRAVEKGAKLIAFTDLPHSPLVPLADVTIYSQTERQLSPTSDAAALVLIQALCDAV 294 + LA+R + G +++A TD P SPL PLAD+ +Y++TERQ + TSD A + LI+ALC AV Sbjct: 217 ITLAKRVRDHGGRVLALTDGPASPLAPLADIALYARTERQFAATSDTATVALIEALCGAV 276 Query: 295 AHRAKRSVQAASEMTEFVLPWLY--QAEQHEPVRVAKRTAAATAT 337 AHR+K S+++A+ +T FVLPWL+ QA + P +AATAT Sbjct: 277 AHRSKHSLESAANLTAFVLPWLHAGQAPRATPAAHTDTVSAATAT 321 >ref|YP_583557.1| RpiR/GlvR family transcriptional regulator [Cupriavidus metallidurans CH34] gb|ABF08288.1| transcriptional regulator, RpiR/GlvR-family [Cupriavidus metallidurans CH34] Length = 337 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 155/295 (52%), Positives = 209/295 (70%) Query: 37 GGAVARVLGKLYPNLSKAHRKTADYVLANTFRAATMTIDELSEAAGISLATANRFAHALG 96 G ++ + + P L+ AH++ A YVL N FRAATM IDE + A +S+ATANRFA ALG Sbjct: 41 GLLISERIARALPTLTPAHQRMAQYVLENPFRAATMRIDEFATAVDVSVATANRFARALG 100 Query: 97 FDGYAPFRNALVADFASSLAPVEKMRHEVQKSATSVEIMSAALSNDIRNIEATLQSLVPG 156 F+GY FR LV F ++LAPVE++R E+ + T+ E+ +A+L + IRN+EAT ++L P Sbjct: 101 FEGYPQFRTELVRGFEATLAPVERLRDELARPTTAAEVFAASLEDGIRNLEATRRALDPE 160 Query: 157 HCDQAVEMILKAERIFVVGFGASAFLAGIMVHALEPFCRTVLSGVHPGGPSQTGRQFFKL 216 C++AV IL+AER++V+GFGAS FLAG++ H LE CR V S + GG S GRQ FKL Sbjct: 161 ACERAVSAILEAERVYVMGFGASGFLAGLLQHGLEMHCRMVTSVSNSGGASHAGRQLFKL 220 Query: 217 DERDVVIAMAYPRYATDTVRLARRAVEKGAKLIAFTDLPHSPLVPLADVTIYSQTERQLS 276 +D+VIA+A+PRY TDT+ LA+R E G +L+A TD P SPL PLAD T+Y+ T + S Sbjct: 221 QPQDLVIAIAFPRYVTDTIMLAQRVKEHGGRLMALTDGPASPLAPLADYTLYANTGYRFS 280 Query: 277 PTSDAAALVLIQALCDAVAHRAKRSVQAASEMTEFVLPWLYQAEQHEPVRVAKRT 331 SDA L LI+ALC AVAHR+ RSV+AA+EMTEF+LPWL+ A R+A ++ Sbjct: 281 ANSDATVLALIEALCGAVAHRSARSVKAAAEMTEFLLPWLHGAPDARGGRIAPKS 335 >emb|CCA84107.1| putative transcriptional regulator; RpiR family [Ralstonia syzygii R24] Length = 332 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/266 (56%), Positives = 201/266 (75%) Query: 55 HRKTADYVLANTFRAATMTIDELSEAAGISLATANRFAHALGFDGYAPFRNALVADFASS 114 H++ A+YVLAN FRAATM IDE +EA G+S+ATANRFAHALGFDGY FR LV F ++ Sbjct: 37 HQRMAEYVLANPFRAATMRIDEFAEAVGMSVATANRFAHALGFDGYPRFRAELVRGFEAT 96 Query: 115 LAPVEKMRHEVQKSATSVEIMSAALSNDIRNIEATLQSLVPGHCDQAVEMILKAERIFVV 174 LAPVEK+RHE+ + A+S EI +A+L+ DI N+EAT + L P C++AV+ IL A RI+VV Sbjct: 97 LAPVEKLRHELARPASSAEIFAASLNEDIGNLEATRRMLDPAACERAVDAILAAPRIYVV 156 Query: 175 GFGASAFLAGIMVHALEPFCRTVLSGVHPGGPSQTGRQFFKLDERDVVIAMAYPRYATDT 234 GFGAS +LAG++ H L+ +C TVLS PGG S RQ K+ D++IA+A+PRYA DT Sbjct: 157 GFGASGYLAGLLRHGLDLYCDTVLSVSQPGGASDAARQLRKIAPDDLLIAIAFPRYAADT 216 Query: 235 VRLARRAVEKGAKLIAFTDLPHSPLVPLADVTIYSQTERQLSPTSDAAALVLIQALCDAV 294 + LA+R + G +++A TD P SPL PLAD+ +Y++TERQ + TSD A + LI+ALC AV Sbjct: 217 ITLAKRVRDHGGRVLALTDGPASPLAPLADIALYARTERQFAATSDTATVALIEALCGAV 276 Query: 295 AHRAKRSVQAASEMTEFVLPWLYQAE 320 AHR+K S+++A+ +T FVLPWL+ + Sbjct: 277 AHRSKHSLESAANLTAFVLPWLHAGQ 302