BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0014.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777822.1| DeoR family transcription regulator protein ... 459 e-127 ref|NP_384735.1| putative transcription regulator protein [Sinor... 262 7e-68 ref|ZP_01012983.1| putative transcription regulator protein [Mar... 261 7e-68 ref|YP_002824795.1| transcriptional regulator, DeoR family [Sino... 261 8e-68 ref|YP_001325918.1| DeoR family transcriptional regulator [Sinor... 261 1e-67 >ref|YP_003777822.1| DeoR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65914.1| DeoR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/261 (83%), Positives = 238/261 (91%) Query: 46 MINHKRRKRMLSLLTEHANASVEQLCQWLNASAATVRRDISWLAERNMLNRIRGGAERLA 105 MINH RRKR+LSLL EH +VEQ C LNASAATVRRDI+WLAER+ML R RGGAERLA Sbjct: 1 MINHNRRKRLLSLLGEHTALTVEQFCHLLNASAATVRRDIAWLAERDMLTRTRGGAERLA 60 Query: 106 PKRNAFSLSGETFQNSLERFPAEKRAIARHAAGMCEDGETVIINGGTTTFMMAEFLAHKQ 165 KR+AF+LSGETFQ SL R PA+KRAIARHAA MC++GET+IINGGTTTF+MAE+LA K+ Sbjct: 61 QKRSAFALSGETFQASLARQPAQKRAIARHAAEMCDNGETIIINGGTTTFLMAEYLAQKR 120 Query: 166 LKILTNSFLMAERLLTTSENQIIVPGGQVYREQNVILSPFDNDITQHHYAGKMFMGVYGL 225 LKILTNSFLMAERLLTTSENQIIVPGGQ+YREQNVILSPF+NDITQHHYA KMFMG+YG+ Sbjct: 121 LKILTNSFLMAERLLTTSENQIIVPGGQIYREQNVILSPFENDITQHHYASKMFMGIYGV 180 Query: 226 SMLGLMEVDPLLIQAEKRLLGQAEQLIVLVDSSKFSRKAGLILCGLNRVSCLITDTGVSD 285 SMLGLME DPLLIQAEKRLLGQAEQL+VL DSSKFSRKAGLILCGLNRV+CL+TDTG+SD Sbjct: 181 SMLGLMEADPLLIQAEKRLLGQAEQLVVLADSSKFSRKAGLILCGLNRVNCLVTDTGISD 240 Query: 286 AAVQMMEQAGVKVAAVAPESE 306 AA QMMEQAGVKV VAPE E Sbjct: 241 AAAQMMEQAGVKVVTVAPEHE 261 >ref|NP_384735.1| putative transcription regulator protein [Sinorhizobium meliloti 1021] ref|YP_004547701.1| DeoR family transcriptional regulator [Sinorhizobium meliloti AK83] emb|CAC45201.1| Transcription regulator DeoR family [Sinorhizobium meliloti 1021] gb|AEG03178.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti BL225C] gb|AEG52087.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti AK83] gb|AEH77547.1| Transcription regulator [Sinorhizobium meliloti SM11] Length = 270 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 131/265 (49%), Positives = 186/265 (70%), Gaps = 3/265 (1%) Query: 46 MINHKRRKRMLSLLTEHANASVEQLCQWLNASAATVRRDISWLAERNMLNRIRGGAERLA 105 M +R + +LS + E A+V +L +S AT+RRDI+ L + L R+RGGAE + Sbjct: 1 MHEKERHRIILSAVQEKPVATVPELVDLTGSSEATIRRDIAALHVQKRLRRVRGGAEAIN 60 Query: 106 PKRNAFSLSGETFQNSLERFPAEKRAIARHAAGMCEDGETVIINGGTTTFMMAEFLAHKQ 165 P + L+G F+ + EK+AIAR A +C+DGE +IINGGTTTF M FLA+++ Sbjct: 61 PPQ-FVGLAGRPFRVNEGLHAREKQAIAREAVALCQDGEPIIINGGTTTFQMVHFLANRR 119 Query: 166 LKILTNSFLMAERLLTTSENQIIVPGGQVYREQNVILSPFDNDITQHHYAGKMFMGVYGL 225 +++ TNSF +AE LL S+N +++ GG +YREQN+ILSPF+ND+T++ YA +MFMG GL Sbjct: 120 MQVFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFENDVTRNFYARRMFMGAQGL 179 Query: 226 SMLGLMEVDPLLIQAEKRLLGQAEQLIVLVDSSKFSRKAGLILCGLNRVSCLITDTGVSD 285 LGLME DPLLIQAE++L+ QA+ L+VLVDSSKF R++ LILCGL R++ +ITD+G+ D Sbjct: 180 GPLGLMEADPLLIQAEQKLIDQADDLVVLVDSSKFHRRSSLILCGLKRIATVITDSGIED 239 Query: 286 AAVQMMEQAGVK--VAAVAPESELE 308 M+E AGV VAA + +++ E Sbjct: 240 RHASMLENAGVSLIVAAQSAKADAE 264 >ref|ZP_01012983.1| putative transcription regulator protein [Maritimibacter alkaliphilus HTCC2654] gb|EAQ13287.1| putative transcription regulator protein [Rhodobacterales bacterium HTCC2654] Length = 266 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 125/249 (50%), Positives = 177/249 (71%), Gaps = 1/249 (0%) Query: 50 KRRKRMLSLLTEHANASVEQLCQWLNASAATVRRDISWLAERNMLNRIRGGAERLAPKRN 109 +R + +LS + E +V +L S AT+RRDIS L ++ L R+RGGAE L P Sbjct: 5 ERHRLILSAVQERPIVTVGELVALTETSEATIRRDISTLDKQKRLRRVRGGAEALTPP-P 63 Query: 110 AFSLSGETFQNSLERFPAEKRAIARHAAGMCEDGETVIINGGTTTFMMAEFLAHKQLKIL 169 L+G F + EK+ IAR A +C+DG+ +IINGGTTTF M LA+++++++ Sbjct: 64 LPGLAGRPFVVNQTINAEEKQVIAREAVALCDDGDPIIINGGTTTFQMVHHLANRRVQVM 123 Query: 170 TNSFLMAERLLTTSENQIIVPGGQVYREQNVILSPFDNDITQHHYAGKMFMGVYGLSMLG 229 TNSF +AE LL ++N ++VPGG +YREQN+ILSPF+ND+T+H+YA +MFMG YG+ +G Sbjct: 124 TNSFPIAEHLLKHTKNTVMVPGGALYREQNIILSPFENDMTRHYYAKRMFMGAYGVGPMG 183 Query: 230 LMEVDPLLIQAEKRLLGQAEQLIVLVDSSKFSRKAGLILCGLNRVSCLITDTGVSDAAVQ 289 LME DPLLIQAE++L+GQA++L+VLVDSSKF ++ L+LCGL R+ +ITD G+SD Sbjct: 184 LMENDPLLIQAEEKLIGQADELVVLVDSSKFENRSSLVLCGLERIDVVITDEGISDRVAS 243 Query: 290 MMEQAGVKV 298 M+E A V+V Sbjct: 244 MLEAAEVRV 252 >ref|YP_002824795.1| transcriptional regulator, DeoR family [Sinorhizobium fredii NGR234] gb|ACP24042.1| transcriptional regulator, DeoR family [Sinorhizobium fredii NGR234] Length = 270 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 126/263 (47%), Positives = 184/263 (69%), Gaps = 1/263 (0%) Query: 46 MINHKRRKRMLSLLTEHANASVEQLCQWLNASAATVRRDISWLAERNMLNRIRGGAERLA 105 M +R + +LS + E +V +L + +S AT+RRD++ L + L R+RGGAE + Sbjct: 1 MHEKERHRIILSAVQEKPVVTVPELVELTGSSEATIRRDVAALHVQKRLRRVRGGAEAIN 60 Query: 106 PKRNAFSLSGETFQNSLERFPAEKRAIARHAAGMCEDGETVIINGGTTTFMMAEFLAHKQ 165 P + L+G F + EK+AIAR A +C+DGE +IINGGTTTF M FLA+++ Sbjct: 61 PPQ-FVGLAGRPFSVNEGLHAREKQAIAREAVALCQDGEPIIINGGTTTFQMVHFLANRR 119 Query: 166 LKILTNSFLMAERLLTTSENQIIVPGGQVYREQNVILSPFDNDITQHHYAGKMFMGVYGL 225 +++ TNSF +AE LL S+N +++ GG +YREQN+ILSPFDND+T++ YA +MFMG GL Sbjct: 120 MQVFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFDNDVTRNFYARRMFMGAQGL 179 Query: 226 SMLGLMEVDPLLIQAEKRLLGQAEQLIVLVDSSKFSRKAGLILCGLNRVSCLITDTGVSD 285 LGLME DPLLIQAE++L+ QA++L+VLVDSSKF +++ LILCGL R++ +ITD+G+ D Sbjct: 180 GPLGLMEADPLLIQAEQKLIDQADELVVLVDSSKFHKRSSLILCGLKRIATVITDSGIED 239 Query: 286 AAVQMMEQAGVKVAAVAPESELE 308 M+E AGV + +S+++ Sbjct: 240 RHASMLESAGVTLVIANAKSKVD 262 >ref|YP_001325918.1| DeoR family transcriptional regulator [Sinorhizobium medicae WSM419] gb|ABR59083.1| transcriptional regulator, DeoR family [Sinorhizobium medicae WSM419] Length = 270 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/257 (49%), Positives = 179/257 (69%), Gaps = 1/257 (0%) Query: 46 MINHKRRKRMLSLLTEHANASVEQLCQWLNASAATVRRDISWLAERNMLNRIRGGAERLA 105 M +R + +LS + E A+V +L +S AT+RRDI+ L + L R+RGGAE + Sbjct: 1 MHEKERHRIILSAVQEKPVATVPELVDLTGSSEATIRRDIAALHVQKRLRRVRGGAEAIN 60 Query: 106 PKRNAFSLSGETFQNSLERFPAEKRAIARHAAGMCEDGETVIINGGTTTFMMAEFLAHKQ 165 P + L+G F+ + EK+AIAR A +C+DGE +IINGGTTTF M FLA+++ Sbjct: 61 PPQ-FVGLAGRPFRVNEGLHAREKQAIAREAVALCQDGEPIIINGGTTTFQMVHFLANRR 119 Query: 166 LKILTNSFLMAERLLTTSENQIIVPGGQVYREQNVILSPFDNDITQHHYAGKMFMGVYGL 225 +++ TNSF +AE LL S+N +++ GG +YREQN+ILSPF+ND+T++ YA +MFMG GL Sbjct: 120 MQVFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFENDVTRNFYARRMFMGAQGL 179 Query: 226 SMLGLMEVDPLLIQAEKRLLGQAEQLIVLVDSSKFSRKAGLILCGLNRVSCLITDTGVSD 285 LGLME DPLLIQAE++L+ QA+ L+VLVDSSKF R++ LILCGL R++ +ITD G+ D Sbjct: 180 GPLGLMEADPLLIQAEQKLIDQADDLVVLVDSSKFHRRSSLILCGLKRIATVITDAGIED 239 Query: 286 AAVQMMEQAGVKVAAVA 302 M+E AGV + A Sbjct: 240 RHASMLENAGVSLIVAA 256