BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0231.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004750711.1| Fe-S protein [Collimonas fungivorans Ter331]... 601 e-169 ref|YP_001860422.1| D-lactate dehydrogenase (cytochrome) [Burkho... 584 e-164 ref|YP_001890616.1| D-lactate dehydrogenase [Burkholderia phytof... 582 e-164 ref|ZP_02882118.1| D-lactate dehydrogenase (cytochrome) [Burkhol... 582 e-164 ref|YP_004231249.1| D-lactate dehydrogenase (cytochrome) [Burkho... 580 e-163 >ref|YP_004750711.1| Fe-S protein [Collimonas fungivorans Ter331] gb|AEK59888.1| Fe-S protein [Collimonas fungivorans Ter331] Length = 1005 Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust. Identities = 290/344 (84%), Positives = 310/344 (90%), Gaps = 6/344 (1%) Query: 1 MVLDHLNAWLKPYGLWFPVDVSTAAQCTIGGMSGNNSCGSRSIEYGNMVHNVIAIDAVLA 60 MVLDHLNAWLKP+GLWFPVDVSTAAQCTIGGM+GNNSCGSRSIEYGNMVHNV AIDAVLA Sbjct: 123 MVLDHLNAWLKPHGLWFPVDVSTAAQCTIGGMAGNNSCGSRSIEYGNMVHNVAAIDAVLA 182 Query: 61 DGTEGRFGRLPDMTEMPEMPGRGRIGEIVRGLQAIAQRERGEIVERVPKVLRRVAGYNID 120 DGT+GRF RL M + GRIG IV GLQ IAQRER EI ERVPKVLRRV GYNID Sbjct: 183 DGTQGRFERLDRMAQ------NGRIGAIVAGLQHIAQRERAEIAERVPKVLRRVGGYNID 236 Query: 121 IFDCQNPRAYTDDGVANLAHILIGSEGTLAYSRQITLALMPLPAHKVLGVVNFPTFYQSM 180 +FDCQNPRAYTDDGVANLAHIL+GSEGTLAYSRQ+TL+L PLPAHKVLGVVNFPTFYQ+M Sbjct: 237 LFDCQNPRAYTDDGVANLAHILVGSEGTLAYSRQLTLSLAPLPAHKVLGVVNFPTFYQAM 296 Query: 181 DMTQHIVKLGPTAVELVDRTMIDLAISNPAFRPVIEKALVGHPEAILLVEFAGENLDQQL 240 DMTQHIVKLGPTAVELVDRTMIDL++SNPAF+PVIEKAL G P+AILLVEFAG++ L Sbjct: 297 DMTQHIVKLGPTAVELVDRTMIDLSMSNPAFKPVIEKALAGQPQAILLVEFAGDDHAALL 356 Query: 241 DKLKLLSELMGDLGLPGSVVDMPVANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 300 +KL L +LM DLGLPGSVV M A +QKALW+VRKAGLNIMMSMKGDGKPVSFIEDCAV Sbjct: 357 NKLASLDQLMADLGLPGSVVQMSGAADQKALWDVRKAGLNIMMSMKGDGKPVSFIEDCAV 416 Query: 301 PLEHLAEYTRQLTEVFHKYGTEGTWYAHASVGTLHVRPILDMRR 344 PLEHLAEYT QLTEVFH+YGTEGTWYAHASVGTLHVRPILDMRR Sbjct: 417 PLEHLAEYTSQLTEVFHQYGTEGTWYAHASVGTLHVRPILDMRR 460 >ref|YP_001860422.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] gb|ACC73376.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phymatum STM815] Length = 1005 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 280/344 (81%), Positives = 306/344 (88%), Gaps = 6/344 (1%) Query: 1 MVLDHLNAWLKPYGLWFPVDVSTAAQCTIGGMSGNNSCGSRSIEYGNMVHNVIAIDAVLA 60 +VLDHLNAWLKP+GLWFPVDVSTAAQCTIGGM+GNNSCGSRSIEYGNMVHNV AIDA+LA Sbjct: 128 IVLDHLNAWLKPHGLWFPVDVSTAAQCTIGGMAGNNSCGSRSIEYGNMVHNVEAIDAILA 187 Query: 61 DGTEGRFGRLPDMTEMPEMPGRGRIGEIVRGLQAIAQRERGEIVERVPKVLRRVAGYNID 120 DG + RF L + + R+ +IV G++AIAQRER EIV +VPKVLRRVAGYNID Sbjct: 188 DGAQARFASLREEQQ------DARLQQIVEGVKAIAQRERDEIVAQVPKVLRRVAGYNID 241 Query: 121 IFDCQNPRAYTDDGVANLAHILIGSEGTLAYSRQITLALMPLPAHKVLGVVNFPTFYQSM 180 +FDCQNPRAYTDDG ANLAH+L+GSEGTLA+SRQ+TL L PLPAHK+LGVVNFPTF+Q+M Sbjct: 242 LFDCQNPRAYTDDGFANLAHLLVGSEGTLAFSRQLTLRLSPLPAHKMLGVVNFPTFWQAM 301 Query: 181 DMTQHIVKLGPTAVELVDRTMIDLAISNPAFRPVIEKALVGHPEAILLVEFAGENLDQQL 240 D+TQHIVKL P AVELVDRTMIDLA+SNPAFRPVIEKALVG PEAILLVEFAGEN D+Q Sbjct: 302 DLTQHIVKLKPVAVELVDRTMIDLAMSNPAFRPVIEKALVGRPEAILLVEFAGENRDEQF 361 Query: 241 DKLKLLSELMGDLGLPGSVVDMPVANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 300 LK L+ELM DLGLP SVV MP A EQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV Sbjct: 362 ASLKQLTELMADLGLPDSVVQMPDAAEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 421 Query: 301 PLEHLAEYTRQLTEVFHKYGTEGTWYAHASVGTLHVRPILDMRR 344 PLEHLAEYT +LTEVFH+ GTEGTWYAHASVGTLHVRPILDMRR Sbjct: 422 PLEHLAEYTSRLTEVFHRNGTEGTWYAHASVGTLHVRPILDMRR 465 >ref|YP_001890616.1| D-lactate dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD21245.1| D-lactate dehydrogenase (cytochrome) [Burkholderia phytofirmans PsJN] Length = 1007 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 279/344 (81%), Positives = 306/344 (88%), Gaps = 6/344 (1%) Query: 1 MVLDHLNAWLKPYGLWFPVDVSTAAQCTIGGMSGNNSCGSRSIEYGNMVHNVIAIDAVLA 60 +VLDHLNAWLKP+GLWFPVDVSTAAQCTIGGM+GNNSCGSRSIEYGNMVHNV AIDA+LA Sbjct: 130 VVLDHLNAWLKPHGLWFPVDVSTAAQCTIGGMAGNNSCGSRSIEYGNMVHNVDAIDAILA 189 Query: 61 DGTEGRFGRLPDMTEMPEMPGRGRIGEIVRGLQAIAQRERGEIVERVPKVLRRVAGYNID 120 DG+E F L E P R+ +I+ G++ IA+RER EIV RVPKVLRRVAGYNID Sbjct: 190 DGSEAHFASLR------EAPQGARLQQILAGVKQIAERERDEIVARVPKVLRRVAGYNID 243 Query: 121 IFDCQNPRAYTDDGVANLAHILIGSEGTLAYSRQITLALMPLPAHKVLGVVNFPTFYQSM 180 +FDCQNPRAYTDDGVANLAH+L+GSEGTLA+SRQ+TL L PLP HK LGVVNFPTF+QSM Sbjct: 244 VFDCQNPRAYTDDGVANLAHLLVGSEGTLAFSRQLTLRLAPLPVHKTLGVVNFPTFWQSM 303 Query: 181 DMTQHIVKLGPTAVELVDRTMIDLAISNPAFRPVIEKALVGHPEAILLVEFAGENLDQQL 240 ++TQHIVKL P AVELVDRTMIDLA+SNPAFRPVI KALVG P+AILLVEFAGE+ D QL Sbjct: 304 NLTQHIVKLKPVAVELVDRTMIDLAMSNPAFRPVIGKALVGEPQAILLVEFAGEDRDAQL 363 Query: 241 DKLKLLSELMGDLGLPGSVVDMPVANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 300 LK L+ELM DLGLP SVV+MP ANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV Sbjct: 364 ASLKQLTELMADLGLPDSVVEMPDANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 423 Query: 301 PLEHLAEYTRQLTEVFHKYGTEGTWYAHASVGTLHVRPILDMRR 344 PLEHLAEYT +LTEVFH++GTEGTWYAHASVGTLHVRPILDMRR Sbjct: 424 PLEHLAEYTSRLTEVFHRHGTEGTWYAHASVGTLHVRPILDMRR 467 >ref|ZP_02882118.1| D-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] gb|EDT12363.1| D-lactate dehydrogenase (cytochrome) [Burkholderia graminis C4D1M] Length = 1006 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 275/344 (79%), Positives = 307/344 (89%), Gaps = 6/344 (1%) Query: 1 MVLDHLNAWLKPYGLWFPVDVSTAAQCTIGGMSGNNSCGSRSIEYGNMVHNVIAIDAVLA 60 +VLDHLNAWLKP+GLWFPVDVSTAAQCTIGGM+GNNSCGSRSIEYGNMVHNV AIDA+LA Sbjct: 130 VVLDHLNAWLKPHGLWFPVDVSTAAQCTIGGMAGNNSCGSRSIEYGNMVHNVEAIDAILA 189 Query: 61 DGTEGRFGRLPDMTEMPEMPGRGRIGEIVRGLQAIAQRERGEIVERVPKVLRRVAGYNID 120 DG+E RF L ++P R+ +I+ G++ IA+RER EI RVPKVLRRVAGYNID Sbjct: 190 DGSEARFASLR------QVPQGARLQQILEGVKRIAERERDEIAARVPKVLRRVAGYNID 243 Query: 121 IFDCQNPRAYTDDGVANLAHILIGSEGTLAYSRQITLALMPLPAHKVLGVVNFPTFYQSM 180 +FDCQNPRAYTDDGVANLAH+L+GSEGTLA+SRQ+TL L PLPAHK LGVVNFPTF+Q+M Sbjct: 244 LFDCQNPRAYTDDGVANLAHLLVGSEGTLAFSRQLTLKLAPLPAHKTLGVVNFPTFWQAM 303 Query: 181 DMTQHIVKLGPTAVELVDRTMIDLAISNPAFRPVIEKALVGHPEAILLVEFAGENLDQQL 240 D TQHIVKL P AVELVDRTMIDLA+SNPAFRPV+ KALVG P+A+LLVEFAGE+ D QL Sbjct: 304 DFTQHIVKLKPVAVELVDRTMIDLAMSNPAFRPVVAKALVGEPQAVLLVEFAGESRDAQL 363 Query: 241 DKLKLLSELMGDLGLPGSVVDMPVANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 300 + L+ L+ELM DLGLPGSVV+MP N QKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV Sbjct: 364 ESLRQLTELMADLGLPGSVVEMPDMNAQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 423 Query: 301 PLEHLAEYTRQLTEVFHKYGTEGTWYAHASVGTLHVRPILDMRR 344 PLEHLAEYT +LTEVFH++GTEGTWYAHASVGTLHVRPILDMRR Sbjct: 424 PLEHLAEYTSKLTEVFHRHGTEGTWYAHASVGTLHVRPILDMRR 467 >ref|YP_004231249.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] gb|ADX58189.1| D-lactate dehydrogenase (cytochrome) [Burkholderia sp. CCGE1001] Length = 1006 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 275/344 (79%), Positives = 305/344 (88%), Gaps = 6/344 (1%) Query: 1 MVLDHLNAWLKPYGLWFPVDVSTAAQCTIGGMSGNNSCGSRSIEYGNMVHNVIAIDAVLA 60 +VLDHLNAWLKP+GLWFPVDVSTAAQCTIGGM+GNNSCGSRSIEYGNMVHNV AIDA+LA Sbjct: 130 VVLDHLNAWLKPHGLWFPVDVSTAAQCTIGGMAGNNSCGSRSIEYGNMVHNVAAIDAILA 189 Query: 61 DGTEGRFGRLPDMTEMPEMPGRGRIGEIVRGLQAIAQRERGEIVERVPKVLRRVAGYNID 120 DG+E F L + P R+ +IV G++ IAQRER EIV RVPKVLRRV GYNID Sbjct: 190 DGSEAHFASLRNP------PQGARLQQIVEGVRQIAQRERDEIVARVPKVLRRVGGYNID 243 Query: 121 IFDCQNPRAYTDDGVANLAHILIGSEGTLAYSRQITLALMPLPAHKVLGVVNFPTFYQSM 180 +FDCQNPRAYTDDGVANLAH+L+GSEGTLA+SRQ+TL L PLPAHK LGVVNFPTF+Q+M Sbjct: 244 VFDCQNPRAYTDDGVANLAHLLVGSEGTLAFSRQLTLKLAPLPAHKTLGVVNFPTFWQAM 303 Query: 181 DMTQHIVKLGPTAVELVDRTMIDLAISNPAFRPVIEKALVGHPEAILLVEFAGENLDQQL 240 D+TQHIVKL P AVELVDRTMIDLA+SNPAFRPV+ KALVG P+A+LLVEFAGE+ D QL Sbjct: 304 DLTQHIVKLKPVAVELVDRTMIDLAMSNPAFRPVVAKALVGEPQAVLLVEFAGESRDAQL 363 Query: 241 DKLKLLSELMGDLGLPGSVVDMPVANEQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 300 L+ L+ELM DLGLPGSVV+MP N QKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV Sbjct: 364 QSLRQLTELMADLGLPGSVVEMPDMNAQKALWEVRKAGLNIMMSMKGDGKPVSFIEDCAV 423 Query: 301 PLEHLAEYTRQLTEVFHKYGTEGTWYAHASVGTLHVRPILDMRR 344 PLEHLA+YT +LTEVFH++GTEGTWYAHASVGTLHVRPILDMRR Sbjct: 424 PLEHLADYTSRLTEVFHRHGTEGTWYAHASVGTLHVRPILDMRR 467