BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0227.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004750707.1| GntR family transcriptional regulator [Colli... 410 e-113 ref|YP_003909916.1| GntR family transcriptional regulator [Burkh... 375 e-102 ref|YP_003608595.1| GntR family transcriptional regulator [Burkh... 374 e-102 ref|ZP_02882114.1| transcriptional regulator, GntR family [Burkh... 374 e-101 ref|YP_004231245.1| GntR family transcriptional regulator [Burkh... 372 e-101 >ref|YP_004750707.1| GntR family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK59884.1| Transcriptional regulator, GntR family [Collimonas fungivorans Ter331] Length = 241 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/233 (87%), Positives = 217/233 (93%), Gaps = 4/233 (1%) Query: 14 QSEKQIIPAAL-PKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNERELCETLGISRTPLR 72 Q EK PA L PKLERQRLHDTVV+HLRNLIVEAVL PGTKLNERELCETLGISRTPLR Sbjct: 8 QEEK---PAPLVPKLERQRLHDTVVDHLRNLIVEAVLTPGTKLNERELCETLGISRTPLR 64 Query: 73 EALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGELACERITPVEVAEI 132 EALKVLAAEGLI+ISPNRGASVSKM+ETEI ETFELMSGLEAMSGELAC+RITPVE+AEI Sbjct: 65 EALKVLAAEGLIEISPNRGASVSKMSETEIWETFELMSGLEAMSGELACDRITPVELAEI 124 Query: 133 KALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNRRLQALRFKSNFR 192 KALHYAMLACKAQNDLPGYYSRNQ IH+KIN+AARNSVL QTYLGLNRRL+ALRFKSNF+ Sbjct: 125 KALHYAMLACKAQNDLPGYYSRNQAIHDKINDAARNSVLRQTYLGLNRRLKALRFKSNFQ 184 Query: 193 PEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPAPPAANEA 245 P KWDSAAHDHDEMVKALEARDGKRLA+ILRQHLLDKRDAVL A PA ++A Sbjct: 185 PTKWDSAAHDHDEMVKALEARDGKRLAAILRQHLLDKRDAVLMAAALPAESKA 237 >ref|YP_003909916.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1003] gb|ADN60625.1| transcriptional regulator, GntR family [Burkholderia sp. CCGE1003] Length = 242 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/251 (75%), Positives = 210/251 (83%), Gaps = 15/251 (5%) Query: 1 MQNSAIELTNKLDQSEKQIIPA--ALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNER 58 MQNS E + +PA ALPK+ERQRLHDTVVEH+R IVE VL PG KLNER Sbjct: 1 MQNSEFEGS----------LPASPALPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNER 50 Query: 59 ELCETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGE 118 ELCETLGISRTPLREALKVLAAEGLI+ISPNRGASVSKM+E E+RETFELMSGLEA SGE Sbjct: 51 ELCETLGISRTPLREALKVLAAEGLIEISPNRGASVSKMSEAELRETFELMSGLEAFSGE 110 Query: 119 LACERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGL 178 LA ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ + Sbjct: 111 LAAERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSV 170 Query: 179 NRRLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 NRRLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V A Sbjct: 171 NRRLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQA 230 Query: 239 PPAANEAPAGN 249 +EA AG+ Sbjct: 231 R---DEAAAGS 238 >ref|YP_003608595.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1002] gb|ADG19084.1| transcriptional regulator, GntR family [Burkholderia sp. CCGE1002] Length = 249 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/231 (77%), Positives = 199/231 (86%), Gaps = 3/231 (1%) Query: 24 LPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNERELCETLGISRTPLREALKVLAAEGL 83 +PK+ERQRLHDTVVEH+R IVE VL PG KLNERELCETLGISRTPLREALKVLAAEGL Sbjct: 16 MPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNERELCETLGISRTPLREALKVLAAEGL 75 Query: 84 IDISPNRGASVSKMTETEIRETFELMSGLEAMSGELACERITPVEVAEIKALHYAMLACK 143 I+ISPNRGASVSKM+E E+RETFELMSGLEA SGELA ERIT E+AEIKALHYAMLAC+ Sbjct: 76 IEISPNRGASVSKMSEAEVRETFELMSGLEAFSGELAAERITAAELAEIKALHYAMLACR 135 Query: 144 AQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNRRLQALRFKSNFRPEKWDSAAHDH 203 AQNDLPGYYSRNQ IH+KINEAARNS L QTY+ +NRRLQALRF+SN++ KWD A HDH Sbjct: 136 AQNDLPGYYSRNQAIHDKINEAARNSALRQTYVSVNRRLQALRFRSNYQTPKWDRAIHDH 195 Query: 204 DEMVKALEARDGKRLASILRQHLLDKRDAVLNVPAPP---AANEAPAGNTN 251 DEM+KALEARDGK+L++ILRQHLLDKRDAVL V A+ P G N Sbjct: 196 DEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQVQEEVVASARYPVGKQN 246 >ref|ZP_02882114.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] gb|EDT12359.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] Length = 242 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/238 (76%), Positives = 202/238 (84%), Gaps = 8/238 (3%) Query: 1 MQNSAIELTNKLDQSEKQIIPAALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNEREL 60 MQNS IE + A LPK+ERQRLHDTVVEH+R IVE VL PG KLNEREL Sbjct: 1 MQNSEIEAGSA--------GSAVLPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNEREL 52 Query: 61 CETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGELA 120 CETLGISRTPLREALKVLAAEGLI+ISPNRGASVSKM+E E+RETFELMSGLEA SGELA Sbjct: 53 CETLGISRTPLREALKVLAAEGLIEISPNRGASVSKMSEAELRETFELMSGLEAFSGELA 112 Query: 121 CERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNR 180 ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ +NR Sbjct: 113 AERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSVNR 172 Query: 181 RLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 RLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V + Sbjct: 173 RLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQS 230 >ref|YP_004231245.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1001] gb|ADX58185.1| transcriptional regulator, GntR family [Burkholderia sp. CCGE1001] Length = 242 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/238 (76%), Positives = 202/238 (84%), Gaps = 8/238 (3%) Query: 1 MQNSAIELTNKLDQSEKQIIPAALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNEREL 60 MQNS +E + + A LPK+ERQRLHDTVVEH+R IVE VL PG KLNEREL Sbjct: 1 MQNSEVEGGS--------LGAAQLPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNEREL 52 Query: 61 CETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGELA 120 CETLGISRTPLREALKVLAAEGLIDI PNRGASVSKM+E E+RETFELMSGLEA SGELA Sbjct: 53 CETLGISRTPLREALKVLAAEGLIDIWPNRGASVSKMSEAELRETFELMSGLEAFSGELA 112 Query: 121 CERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNR 180 ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ +NR Sbjct: 113 AERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSVNR 172 Query: 181 RLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 RLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V + Sbjct: 173 RLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQS 230