BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0225.p         (116 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775383.1| endoribonuclease L-PSP protein [Herbaspirill...   214   2e-54
ref|YP_004752269.1| putative translation initiation inhibitor, y...   214   2e-54
ref|YP_773249.1| endoribonuclease L-PSP [Burkholderia ambifaria ...   193   8e-48
ref|YP_368853.1| endoribonuclease L-PSP [Burkholderia sp. 383] >...   193   9e-48
ref|YP_620872.1| endoribonuclease L-PSP [Burkholderia cenocepaci...   192   1e-47

>ref|YP_003775383.1| endoribonuclease L-PSP protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63475.1| endoribonuclease L-PSP protein [Herbaspirillum seropedicae SmR1]
          Length = 116

 Score =  214 bits (546), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 107/116 (92%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M+VQRLHVG RLSE AIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGS K  
Sbjct: 1   MSVQRLHVGNRLSEVAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSDKSK 60

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           ILSCQI+++DVKDF GMNAVWD WVA GN PPRATVEAKLARPELLVEIIIVAAQK
Sbjct: 61  ILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARPELLVEIIIVAAQK 116


>ref|YP_004752269.1| putative translation initiation inhibitor, yjgF family [Collimonas
           fungivorans Ter331]
 gb|AEK61446.1| Putative translation initiation inhibitor, yjgF family [Collimonas
           fungivorans Ter331]
          Length = 116

 Score =  214 bits (546), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 98/116 (84%), Positives = 109/116 (93%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           MT+QRLHVGKRLSE AIHNGT+YLAGQ+AEDTTQNIEGQTRE LGHIDRLL EAGS K H
Sbjct: 1   MTIQRLHVGKRLSEVAIHNGTIYLAGQLAEDTTQNIEGQTRESLGHIDRLLVEAGSDKHH 60

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           ILSCQIY+ADVKDF+GMNAVWD+WV++ N PPRATVEAKLARPE+L+EII+VAAQK
Sbjct: 61  ILSCQIYLADVKDFDGMNAVWDSWVSASNAPPRATVEAKLARPEILIEIIVVAAQK 116


>ref|YP_773249.1| endoribonuclease L-PSP [Burkholderia ambifaria AMMD]
 ref|ZP_02907595.1| Endoribonuclease L-PSP [Burkholderia ambifaria MEX-5]
 gb|ABI86915.1| Endoribonuclease L-PSP [Burkholderia ambifaria AMMD]
 gb|EDT41256.1| Endoribonuclease L-PSP [Burkholderia ambifaria MEX-5]
          Length = 117

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 102/116 (87%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I+GQTREVLGHIDRLLAEA S K H
Sbjct: 1   MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIKGQTREVLGHIDRLLAEANSDKAH 60

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           +LS QIYI+D+ +FEGMNA WDAWVA GNTPPRATVEAKLA P LLVEI++VAAQ+
Sbjct: 61  LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116


>ref|YP_368853.1| endoribonuclease L-PSP [Burkholderia sp. 383]
 gb|ABB08209.1| Endoribonuclease L-PSP [Burkholderia sp. 383]
          Length = 117

 Score =  193 bits (490), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 102/116 (87%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I+GQTREVLGHIDRLLAEA S K H
Sbjct: 1   MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIKGQTREVLGHIDRLLAEANSDKAH 60

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           +LS QIYI+D+ +FEGMNA WDAWVA GNTPPRATVEAKLA P LLVEI++VAAQ+
Sbjct: 61  LLSVQIYISDLANFEGMNAEWDAWVAHGNTPPRATVEAKLADPALLVEIVVVAAQR 116


>ref|YP_620872.1| endoribonuclease L-PSP [Burkholderia cenocepacia AU 1054]
 ref|YP_835117.1| endoribonuclease L-PSP [Burkholderia cenocepacia HI2424]
 ref|YP_001764747.1| endoribonuclease L-PSP [Burkholderia cenocepacia MC0-3]
 ref|YP_001808101.1| endoribonuclease L-PSP [Burkholderia ambifaria MC40-6]
 ref|YP_002230610.1| endoribonuclease L-PSP family protein [Burkholderia cenocepacia
           J2315]
 gb|ABF75899.1| Endoribonuclease L-PSP [Burkholderia cenocepacia AU 1054]
 gb|ABK08224.1| Endoribonuclease L-PSP [Burkholderia cenocepacia HI2424]
 gb|ACA90625.1| Endoribonuclease L-PSP [Burkholderia cenocepacia MC0-3]
 gb|ACB63885.1| Endoribonuclease L-PSP [Burkholderia ambifaria MC40-6]
 emb|CAR51778.1| endoribonuclease L-PSP family protein [Burkholderia cenocepacia
           J2315]
          Length = 117

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 101/116 (87%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M V R HVG RLSE AIHNGTVYLAGQIAEDTTQ+I GQTREVLGHIDRLLAEA S K H
Sbjct: 1   MAVIRHHVGARLSETAIHNGTVYLAGQIAEDTTQDIRGQTREVLGHIDRLLAEANSDKAH 60

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           +LS QIYI+D+ +FEGMNA WDAWVA GNTPPRATVEAKLA P LLVEI++VAAQ+
Sbjct: 61  LLSVQIYISDLANFEGMNAEWDAWVAPGNTPPRATVEAKLADPALLVEIVVVAAQR 116