BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0218.p (499 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752586.1| ribose ABC transport system, ATP-binding pro... 756 0.0 ref|YP_003906104.1| ABC transporter-like protein [Burkholderia s... 755 0.0 ref|YP_004227235.1| ABC transporter [Burkholderia sp. CCGE1001] ... 751 0.0 ref|YP_557366.1| ABC sugar transporter, ATPase subunit [Burkhold... 746 0.0 ref|YP_001894605.1| ABC transporter [Burkholderia phytofirmans P... 746 0.0 >ref|YP_004752586.1| ribose ABC transport system, ATP-binding protein RbsA [Collimonas fungivorans Ter331] gb|AEK61763.1| Ribose ABC transport system, ATP-binding protein RbsA [Collimonas fungivorans Ter331] Length = 495 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/498 (76%), Positives = 423/498 (84%), Gaps = 4/498 (0%) Query: 1 MSVAVSFQHVCKDFGPVRVLHDISFDLVPGRVVGLLGENGAGKSTLMKILAGYEAISDGL 60 MSVAV F+++ KDFG VRVLH +SFDL GRV GLLGENGAGKSTLMKILAGYE+I++G Sbjct: 1 MSVAVRFENIRKDFGAVRVLHGVSFDLELGRVYGLLGENGAGKSTLMKILAGYESITEGE 60 Query: 61 LLIDGQPHQFSDSRAAEACGIVLIHQEFNLAEHLTIAQNMFLGHEKRCDWPRGWLLDDDA 120 L IDG+ F+ SR AEACGIVLIHQEFNLAEHLTIAQN+FLGHEKR +GWLLDD A Sbjct: 61 LTIDGESRHFTGSRQAEACGIVLIHQEFNLAEHLTIAQNIFLGHEKR----KGWLLDDAA 116 Query: 121 MRRDAAHYLQQVGLDLDPDTKVSQLIVAEKQLVEIARALSRQARLLIMDEPTAPLTSSET 180 MR +AA L QVGLDL PDTKVS LIVAEKQLVEIA+ALSR+ARLLIMDEP+A LTSSET Sbjct: 117 MRSEAAACLAQVGLDLSPDTKVSALIVAEKQLVEIAKALSRKARLLIMDEPSATLTSSET 176 Query: 181 ERLFAVMAQLKAAGTTILYISHKLDEVERNTDEVIVMRDGRFITREPTEGLTRQQMANLM 240 +RLFA+MAQLK G TI+YISHKLDE+E +TDEVI+MRDGRFI REPT L R QMANLM Sbjct: 177 QRLFALMAQLKQQGVTIIYISHKLDEIENHTDEVIIMRDGRFIAREPTASLDRHQMANLM 236 Query: 241 VGRDLSDMFPARQAPAAEAPVLLKVDNLCVPGWADGLSFEVRAGEILGFAGLVGAGRTES 300 VGRD+SDMFP + PAA+APVLLKV+NL VPGW L FEVRAGEILGFAGLVGAGRTE+ Sbjct: 237 VGRDVSDMFPPKLMPAADAPVLLKVENLAVPGWIPDLGFEVRAGEILGFAGLVGAGRTEA 296 Query: 301 FEALFGLRARSAGAIFVHGKPVALRNPRDAMRHGMAYLSEDRKGKGLHVNLGLRENLTMS 360 EAL GLR RS G I + G+ + LR+PR AM+HG+ YLSEDRKGKGLHV+LGLRENLT+ Sbjct: 297 MEALIGLRPRSGGRIAIGGQQLDLRSPRQAMQHGLTYLSEDRKGKGLHVDLGLRENLTLM 356 Query: 361 TIDRYARPWLDVNAEKQALVDAASAFNIRTRDLDSKARMLSGGNQQKLALAKYLHSDPQV 420 T++RY+ P LD+ AEKQAL A FNIR + KARMLSGGNQQKLALAKYLH+DP+V Sbjct: 357 TLERYSHPLLDLQAEKQALARAIQDFNIRAGNPQVKARMLSGGNQQKLALAKYLHADPRV 416 Query: 421 VVLDEPTRGVDVGAKRDIYFLIHRLAAEGRAVIVISSELMELIGLCHRVAVMRNGRLQTT 480 V+LDEPTRGVDVGAKRDIYFLI RLAAEGRAVIVISSEL+ELIGLCHRVAVMR G LQTT Sbjct: 417 VILDEPTRGVDVGAKRDIYFLIQRLAAEGRAVIVISSELIELIGLCHRVAVMRAGVLQTT 476 Query: 481 LGIEHLTEEELIAHATGT 498 L LTEEELI+HATGT Sbjct: 477 LASNQLTEEELISHATGT 494 >ref|YP_003906104.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gb|ADN56813.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 495 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/499 (74%), Positives = 421/499 (84%), Gaps = 4/499 (0%) Query: 1 MSVAVSFQHVCKDFGPVRVLHDISFDLVPGRVVGLLGENGAGKSTLMKILAGYEAISDGL 60 MS+A+ F + KDFGPVRVLH +SFDL P R+ GLLGENGAGKSTLMKILAGYE + G Sbjct: 1 MSLAIRFDDIRKDFGPVRVLHGVSFDLAPARIYGLLGENGAGKSTLMKILAGYETATSGT 60 Query: 61 LLIDGQPHQFSDSRAAEACGIVLIHQEFNLAEHLTIAQNMFLGHEKRCDWPRGWLLDDDA 120 +LIDG+ QFS SR AE+ GIVLIHQEFNLAEHLTIAQNM+LGHEKR RGW +DD A Sbjct: 61 VLIDGRARQFSGSRDAESQGIVLIHQEFNLAEHLTIAQNMYLGHEKR----RGWFVDDAA 116 Query: 121 MRRDAAHYLQQVGLDLDPDTKVSQLIVAEKQLVEIARALSRQARLLIMDEPTAPLTSSET 180 MR +AA YL QVGLD PDTKV +LIVAEKQ+VEIA+ALSR+ARLLIMDEPTA LT SET Sbjct: 117 MRAEAARYLAQVGLDRAPDTKVRELIVAEKQMVEIAKALSRRARLLIMDEPTATLTPSET 176 Query: 181 ERLFAVMAQLKAAGTTILYISHKLDEVERNTDEVIVMRDGRFITREPTEGLTRQQMANLM 240 ERLF +MA+LKA G TI+YISHKLDEVER TDEVIVMRDGRF+ R T L RQQMANLM Sbjct: 177 ERLFTLMAKLKADGVTIVYISHKLDEVERITDEVIVMRDGRFVARNETAALARQQMANLM 236 Query: 241 VGRDLSDMFPARQAPAAEAPVLLKVDNLCVPGWADGLSFEVRAGEILGFAGLVGAGRTES 300 VGRD+SDMFPA+ +A APV LKV L VP W + LSFEVRAGE+LGFAGLVGAGRTE+ Sbjct: 237 VGRDVSDMFPAKITVSASAPVALKVAGLSVPDWVEDLSFEVRAGEVLGFAGLVGAGRTEA 296 Query: 301 FEALFGLRARSAGAIFVHGKPVALRNPRDAMRHGMAYLSEDRKGKGLHVNLGLRENLTMS 360 FEA+ GLR R+AG I + G V L++PRDAMRHG+ YLSEDRKGKGLHVNL L++NLT+ Sbjct: 297 FEAIIGLRKRTAGRIEIAGHSVDLKSPRDAMRHGLTYLSEDRKGKGLHVNLNLQDNLTLM 356 Query: 361 TIDRYARPWLDVNAEKQALVDAASAFNIRTRDLDSKARMLSGGNQQKLALAKYLHSDPQV 420 T++RYARP LD+ A ++AL A S F IRT DL S+ARMLSGGNQQKLALAK+L S+P V Sbjct: 357 TLERYARPLLDLKAGREALKSAVSEFGIRTGDLSSRARMLSGGNQQKLALAKFLQSEPDV 416 Query: 421 VVLDEPTRGVDVGAKRDIYFLIHRLAAEGRAVIVISSELMELIGLCHRVAVMRNGRLQTT 480 +VLDEPTRGVDVGAKRDIYFLIHRLAA+GRAVIVISSEL+ELIGLCHRVAVMR GRLQ T Sbjct: 417 IVLDEPTRGVDVGAKRDIYFLIHRLAAQGRAVIVISSELIELIGLCHRVAVMRAGRLQAT 476 Query: 481 LGIEHLTEEELIAHATGTH 499 L +EHLTEEELIAHATGTH Sbjct: 477 LTLEHLTEEELIAHATGTH 495 >ref|YP_004227235.1| ABC transporter [Burkholderia sp. CCGE1001] gb|ADX54175.1| ABC transporter related protein [Burkholderia sp. CCGE1001] Length = 495 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/499 (74%), Positives = 420/499 (84%), Gaps = 4/499 (0%) Query: 1 MSVAVSFQHVCKDFGPVRVLHDISFDLVPGRVVGLLGENGAGKSTLMKILAGYEAISDGL 60 MS+A+ F + KDFGPVRVLH +SF+L PGR+ GLLGENGAGKSTLMKILAGYE + G Sbjct: 1 MSLAIRFDDIRKDFGPVRVLHGVSFELAPGRIYGLLGENGAGKSTLMKILAGYETATSGT 60 Query: 61 LLIDGQPHQFSDSRAAEACGIVLIHQEFNLAEHLTIAQNMFLGHEKRCDWPRGWLLDDDA 120 +L+DG+ F+ SR AE+ GIVLIHQEFNLAEHLTIAQNM+LGHEKR RGW +DD A Sbjct: 61 VLVDGRAQHFNGSREAESQGIVLIHQEFNLAEHLTIAQNMYLGHEKR----RGWFVDDAA 116 Query: 121 MRRDAAHYLQQVGLDLDPDTKVSQLIVAEKQLVEIARALSRQARLLIMDEPTAPLTSSET 180 MR +AA YL QVGLD PDTKV +LIVAEKQ+VEIA+ALSR+ARLLIMDEPTA LT SET Sbjct: 117 MRAEAARYLAQVGLDKAPDTKVRELIVAEKQMVEIAKALSRRARLLIMDEPTATLTPSET 176 Query: 181 ERLFAVMAQLKAAGTTILYISHKLDEVERNTDEVIVMRDGRFITREPTEGLTRQQMANLM 240 ERLFA+MA+LKA G TI+YISHKLDEVER TDEVIVMRDGRF+ R T L RQQMANLM Sbjct: 177 ERLFALMAKLKADGVTIVYISHKLDEVERITDEVIVMRDGRFVARNETAALARQQMANLM 236 Query: 241 VGRDLSDMFPARQAPAAEAPVLLKVDNLCVPGWADGLSFEVRAGEILGFAGLVGAGRTES 300 VGRD+SDMFP + A APV LKV+ L VP W DGLSF+VRAGE+LGFAGLVGAGRTE+ Sbjct: 237 VGRDVSDMFPDKITVPATAPVALKVEGLTVPDWVDGLSFDVRAGEVLGFAGLVGAGRTEA 296 Query: 301 FEALFGLRARSAGAIFVHGKPVALRNPRDAMRHGMAYLSEDRKGKGLHVNLGLRENLTMS 360 FEA+ GLR R+AG I + G+PV L NPRDAMRHG+ YLSEDRKGKGLHVNL L++NLT+ Sbjct: 297 FEAIIGLRKRTAGRIEIAGRPVELNNPRDAMRHGLTYLSEDRKGKGLHVNLNLQDNLTLM 356 Query: 361 TIDRYARPWLDVNAEKQALVDAASAFNIRTRDLDSKARMLSGGNQQKLALAKYLHSDPQV 420 T++RY P LD+ A ++AL A S F IRT DL S+ARMLSGGNQQKLALAK+L +P V Sbjct: 357 TLERYTHPLLDLKAGREALKRAVSEFGIRTGDLASRARMLSGGNQQKLALAKFLQPEPDV 416 Query: 421 VVLDEPTRGVDVGAKRDIYFLIHRLAAEGRAVIVISSELMELIGLCHRVAVMRNGRLQTT 480 +VLDEPTRGVDVGAKRDIYFLIHRLAA+GRAVIVISSEL+ELIGLCHRVAVMR GRLQ T Sbjct: 417 IVLDEPTRGVDVGAKRDIYFLIHRLAAQGRAVIVISSELIELIGLCHRVAVMRAGRLQAT 476 Query: 481 LGIEHLTEEELIAHATGTH 499 L +EHLTEEELIAHATGTH Sbjct: 477 LTLEHLTEEELIAHATGTH 495 >ref|YP_557366.1| ABC sugar transporter, ATPase subunit [Burkholderia xenovorans LB400] gb|ABE29314.1| monosaccharide ABC transporter ATP-binding protein, CUT2 family [Burkholderia xenovorans LB400] Length = 495 Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/499 (73%), Positives = 420/499 (84%), Gaps = 4/499 (0%) Query: 1 MSVAVSFQHVCKDFGPVRVLHDISFDLVPGRVVGLLGENGAGKSTLMKILAGYEAISDGL 60 MS+A+ F + KDFGPVRVLH +SF+L PGR+ GLLGENGAGKSTLMKILAGYE + G Sbjct: 1 MSLAIRFDDIRKDFGPVRVLHGVSFELAPGRIYGLLGENGAGKSTLMKILAGYETATSGS 60 Query: 61 LLIDGQPHQFSDSRAAEACGIVLIHQEFNLAEHLTIAQNMFLGHEKRCDWPRGWLLDDDA 120 LLIDGQP QF+ SR AEA GIVLIHQEFNLAEHLTIAQNM+LGHEK+ RGW +DD A Sbjct: 61 LLIDGQPQQFNGSRDAEAQGIVLIHQEFNLAEHLTIAQNMYLGHEKK----RGWFVDDAA 116 Query: 121 MRRDAAHYLQQVGLDLDPDTKVSQLIVAEKQLVEIARALSRQARLLIMDEPTAPLTSSET 180 M +AA YL QVGL+ PDTKV +LIVAEKQ+VEIA+ALSR+ARLL+MDEPTA LT SET Sbjct: 117 MNIEAARYLAQVGLEKAPDTKVRELIVAEKQMVEIAKALSRRARLLVMDEPTATLTPSET 176 Query: 181 ERLFAVMAQLKAAGTTILYISHKLDEVERNTDEVIVMRDGRFITREPTEGLTRQQMANLM 240 ERLF +MA+LKA G T++YISHKLDEVER TDEVIVMRDGRF+ R T GL+RQQMANLM Sbjct: 177 ERLFTLMAKLKADGVTLIYISHKLDEVERITDEVIVMRDGRFVARGETAGLSRQQMANLM 236 Query: 241 VGRDLSDMFPARQAPAAEAPVLLKVDNLCVPGWADGLSFEVRAGEILGFAGLVGAGRTES 300 VGRD+SDMFP + A+APV LKV L VP W + LSF+VRAGE+LGFAGLVGAGRTE+ Sbjct: 237 VGRDVSDMFPEKITVPADAPVALKVQGLVVPDWVEDLSFDVRAGEVLGFAGLVGAGRTEA 296 Query: 301 FEALFGLRARSAGAIFVHGKPVALRNPRDAMRHGMAYLSEDRKGKGLHVNLGLRENLTMS 360 FEA+ GLR R+AG I + G+P L++PRDAMRHG+ YLSEDRKGKGLHVNL L++N+TM Sbjct: 297 FEAIIGLRKRTAGRIEIAGRPADLKSPRDAMRHGLTYLSEDRKGKGLHVNLSLQDNVTMM 356 Query: 361 TIDRYARPWLDVNAEKQALVDAASAFNIRTRDLDSKARMLSGGNQQKLALAKYLHSDPQV 420 T++RYA P LD+ A + AL A S F IRT DL S+ARMLSGGNQQKLALAK+L +P V Sbjct: 357 TLERYAHPLLDMKAGRAALTKAVSEFGIRTGDLSSRARMLSGGNQQKLALAKFLQPEPDV 416 Query: 421 VVLDEPTRGVDVGAKRDIYFLIHRLAAEGRAVIVISSELMELIGLCHRVAVMRNGRLQTT 480 +VLDEPTRGVDVGAKRDIYFLIHRLAA+GRAVIVISSEL+ELIGLCHRVAVMR GRL T Sbjct: 417 IVLDEPTRGVDVGAKRDIYFLIHRLAAQGRAVIVISSELIELIGLCHRVAVMRAGRLPAT 476 Query: 481 LGIEHLTEEELIAHATGTH 499 L +EHLTEEELIAHATGTH Sbjct: 477 LTLEHLTEEELIAHATGTH 495 >ref|YP_001894605.1| ABC transporter [Burkholderia phytofirmans PsJN] gb|ACD15381.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 495 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/499 (73%), Positives = 420/499 (84%), Gaps = 4/499 (0%) Query: 1 MSVAVSFQHVCKDFGPVRVLHDISFDLVPGRVVGLLGENGAGKSTLMKILAGYEAISDGL 60 MS+A+ F + KDFGPVRVLH +SF+L PGR+ GLLGENGAGKSTLMKILAGYE + G Sbjct: 1 MSLAIRFDDIRKDFGPVRVLHGVSFELAPGRIYGLLGENGAGKSTLMKILAGYETATSGT 60 Query: 61 LLIDGQPHQFSDSRAAEACGIVLIHQEFNLAEHLTIAQNMFLGHEKRCDWPRGWLLDDDA 120 LL+DGQ HQF SR AEA GIVLIHQEFNLAEHLTIAQNM+LGHEK+ RGW +DD A Sbjct: 61 LLVDGQAHQFIGSRDAEAQGIVLIHQEFNLAEHLTIAQNMYLGHEKK----RGWFVDDAA 116 Query: 121 MRRDAAHYLQQVGLDLDPDTKVSQLIVAEKQLVEIARALSRQARLLIMDEPTAPLTSSET 180 M +AA +L QVGL+ PDTKV +LIVAEKQ+VEIA+ALSR+ARLLIMDEPTA LT SET Sbjct: 117 MNTEAARFLAQVGLEKAPDTKVRELIVAEKQMVEIAKALSRRARLLIMDEPTATLTPSET 176 Query: 181 ERLFAVMAQLKAAGTTILYISHKLDEVERNTDEVIVMRDGRFITREPTEGLTRQQMANLM 240 ERLF +MA+LKA G TI+YISHKLDEVER TDEVIVMRDGRF+ R T GL RQQMANLM Sbjct: 177 ERLFTLMAKLKADGVTIIYISHKLDEVERITDEVIVMRDGRFVARGETAGLARQQMANLM 236 Query: 241 VGRDLSDMFPARQAPAAEAPVLLKVDNLCVPGWADGLSFEVRAGEILGFAGLVGAGRTES 300 VGR+LSDMFP + +A+AP+ LKV+ L VP W + LSF+V AGE+LGFAGLVGAGRTE+ Sbjct: 237 VGRELSDMFPDKITVSADAPLALKVEGLAVPDWVEDLSFDVHAGEVLGFAGLVGAGRTEA 296 Query: 301 FEALFGLRARSAGAIFVHGKPVALRNPRDAMRHGMAYLSEDRKGKGLHVNLGLRENLTMS 360 FEA+ GLR R+AG I V G+P L++PRDAMRHG+ YLSEDRKGKGLHVNL L++N+T+ Sbjct: 297 FEAIIGLRKRTAGRIEVAGRPADLKSPRDAMRHGITYLSEDRKGKGLHVNLSLQDNVTLM 356 Query: 361 TIDRYARPWLDVNAEKQALVDAASAFNIRTRDLDSKARMLSGGNQQKLALAKYLHSDPQV 420 T++RYA P LD+ A + AL A S F IRT DL S+ARMLSGGNQQKLALAKYL DP V Sbjct: 357 TLERYAHPLLDMKAGRAALTKAVSEFGIRTGDLSSRARMLSGGNQQKLALAKYLQPDPNV 416 Query: 421 VVLDEPTRGVDVGAKRDIYFLIHRLAAEGRAVIVISSELMELIGLCHRVAVMRNGRLQTT 480 +VLDEPTRGVDVGAKRDIYFLIHRLAA+GRAVIVISSEL+ELIGLCHRVAVMR GRLQ T Sbjct: 417 IVLDEPTRGVDVGAKRDIYFLIHRLAAQGRAVIVISSELIELIGLCHRVAVMRAGRLQAT 476 Query: 481 LGIEHLTEEELIAHATGTH 499 L ++HLTEEELIAHATGTH Sbjct: 477 LTLDHLTEEELIAHATGTH 495