BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0193.p (496 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04889303.1| ABC transporter, carbohydrate uptake transpor... 662 0.0 ref|ZP_04521811.1| ribose import ATP-binding protein RbsA 2 [Bur... 662 0.0 ref|ZP_01767345.1| ABC transporter, carbohydrate uptake transpor... 662 0.0 ref|ZP_02484276.1| ribose ABC transport system, ATP-binding prot... 662 0.0 ref|ZP_02465556.1| ribose ABC transport system, ATP-binding prot... 662 0.0 >ref|ZP_04889303.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 1655] gb|EDU10287.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 1655] Length = 493 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/497 (66%), Positives = 402/497 (80%), Gaps = 5/497 (1%) Query: 1 MAALLLEANGVKKSFQGIPALTDGRLALRPGSVHALCGGNGAGKSTFLNILMGVLRRDDG 60 M +LLEA+ V K F G+ AL DGRL+L G VHALCGGNG GKSTFLNILMG+LRRD+G Sbjct: 1 MTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEG 60 Query: 61 EIFLHGRQVDFATPAEALESRVAMITQELSPIPGMTVAENIYLGREPRTAGICVDFKTML 120 I L+GR VDFA+PAEAL SR+A+ITQELSP+PGMTVAEN+YLGREP AG+ VDF+ + Sbjct: 61 TIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALK 120 Query: 121 RQAQALLERLQFPVNPRLRMSSLSLAQVQLVEIAKAFSRDCDVMIMDEPTSVCXYYIGER 180 R+AQALL+RL F ++ M LSLAQ QLVEIAKAFS DC VMIMDEPTS IGER Sbjct: 121 RRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSA----IGER 176 Query: 181 ETEVLFNAIRSLTAQGTGIVYVSHRLSEIFQIADDYTVFRDGRFVENGRIADIDRAALVT 240 ETE LF AIR++TA G GI+YVSHRLSE+F IADDYTVFRDG +VE+GR+ADIDRA LV Sbjct: 177 ETETLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVR 236 Query: 241 AIVGRKLQTATRSRRDA-GKAVLETEGLSRNGEFNEISLRVHAGEVLGIYGLMGAGRSEY 299 AIVGR++ ++RR A G+ L+ EGL+R EF ++SL V GE+LGIYGLMG+GRSE+ Sbjct: 237 AIVGREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEF 296 Query: 300 LNCIYGLTRPDNGGIFLRGVPLPVGNPGRSIASGISLVTEDRKETGLVLTASIRDNIALS 359 LNC+YGLTRPD G L G PLP G P RSI +GI+LVTEDRK++GLVL S+++NIA++ Sbjct: 297 LNCVYGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMA 356 Query: 360 AYRRLSRLAMIDRQRVNRLAGDMVKRIRMKTSSVNLPVSSMSGGNQQKVVLARCLSTEPV 419 AYRRLSR +I R V RLA MV+R+R+K +S+ +PVS+MSGGNQQKVVLA+CLSTEPV Sbjct: 357 AYRRLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPV 416 Query: 420 CLMCDEPTRGIDEGAKREVYQLINEFAENGGAVLLVSSEAQEVLDVSDRIAVFKAGSVVA 479 L+CDEPTRGIDEGAK+E+Y+L++ FA +GGAV++VSSEA E+L +SDRIAVFK G V A Sbjct: 417 LLLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAA 476 Query: 480 MLDGHTSTQEELLHLAS 496 + G +TQE LLHLAS Sbjct: 477 VRPGDGATQESLLHLAS 493 >ref|ZP_04521811.1| ribose import ATP-binding protein RbsA 2 [Burkholderia pseudomallei MSHR346] gb|EEP50725.1| ribose import ATP-binding protein RbsA 2 [Burkholderia pseudomallei MSHR346] Length = 505 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/494 (67%), Positives = 401/494 (81%), Gaps = 5/494 (1%) Query: 4 LLLEANGVKKSFQGIPALTDGRLALRPGSVHALCGGNGAGKSTFLNILMGVLRRDDGEIF 63 +LLEA+ V K F G+ AL DGRL+L G VHALCGGNG GKSTFLNILMG+LRRD+G I Sbjct: 16 VLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEGTIR 75 Query: 64 LHGRQVDFATPAEALESRVAMITQELSPIPGMTVAENIYLGREPRTAGICVDFKTMLRQA 123 L+GR VDFA+PAEAL SR+A+ITQELSP+PGMTVAEN+YLGREP AG+ VDF+ + R+A Sbjct: 76 LNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALKRRA 135 Query: 124 QALLERLQFPVNPRLRMSSLSLAQVQLVEIAKAFSRDCDVMIMDEPTSVCXYYIGERETE 183 QALL+RL F ++ M LSLAQ QLVEIAKAFS DC VMIMDEPTS IGERETE Sbjct: 136 QALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSA----IGERETE 191 Query: 184 VLFNAIRSLTAQGTGIVYVSHRLSEIFQIADDYTVFRDGRFVENGRIADIDRAALVTAIV 243 LF AIR++TA G GI+YVSHRLSE+F IADDYTVFRDG +VE+GR+ADIDRA LV AIV Sbjct: 192 TLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRAIV 251 Query: 244 GRKLQTATRSRRDA-GKAVLETEGLSRNGEFNEISLRVHAGEVLGIYGLMGAGRSEYLNC 302 GR++ ++RR A G+ L+ EGL+R EF ++SL V GE+LGIYGLMG+GRSE+LNC Sbjct: 252 GREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFLNC 311 Query: 303 IYGLTRPDNGGIFLRGVPLPVGNPGRSIASGISLVTEDRKETGLVLTASIRDNIALSAYR 362 +YGLTRPD G L G PLP G P RSI +GI+LVTEDRK++GLVL S+++NIA++AYR Sbjct: 312 VYGLTRPDAGAATLGGKPLPRGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAAYR 371 Query: 363 RLSRLAMIDRQRVNRLAGDMVKRIRMKTSSVNLPVSSMSGGNQQKVVLARCLSTEPVCLM 422 RLSR +I R V RLA MV+R+R+K +S+ +PVS+MSGGNQQKVVLA+CLSTEPV L+ Sbjct: 372 RLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVLLL 431 Query: 423 CDEPTRGIDEGAKREVYQLINEFAENGGAVLLVSSEAQEVLDVSDRIAVFKAGSVVAMLD 482 CDEPTRGIDEGAK+E+Y+L++ FA +GGAV++VSSEA E+L +SDRIAVFK G V A+ Sbjct: 432 CDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAVRP 491 Query: 483 GHTSTQEELLHLAS 496 G +TQE LLHLAS Sbjct: 492 GDGATQESLLHLAS 505 >ref|ZP_01767345.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 305] gb|EBA47741.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 305] Length = 505 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/494 (67%), Positives = 401/494 (81%), Gaps = 5/494 (1%) Query: 4 LLLEANGVKKSFQGIPALTDGRLALRPGSVHALCGGNGAGKSTFLNILMGVLRRDDGEIF 63 +LLEA+ V K F G+ AL DGRL+L G VHALCGGNG GKSTFLNILMG+LRRD+G I Sbjct: 16 VLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEGTIR 75 Query: 64 LHGRQVDFATPAEALESRVAMITQELSPIPGMTVAENIYLGREPRTAGICVDFKTMLRQA 123 L+GR VDFA+PAEAL SR+A+ITQELSP+PGMTVAEN+YLGREP AG+ VDF+ + R+A Sbjct: 76 LNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALKRRA 135 Query: 124 QALLERLQFPVNPRLRMSSLSLAQVQLVEIAKAFSRDCDVMIMDEPTSVCXYYIGERETE 183 QALL+RL F ++ M LSLAQ QLVEIAKAFS DC VMIMDEPTS IGERETE Sbjct: 136 QALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSA----IGERETE 191 Query: 184 VLFNAIRSLTAQGTGIVYVSHRLSEIFQIADDYTVFRDGRFVENGRIADIDRAALVTAIV 243 LF AIR++TA G GI+YVSHRLSE+F IADDYTVFRDG +VE+GR+ADIDRA LV AIV Sbjct: 192 TLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRAIV 251 Query: 244 GRKLQTATRSRRDA-GKAVLETEGLSRNGEFNEISLRVHAGEVLGIYGLMGAGRSEYLNC 302 GR++ ++RR A G+ L+ EGL+R EF ++SL V GE+LGIYGLMG+GRSE+LNC Sbjct: 252 GREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFLNC 311 Query: 303 IYGLTRPDNGGIFLRGVPLPVGNPGRSIASGISLVTEDRKETGLVLTASIRDNIALSAYR 362 +YGLTRPD G L G PLP G P RSI +GI+LVTEDRK++GLVL S+++NIA++AYR Sbjct: 312 VYGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAAYR 371 Query: 363 RLSRLAMIDRQRVNRLAGDMVKRIRMKTSSVNLPVSSMSGGNQQKVVLARCLSTEPVCLM 422 RLSR +I R V RLA MV+R+R+K +S+ +PVS+MSGGNQQKVVLA+CLSTEPV L+ Sbjct: 372 RLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVLLL 431 Query: 423 CDEPTRGIDEGAKREVYQLINEFAENGGAVLLVSSEAQEVLDVSDRIAVFKAGSVVAMLD 482 CDEPTRGIDEGAK+E+Y+L++ FA +GGAV++VSSEA E+L +SDRIAVFK G V A+ Sbjct: 432 CDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAVRP 491 Query: 483 GHTSTQEELLHLAS 496 G +TQE LLHLAS Sbjct: 492 GDGATQESLLHLAS 505 >ref|ZP_02484276.1| ribose ABC transport system, ATP-binding protein [Burkholderia pseudomallei 7894] Length = 493 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/497 (66%), Positives = 402/497 (80%), Gaps = 5/497 (1%) Query: 1 MAALLLEANGVKKSFQGIPALTDGRLALRPGSVHALCGGNGAGKSTFLNILMGVLRRDDG 60 M +LLEA+ V K F G+ AL DGRL+L G VHALCGGNG GKSTFLNILMG+LRRD+G Sbjct: 1 MTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEG 60 Query: 61 EIFLHGRQVDFATPAEALESRVAMITQELSPIPGMTVAENIYLGREPRTAGICVDFKTML 120 I L+GR VDFA+PAEAL SR+A+ITQELSP+PGMTVAEN+YLGREP AG+ VDF+ + Sbjct: 61 TIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALK 120 Query: 121 RQAQALLERLQFPVNPRLRMSSLSLAQVQLVEIAKAFSRDCDVMIMDEPTSVCXYYIGER 180 R+AQALL+RL F ++ M LSLAQ QLVEIAKAFS DC VMIMDEPTS IGER Sbjct: 121 RRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSA----IGER 176 Query: 181 ETEVLFNAIRSLTAQGTGIVYVSHRLSEIFQIADDYTVFRDGRFVENGRIADIDRAALVT 240 ETE LF A+R++TA G GI+YVSHRLSE+F IADDYTVFRDG +VE+GR+ADIDRA LV Sbjct: 177 ETETLFAAVRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVR 236 Query: 241 AIVGRKLQTATRSRRDA-GKAVLETEGLSRNGEFNEISLRVHAGEVLGIYGLMGAGRSEY 299 AIVGR++ ++RR A G+ L+ EGL+R EF ++SL V GE+LGIYGLMG+GRSE+ Sbjct: 237 AIVGREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEF 296 Query: 300 LNCIYGLTRPDNGGIFLRGVPLPVGNPGRSIASGISLVTEDRKETGLVLTASIRDNIALS 359 LNC+YGLTRPD G L G PLP G P RSI +GI+LVTEDRK++GLVL S+++NIA++ Sbjct: 297 LNCVYGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMA 356 Query: 360 AYRRLSRLAMIDRQRVNRLAGDMVKRIRMKTSSVNLPVSSMSGGNQQKVVLARCLSTEPV 419 AYRRLSR +I R V RLA MV+R+R+K +S+ +PVS+MSGGNQQKVVLA+CLSTEPV Sbjct: 357 AYRRLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPV 416 Query: 420 CLMCDEPTRGIDEGAKREVYQLINEFAENGGAVLLVSSEAQEVLDVSDRIAVFKAGSVVA 479 L+CDEPTRGIDEGAK+E+Y+L++ FA +GGAV++VSSEA E+L +SDRIAVFK G V A Sbjct: 417 LLLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAA 476 Query: 480 MLDGHTSTQEELLHLAS 496 + G +TQE LLHLAS Sbjct: 477 VRPGDGATQESLLHLAS 493 >ref|ZP_02465556.1| ribose ABC transport system, ATP-binding protein [Burkholderia thailandensis MSMB43] Length = 493 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/497 (66%), Positives = 403/497 (81%), Gaps = 5/497 (1%) Query: 1 MAALLLEANGVKKSFQGIPALTDGRLALRPGSVHALCGGNGAGKSTFLNILMGVLRRDDG 60 M +LLEA+ V K F G+ AL DGRL+L G VHALCGGNG GKSTFLNILMG+LRRD+G Sbjct: 1 MTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEG 60 Query: 61 EIFLHGRQVDFATPAEALESRVAMITQELSPIPGMTVAENIYLGREPRTAGICVDFKTML 120 I L+GR VDFA+PAEAL SR+A+ITQELSP+PGMTVAEN+YLGREP A + VDF+T+ Sbjct: 61 TIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRARVVVDFRTLK 120 Query: 121 RQAQALLERLQFPVNPRLRMSSLSLAQVQLVEIAKAFSRDCDVMIMDEPTSVCXYYIGER 180 R+AQ LL+RL F ++ M LSLAQ QLVEIAKAFS DC VMIMDEPTS IGER Sbjct: 121 RRAQDLLDRLGFAIDAGAPMRRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSA----IGER 176 Query: 181 ETEVLFNAIRSLTAQGTGIVYVSHRLSEIFQIADDYTVFRDGRFVENGRIADIDRAALVT 240 ETE LF AIR++TA GTGI+YVSHRLSE+F IADDYTVFRDG +VE+GR+ADIDRA LV Sbjct: 177 ETETLFAAIRNVTAHGTGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVR 236 Query: 241 AIVGRKLQTATRSRRDA-GKAVLETEGLSRNGEFNEISLRVHAGEVLGIYGLMGAGRSEY 299 AIVGR++ ++RR A G+ L+ GL+R GEF ++SL V GE+LGIYGLMG+GRSE+ Sbjct: 237 AIVGREMPVVDKARRPAHGEPCLKVAGLARAGEFEDVSLDVRRGEILGIYGLMGSGRSEF 296 Query: 300 LNCIYGLTRPDNGGIFLRGVPLPVGNPGRSIASGISLVTEDRKETGLVLTASIRDNIALS 359 LNC+YGLTRPD G L G PLP G P RSI +GI+LVTEDRK++GLVL+ S+++NIA++ Sbjct: 297 LNCVYGLTRPDAGAATLDGKPLPHGEPARSIRAGIALVTEDRKDSGLVLSGSVQENIAMA 356 Query: 360 AYRRLSRLAMIDRQRVNRLAGDMVKRIRMKTSSVNLPVSSMSGGNQQKVVLARCLSTEPV 419 AYRRLSR +I R V RLA MV+R+R+K +S+ +PVS+MSGGNQQKVVLA+CLSTEP+ Sbjct: 357 AYRRLSRGGVIRRSLVRRLAQSMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPM 416 Query: 420 CLMCDEPTRGIDEGAKREVYQLINEFAENGGAVLLVSSEAQEVLDVSDRIAVFKAGSVVA 479 L+CDEPTRGIDEGAK+E+Y+L++ FA +GGAV++VSSEA E+L +SDRIAVFK G V A Sbjct: 417 LLLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAA 476 Query: 480 MLDGHTSTQEELLHLAS 496 + G +TQE LLHLAS Sbjct: 477 VRPGDGATQESLLHLAS 493