BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0184.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03832045.1| transcriptional activator FtrA [Pectobacteriu... 405 e-111 ref|ZP_03828137.1| transcriptional activator FtrA [Pectobacteriu... 405 e-111 ref|NP_104860.1| transcriptional activator FtrA [Mesorhizobium l... 401 e-110 ref|YP_003261725.1| transcriptional activator FtrA [Pectobacteri... 400 e-109 ref|YP_001686021.1| transcriptional activator FtrA [Caulobacter ... 393 e-107 >ref|ZP_03832045.1| transcriptional activator FtrA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 331 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/316 (59%), Positives = 241/316 (76%) Query: 19 NPLVVVVAYNGLCTFEFAIAVEVFGLDRPEMGANWYRFAVAAVDEGPLRGTAGIRFLADG 78 NPLVVV+AY+GLCTFEF IAVEVFGL RPEMG +WY+FAVA +D G +R T GI +ADG Sbjct: 3 NPLVVVLAYDGLCTFEFGIAVEVFGLPRPEMGEDWYQFAVAGLDSGAMRATGGIHVVADG 62 Query: 79 DCELIKQAGTIVIPGWRGLDAPVPQHLSEALQVAHKKGARIMSICSGVAVMAAAGLLHGR 138 EL+ QAGTI+IPGW+G D PVP HL +AL+ AH++G R++SICSGV V+AA GLL GR Sbjct: 63 GLELLTQAGTIIIPGWKGSDVPVPTHLVDALRQAHQQGTRLLSICSGVFVLAATGLLSGR 122 Query: 139 KVTLHWKQALHLAQHYPDVIVQPDVLYVDDGDILSSTGGAGGIDLCLHLIRRDFGTKAAN 198 + T HW+ + L YPD+ ++PDVLY+D+G IL+S G A GIDL LHLIRRD+G+KAAN Sbjct: 123 RATTHWRYSDTLKMQYPDINIEPDVLYIDEGTILTSAGSAAGIDLGLHLIRRDYGSKAAN 182 Query: 199 VVARRMIVTPHRDGGQAQFIEHAVPELHEAGKLGSLLDEMRAHLAKTYSIEEMARFVNMS 258 VARR++V PHRDGGQAQ+IE AVP +E +LG L+D +RA+LA+ YS+ ++A MS Sbjct: 183 QVARRLVVAPHRDGGQAQYIEKAVPVDYERSRLGPLIDHVRANLAEEYSVTKLAAISCMS 242 Query: 259 RRTFLRRFTSAMGTTPVRWLVLERLAKAVDYLENTVISIEEIARLIGFSSTSTFRQQFQK 318 RTFLRRF++A GTTP RWL+ ERL A D LENT +SIE+IA +GF + ++ R F++ Sbjct: 243 PRTFLRRFSAATGTTPARWLLAERLNTARDLLENTRLSIEKIAETVGFGTAASLRHHFRQ 302 Query: 319 RYSLSPMAYRKMFSDR 334 + L+P YR F R Sbjct: 303 QLHLTPSTYRLRFGQR 318 >ref|ZP_03828137.1| transcriptional activator FtrA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 331 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/316 (59%), Positives = 242/316 (76%) Query: 19 NPLVVVVAYNGLCTFEFAIAVEVFGLDRPEMGANWYRFAVAAVDEGPLRGTAGIRFLADG 78 NPLVVV+AY+GLCTFEF IAVE+FGL RPEMG +WY+FAVA +D G +R T GI +ADG Sbjct: 3 NPLVVVLAYDGLCTFEFGIAVEIFGLPRPEMGEDWYQFAVAGLDSGAMRATGGIHVVADG 62 Query: 79 DCELIKQAGTIVIPGWRGLDAPVPQHLSEALQVAHKKGARIMSICSGVAVMAAAGLLHGR 138 EL+ QAGTI+IPGW+G D PVP HL +AL+ AH++GAR++SICSGV V+AA GLL GR Sbjct: 63 GLELLTQAGTIIIPGWKGSDVPVPAHLVDALRQAHQQGARLLSICSGVFVLAATGLLSGR 122 Query: 139 KVTLHWKQALHLAQHYPDVIVQPDVLYVDDGDILSSTGGAGGIDLCLHLIRRDFGTKAAN 198 + T HW+ + L YPD+ ++PDVLY+D+G +L+S G A GIDL LHLIRRD+G+KAAN Sbjct: 123 RATTHWRYSDTLKMQYPDINIEPDVLYIDEGTMLTSAGSAAGIDLGLHLIRRDYGSKAAN 182 Query: 199 VVARRMIVTPHRDGGQAQFIEHAVPELHEAGKLGSLLDEMRAHLAKTYSIEEMARFVNMS 258 VARR++V PHRDGGQAQ+IE AVP +E +LG L+D +RA+LA+ YS+ ++A MS Sbjct: 183 QVARRLVVAPHRDGGQAQYIEKAVPVDYERSRLGPLIDHVRANLAEEYSVTKLAAISCMS 242 Query: 259 RRTFLRRFTSAMGTTPVRWLVLERLAKAVDYLENTVISIEEIARLIGFSSTSTFRQQFQK 318 RTFLRRF++A GTTP RWL+ ERL A D LENT +SIE+IA +GF + ++ R F++ Sbjct: 243 PRTFLRRFSAATGTTPARWLLAERLNTARDLLENTRLSIEKIAETVGFGTAASLRHHFRQ 302 Query: 319 RYSLSPMAYRKMFSDR 334 + L+P YR F R Sbjct: 303 QLDLTPSTYRLRFGQR 318 >ref|NP_104860.1| transcriptional activator FtrA [Mesorhizobium loti MAFF303099] dbj|BAB50646.1| transcriptional regulator (araC-family) [Mesorhizobium loti MAFF303099] Length = 332 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 180/314 (57%), Positives = 238/314 (75%) Query: 18 ANPLVVVVAYNGLCTFEFAIAVEVFGLDRPEMGANWYRFAVAAVDEGPLRGTAGIRFLAD 77 +N LVV +AY+GLCTFEF +A E+F L RPEMG++WYRFAVA +D G +R G+R +AD Sbjct: 12 SNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEMRAMGGVRIVAD 71 Query: 78 GDCELIKQAGTIVIPGWRGLDAPVPQHLSEALQVAHKKGARIMSICSGVAVMAAAGLLHG 137 G +LI +AGT+++PGWRG+D PVP L EAL+ A ++GARI+SICSGV V+AAAGLL G Sbjct: 72 GGPDLIGEAGTVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGVFVLAAAGLLSG 131 Query: 138 RKVTLHWKQALHLAQHYPDVIVQPDVLYVDDGDILSSTGGAGGIDLCLHLIRRDFGTKAA 197 +K T HW+ + L + YPD+ V PDVLY+D+G++L+S G A GIDLCLHL+RRDFGTKAA Sbjct: 132 KKATTHWRYSDRLREMYPDITVVPDVLYIDEGNVLTSAGSAAGIDLCLHLVRRDFGTKAA 191 Query: 198 NVVARRMIVTPHRDGGQAQFIEHAVPELHEAGKLGSLLDEMRAHLAKTYSIEEMARFVNM 257 N+VARR++V PHRDGGQAQ++E +VPE HE G+LG L+D MRA +A Y + +A M Sbjct: 192 NMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADYPVATLADLAGM 251 Query: 258 SRRTFLRRFTSAMGTTPVRWLVLERLAKAVDYLENTVISIEEIARLIGFSSTSTFRQQFQ 317 S RTFLRRF +A G TP RWL+ ERL++A LE+T + IE IA GF + +T R F+ Sbjct: 252 SERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGFGAAATLRHHFR 311 Query: 318 KRYSLSPMAYRKMF 331 ++++ +P AYR F Sbjct: 312 RQFATTPAAYRARF 325 >ref|YP_003261725.1| transcriptional activator FtrA [Pectobacterium wasabiae WPP163] gb|ACX90118.1| transcriptional regulator, AraC family [Pectobacterium wasabiae WPP163] Length = 331 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/316 (59%), Positives = 240/316 (75%) Query: 19 NPLVVVVAYNGLCTFEFAIAVEVFGLDRPEMGANWYRFAVAAVDEGPLRGTAGIRFLADG 78 NPLVV +AY+GLCTFEF IAVEVFGL RPEMG NWY+FAVA ++ G +R T GI +ADG Sbjct: 3 NPLVVALAYDGLCTFEFGIAVEVFGLPRPEMGDNWYQFAVAGLENGAMRATGGIHVVADG 62 Query: 79 DCELIKQAGTIVIPGWRGLDAPVPQHLSEALQVAHKKGARIMSICSGVAVMAAAGLLHGR 138 EL+ QAGTI+IPGW+G D VP HL +AL+ AH++GAR++SICSGV V+AA GLL GR Sbjct: 63 GLELLIQAGTIIIPGWKGSDVAVPNHLVDALRQAHQQGARLLSICSGVFVLAATGLLSGR 122 Query: 139 KVTLHWKQALHLAQHYPDVIVQPDVLYVDDGDILSSTGGAGGIDLCLHLIRRDFGTKAAN 198 + T HW+ + L YPD+ ++PDVLY+D+G IL+S G A GIDL LHLIRRD+G+KAAN Sbjct: 123 RATTHWRYSDTLKIQYPDINIEPDVLYIDEGTILTSAGSAAGIDLGLHLIRRDYGSKAAN 182 Query: 199 VVARRMIVTPHRDGGQAQFIEHAVPELHEAGKLGSLLDEMRAHLAKTYSIEEMARFVNMS 258 VARR++V PHRDGGQAQ+IE AVP +E +LG L+D +RA+LA+ YS+ ++A MS Sbjct: 183 QVARRLVVAPHRDGGQAQYIEKAVPVDYERSRLGPLIDHIRANLAEEYSVRKLATISCMS 242 Query: 259 RRTFLRRFTSAMGTTPVRWLVLERLAKAVDYLENTVISIEEIARLIGFSSTSTFRQQFQK 318 RTFLRRF++A GTTP RWL+ ERL A D LENT +SIE+IA +GF + ++ R F++ Sbjct: 243 PRTFLRRFSAATGTTPARWLLAERLNTARDLLENTRLSIEKIAETVGFGTAASLRHHFRQ 302 Query: 319 RYSLSPMAYRKMFSDR 334 + L+P YR F R Sbjct: 303 QLDLTPSTYRLRFGRR 318 >ref|YP_001686021.1| transcriptional activator FtrA [Caulobacter sp. K31] gb|ABZ73523.1| transcriptional regulator, AraC family [Caulobacter sp. K31] Length = 333 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/327 (56%), Positives = 236/327 (72%), Gaps = 1/327 (0%) Query: 6 KFVPEQLSLPKLANPLVVVVAYNGLCTFEFAIAVEVFGLDRPEMGANWYRFAVAAVDEGP 65 K +P L AN VV +AY+GLCTFEF +AVE+FGL RPEMG NWY FA AAV+ GP Sbjct: 4 KIMPNPLRSTGPANRRVVALAYDGLCTFEFGVAVELFGLPRPEMGPNWYAFATAAVEPGP 63 Query: 66 LRGTAGIRFLADGDCELIKQAGTIVIPGWRGLDAPVPQHLSEALQVAHKKGARIMSICSG 125 LRG G++ +ADG EL++ AGTI+ PGWRG D PVPQ L AL+ AH GAR+MSICSG Sbjct: 64 LRGLGGVQVVADGGLELVETAGTIIAPGWRGADKPVPQPLIAALRAAHANGARVMSICSG 123 Query: 126 VAVMAAAGLLHGRKVTLHWKQALHLAQHYPDVIVQPDVLYVDDGDILSSTGGAGGIDLCL 185 V V+AA GLL GR+ T HW+ L YPD+ VQPDVLYVD+GD+++S G A G+DL L Sbjct: 124 VFVLAATGLLAGRRATTHWRYVDKLRALYPDIDVQPDVLYVDEGDVMTSAGSAAGLDLGL 183 Query: 186 HLIRRDFGTKAANVVARRMIVTPHRDGGQAQFIEHAVPELHEAGKLGSLLDEMRAHLAKT 245 HL+RRDFG +AAN VARR+++ PHRDGGQAQFI+ VP HEAG+L +LD MRA LA+ Sbjct: 184 HLVRRDFGPEAANTVARRLVIPPHRDGGQAQFIQRPVPPPHEAGRLSPILDHMRADLARE 243 Query: 246 YSIEEMARFVNMSRRTFLRRFTSAMGTTPVRWLVLERLAKAVDYLENTVISIEEIARLIG 305 ++++ +A MS RTFLRRF +A G TP RWL+ +RLA+A D LE T +E+IA+ +G Sbjct: 244 HTVKALAEAAGMSPRTFLRRFEAATGLTPARWLLAQRLARARDLLETTSAGVEQIAQTVG 303 Query: 306 FSSTSTFRQQFQKRYSLSPMAYRKMFS 332 F + + R F+K + +P AYR F+ Sbjct: 304 FGA-AALRHHFRKSLATTPQAYRARFA 329