BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0180.p (350 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002799675.1| response regulator [Azotobacter vinelandii D... 488 e-136 ref|YP_002761371.1| two-component response regulator [Gemmatimon... 455 e-126 ref|YP_004380058.1| response regulator receiver modulated metal ... 442 e-122 ref|YP_003848009.1| response regulator receiver modulated metal ... 426 e-117 ref|ZP_08570828.1| response regulator containing a CheY-like rec... 418 e-115 >ref|YP_002799675.1| response regulator [Azotobacter vinelandii DJ] gb|ACO78700.1| response regulator [Azotobacter vinelandii DJ] Length = 356 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 238/332 (71%), Positives = 273/332 (82%), Gaps = 5/332 (1%) Query: 12 LNDSRQTLLLVDDEPTNLHVLRHTLQSDYRLLFAKSGQAALDLARSDPPDLILLDVMMPA 71 + D R TLLLVDDE TNL VLRHTLQSDYRLLFAK GQ ALDL RSD PDLILLD+MMP Sbjct: 10 MKDPRHTLLLVDDETTNLQVLRHTLQSDYRLLFAKDGQTALDLVRSDRPDLILLDIMMPG 69 Query: 72 MSGYEVCAALKQESSMAEIPVIFVTALADAENEQQGLELGAVDYITKPFSPHIVQATTSP 131 +SGYEVC ALKQ+ IPVIFVTAL++A NE+QGL+LGAVDYI+KPF+PHIVQA Sbjct: 70 LSGYEVCKALKQDPCTTAIPVIFVTALSEAANERQGLDLGAVDYISKPFNPHIVQARVRT 129 Query: 132 NLLARTLSLVRAQELQETRLKIVQCLGAAAEYKDNETGLHVIRMSNYAKIIAIAAGYSSR 191 +L SLV+A+E++ETRL+IVQCL AAE+KDNETGLHVIRMS+YA+I+A+A GYS R Sbjct: 130 HL-----SLVQAREVRETRLQIVQCLSTAAEFKDNETGLHVIRMSHYARILALAVGYSER 184 Query: 192 EANDLLHAAPMHDVGKIGIPDAILCKPGALTADEWRVMQQHSEIGAKIIGNHTSRMLRMA 251 A+DLLHAAPMHDVGKIGIPDAIL KPG LT +EW +M+QH+ IGA+IIGNH S +LRMA Sbjct: 185 AADDLLHAAPMHDVGKIGIPDAILRKPGRLTEEEWMIMRQHTVIGARIIGNHPSGLLRMA 244 Query: 252 ASIALGHHEKWDGSGYPNRLARDDIPHAARIVAIADVFDALTSVRPYKNAWSPEDAAAHI 311 A+IAL HHEKWDGSGYPN LA + IPH ARIVA+ DVFDALTS RPYK AWS E+A A I Sbjct: 245 ATIALNHHEKWDGSGYPNALAGEAIPHMARIVALVDVFDALTSGRPYKPAWSVEEAQALI 304 Query: 312 RSESGKHFDPELVEIFMECLPQILEVRAQWMD 343 R ESGKHFDPEL FM+ +P IL +R W D Sbjct: 305 RCESGKHFDPELATAFMDHIPDILRIREHWAD 336 >ref|YP_002761371.1| two-component response regulator [Gemmatimonas aurantiaca T-27] dbj|BAH38901.1| two-component response regulator [Gemmatimonas aurantiaca T-27] Length = 347 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 215/333 (64%), Positives = 267/333 (80%), Gaps = 5/333 (1%) Query: 13 NDSRQTLLLVDDEPTNLHVLRHTLQSDYRLLFAKSGQAALDLARSDPPDLILLDVMMPAM 72 D+R TLLLVDDE TNL VLRHTLQ YRLLFA+ G AL+LAR+DPPDL+L+D+MMP + Sbjct: 5 KDARPTLLLVDDESTNLQVLRHTLQDQYRLLFARDGHKALELARTDPPDLVLMDIMMPGL 64 Query: 73 SGYEVCAALKQESSMAEIPVIFVTALADAENEQQGLELGAVDYITKPFSPHIVQATTSPN 132 SGY+VC ALKQ++ IP+IFVTALADA NEQ GL+LGAVDYI+KPF+PHIV+A + Sbjct: 65 SGYDVCRALKQDAFTEHIPIIFVTALADAANEQLGLDLGAVDYISKPFNPHIVKARVRTH 124 Query: 133 LLARTLSLVRAQELQETRLKIVQCLGAAAEYKDNETGLHVIRMSNYAKIIAIAAGYSSRE 192 L SLV+A E++ TRL+IVQ LGAA E+KD+ETGLHVIRMS+Y +++A AAGY S+ Sbjct: 125 L-----SLVQANEVRLTRLQIVQSLGAAGEFKDSETGLHVIRMSHYTRVLATAAGYGSQM 179 Query: 193 ANDLLHAAPMHDVGKIGIPDAILCKPGALTADEWRVMQQHSEIGAKIIGNHTSRMLRMAA 252 A++L HAAPMHD+GKIG+PDAIL K G LT +E RVMQQH+ IG++IIG H + +LRMAA Sbjct: 180 ADELFHAAPMHDIGKIGVPDAILQKAGPLTDEERRVMQQHTVIGSRIIGEHATGLLRMAA 239 Query: 253 SIALGHHEKWDGSGYPNRLARDDIPHAARIVAIADVFDALTSVRPYKNAWSPEDAAAHIR 312 +IA HHEKWDG+GYP+RLA + IPH AR+VA+ADVFDALTS RPYK AW+ E A ++ Sbjct: 240 TIARSHHEKWDGTGYPDRLAGEAIPHIARVVAVADVFDALTSARPYKEAWTVEAALLFMQ 299 Query: 313 SESGKHFDPELVEIFMECLPQILEVRAQWMDED 345 E G HFDPELV+ F CLP+I ++RA W D + Sbjct: 300 QERGSHFDPELVDAFCHCLPEISQIRACWADTE 332 >ref|YP_004380058.1| response regulator receiver modulated metal dependent phosphohydrolase [Pseudomonas mendocina NK-01] gb|AEB58306.1| response regulator receiver modulated metal dependent phosphohydrolase [Pseudomonas mendocina NK-01] Length = 334 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/328 (65%), Positives = 257/328 (78%), Gaps = 5/328 (1%) Query: 14 DSRQTLLLVDDEPTNLHVLRHTLQSDYRLLFAKSGQAALDLARSDPPDLILLDVMMPAMS 73 D+R LLLVDDEPTNL VLRH LQ DYRLLFAK G AL++A + PDLILLDVMMP M+ Sbjct: 6 DTRPLLLLVDDEPTNLQVLRHILQDDYRLLFAKEGARALEMAERELPDLILLDVMMPGMT 65 Query: 74 GYEVCAALKQESSMAEIPVIFVTALADAENEQQGLELGAVDYITKPFSPHIVQATTSPNL 133 GYEVC ALK + IPVIF+TAL D ++E +G E+GAVDYITKP SP IV+A +L Sbjct: 66 GYEVCEALKANPLLQAIPVIFITALGDVDDETRGFEVGAVDYITKPVSPPIVRARVRTHL 125 Query: 134 LARTLSLVRAQELQETRLKIVQCLGAAAEYKDNETGLHVIRMSNYAKIIAIAAGYSSREA 193 SLV EL++TRL+IVQ LG AAEYKDNETGLHVIRMS+++K++A+AAG+S A Sbjct: 126 -----SLVGVDELRQTRLQIVQRLGMAAEYKDNETGLHVIRMSHFSKVLALAAGFSESAA 180 Query: 194 NDLLHAAPMHDVGKIGIPDAILCKPGALTADEWRVMQQHSEIGAKIIGNHTSRMLRMAAS 253 +LL+AAPMHDVGKIGIPDA+L KPG L EW+VM+QH EIGA+IIG H+S +LR A Sbjct: 181 EELLNAAPMHDVGKIGIPDAVLRKPGKLDDQEWQVMRQHVEIGARIIGEHSSGLLRTAQR 240 Query: 254 IALGHHEKWDGSGYPNRLARDDIPHAARIVAIADVFDALTSVRPYKNAWSPEDAAAHIRS 313 IAL HHEKWDGSGYPN L +DIP RIVAIADVFDALTSVRPYK AW E+A A +R Sbjct: 241 IALSHHEKWDGSGYPNGLRGEDIPLEGRIVAIADVFDALTSVRPYKQAWPVEEAVAFLRE 300 Query: 314 ESGKHFDPELVEIFMECLPQILEVRAQW 341 +SG+HFDP LVE+F+ CLP+IL ++ +W Sbjct: 301 QSGRHFDPRLVELFIGCLPEILIIKERW 328 >ref|YP_003848009.1| response regulator receiver modulated metal dependent phosphohydrolase [Gallionella capsiferriformans ES-2] gb|ADL56245.1| response regulator receiver modulated metal dependent phosphohydrolase [Gallionella capsiferriformans ES-2] Length = 331 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/330 (62%), Positives = 257/330 (77%), Gaps = 5/330 (1%) Query: 15 SRQTLLLVDDEPTNLHVLRHTLQSDYRLLFAKSGQAALDLARSDPPDLILLDVMMPAMSG 74 +R+TLLLVDDEP+NLHVL+ L +DY+L+FAK G+ AL LAR PDLILLDVMMP +SG Sbjct: 3 TRKTLLLVDDEPSNLHVLKQILSNDYQLIFAKDGEKALQLAREKIPDLILLDVMMPELSG 62 Query: 75 YEVCAALKQESSMAEIPVIFVTALADAENEQQGLELGAVDYITKPFSPHIVQATTSPNLL 134 YEVCAALK + ++IPVIF++AL D +E G E+GAVDYITKP +P IV+A + Sbjct: 63 YEVCAALKSDRKTSKIPVIFISALNDVLDETHGFEVGAVDYITKPVNPAIVRAR-----V 117 Query: 135 ARTLSLVRAQELQETRLKIVQCLGAAAEYKDNETGLHVIRMSNYAKIIAIAAGYSSREAN 194 A LSLVR +EL+ T+L+I+ LG AAEY+DNETGLHVIRMS+Y++++A+AAG+S A+ Sbjct: 118 ATHLSLVRTEELEYTQLEIIHRLGRAAEYRDNETGLHVIRMSHYSRLLALAAGFSELAAD 177 Query: 195 DLLHAAPMHDVGKIGIPDAILCKPGALTADEWRVMQQHSEIGAKIIGNHTSRMLRMAASI 254 L AAPMHDVGKIGIPD IL KPG+L +EW+VM+ H E+GA+IIG H S +L+ A I Sbjct: 178 RLFQAAPMHDVGKIGIPDRILLKPGSLDEEEWKVMRTHPEVGAQIIGEHDSALLKEAKVI 237 Query: 255 ALGHHEKWDGSGYPNRLARDDIPHAARIVAIADVFDALTSVRPYKNAWSPEDAAAHIRSE 314 +L HHEKWDGSGYPN+L ++IP RIVAI DVFDALT+ RPYK AWS EDA A I E Sbjct: 238 SLTHHEKWDGSGYPNQLRGEEIPLVGRIVAIVDVFDALTTERPYKKAWSVEDALALINRE 297 Query: 315 SGKHFDPELVEIFMECLPQILEVRAQWMDE 344 SGKHFDP LV +FM+ LP +LEV+ +W +E Sbjct: 298 SGKHFDPALVGLFMKILPAVLEVKHRWAEE 327 >ref|ZP_08570828.1| response regulator containing a CheY-like receiver domain and an HD-GYP domain protein [Rheinheimera sp. A13L] gb|EGM77663.1| response regulator containing a CheY-like receiver domain and an HD-GYP domain protein [Rheinheimera sp. A13L] Length = 326 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/326 (61%), Positives = 254/326 (77%), Gaps = 5/326 (1%) Query: 16 RQTLLLVDDEPTNLHVLRHTLQSDYRLLFAKSGQAALDLARSDPPDLILLDVMMPAMSGY 75 +Q+LLLVDDEPTNL VLR LQ YRL FAKSG+ AL L + + PDLILLDVMMP ++G+ Sbjct: 4 KQSLLLVDDEPTNLRVLRTVLQEQYRLFFAKSGEEALHLVQKEQPDLILLDVMMPGLTGF 63 Query: 76 EVCAALKQESSMAEIPVIFVTALADAENEQQGLELGAVDYITKPFSPHIVQATTSPNLLA 135 +VCA LK + + IPVIFVTAL D +E +G E+GAVDYITKP SP +V+A +L Sbjct: 64 DVCARLKANPATSAIPVIFVTALKDEMDETKGFEVGAVDYITKPISPAVVRARVKTHL-- 121 Query: 136 RTLSLVRAQELQETRLKIVQCLGAAAEYKDNETGLHVIRMSNYAKIIAIAAGYSSREAND 195 SLV+AQEL++TRL+++Q LG AAEYKDNETGLHV+RMS+Y++++A+A G+S ++A D Sbjct: 122 ---SLVQAQELKQTRLQVIQRLGRAAEYKDNETGLHVMRMSHYSQVLALAYGFSEQKAED 178 Query: 196 LLHAAPMHDVGKIGIPDAILCKPGALTADEWRVMQQHSEIGAKIIGNHTSRMLRMAASIA 255 LLHAAPMHD+GKIGI D+IL KPG LT DE+ MQ+H IGA+IIG+ S +L+MA ++A Sbjct: 179 LLHAAPMHDIGKIGIADSILLKPGKLTTDEYTEMQKHPLIGAEIIGDCESDLLKMAKAVA 238 Query: 256 LGHHEKWDGSGYPNRLARDDIPHAARIVAIADVFDALTSVRPYKNAWSPEDAAAHIRSES 315 L HHEKWDG+GYP L + IP ARIVA++DVFDALTS RPYK AWS ED HIR + Sbjct: 239 LYHHEKWDGTGYPFGLTGEQIPVEARIVALSDVFDALTSARPYKQAWSIEDTLQHIRQQK 298 Query: 316 GKHFDPELVEIFMECLPQILEVRAQW 341 G+HF+P+LV++ E L QILE+R +W Sbjct: 299 GRHFEPKLVDLLDENLQQILEIRQRW 324