BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0175.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753516.1| pyridoxine 5'-phosphate synthase [Collimonas... 428 e-118 ref|YP_001100325.1| pyridoxine 5'-phosphate synthase [Herminiimo... 409 e-112 ref|ZP_04579330.1| pyridoxine 5-phosphate synthase [Oxalobacter ... 384 e-105 ref|YP_003775355.1| pyridoxal phosphate biosynthetic protein [He... 384 e-105 ref|ZP_04577193.1| pyridoxine 5-phosphate synthase [Oxalobacter ... 378 e-103 >ref|YP_004753516.1| pyridoxine 5'-phosphate synthase [Collimonas fungivorans Ter331] gb|AEK62693.1| Pyridoxine 5'-phosphate synthase [Collimonas fungivorans Ter331] Length = 253 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/251 (81%), Positives = 227/251 (90%) Query: 1 MSFLNPVGPAIELGINIDHVATLRNARGTTYPDPIQAALQAEEAGADAITLHLREDRRHI 60 MS+LNP I+LG+NIDHVATLRNARGTTYPDP+QAALQAEEAGAD ITLHLREDRRHI Sbjct: 1 MSYLNPTSAVIDLGVNIDHVATLRNARGTTYPDPLQAALQAEEAGADVITLHLREDRRHI 60 Query: 61 RDADVEAIRPLLRTRMNLEAAVTSEMIDFSCRIKPQDSCLVPEKRTEITTEGGLDVVTHF 120 +DADVE IRP LRTRMNLEAAVT EMIDFSC+IKP+DSCLVPE+R E+TTEGGLDVV +F Sbjct: 61 KDADVEIIRPQLRTRMNLEAAVTQEMIDFSCKIKPEDSCLVPERRHELTTEGGLDVVKYF 120 Query: 121 AQVQAAVKQLQAEGIRVSLFIDPDDEQIKAAAETGAPVIELHTGRYAEAHDQAEMAKELE 180 QVQAAV+QLQAEGIRVSLFIDP+ +QI+AAAE GAPVIELHTGRYAEAHD+A ELE Sbjct: 121 TQVQAAVRQLQAEGIRVSLFIDPEADQIQAAAEIGAPVIELHTGRYAEAHDEAGQRSELE 180 Query: 181 RVRAGVLEGIRRGLKVNAGHGLHYTNVQAIAAIPDIAELNIGHAIVAQAVFVGWHKAVSD 240 RV+ V EG++RGLKVNAGHGLHYTN QAIAAIPDIAELNIGHAIVA AVFVGW AVS+ Sbjct: 181 RVQIAVQEGVKRGLKVNAGHGLHYTNTQAIAAIPDIAELNIGHAIVAHAVFVGWKAAVSE 240 Query: 241 MKAIMLRARLD 251 MKA+M++ARLD Sbjct: 241 MKALMVKARLD 251 >ref|YP_001100325.1| pyridoxine 5'-phosphate synthase [Herminiimonas arsenicoxydans] emb|CAL62202.1| Pyridoxine 5'-phosphate synthase (PNP synthase) [Herminiimonas arsenicoxydans] Length = 255 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/250 (79%), Positives = 219/250 (87%) Query: 1 MSFLNPVGPAIELGINIDHVATLRNARGTTYPDPIQAALQAEEAGADAITLHLREDRRHI 60 MSFL P I+LGINIDHVATLRNARGT YP P+QAALQAEEAGADAITLHLREDRRHI Sbjct: 1 MSFLQPQSSIIDLGINIDHVATLRNARGTVYPYPLQAALQAEEAGADAITLHLREDRRHI 60 Query: 61 RDADVEAIRPLLRTRMNLEAAVTSEMIDFSCRIKPQDSCLVPEKRTEITTEGGLDVVTHF 120 RDADVE IRP LRTRMNLE+AVTSEMIDF+CRIKPQD CLVPE+R E+TTEGGLD+V +F Sbjct: 61 RDADVELIRPQLRTRMNLESAVTSEMIDFACRIKPQDVCLVPERREEVTTEGGLDIVKYF 120 Query: 121 AQVQAAVKQLQAEGIRVSLFIDPDDEQIKAAAETGAPVIELHTGRYAEAHDQAEMAKELE 180 ++V AA++QLQ EGIRVSLFID D QI+AAAE GAPVIELHTGRYA+AHD+A EL+ Sbjct: 121 SEVSAAIRQLQGEGIRVSLFIDADVAQIQAAAEAGAPVIELHTGRYADAHDEAGQQMELQ 180 Query: 181 RVRAGVLEGIRRGLKVNAGHGLHYTNVQAIAAIPDIAELNIGHAIVAQAVFVGWHKAVSD 240 RV+ GV EG++RGLKVNAGHGLHYTNVQAIAAI DIAELNIGHAIVA AVFVGW AV + Sbjct: 181 RVKQGVHEGVKRGLKVNAGHGLHYTNVQAIAAIQDIAELNIGHAIVAHAVFVGWQNAVRE 240 Query: 241 MKAIMLRARL 250 MKAIM ARL Sbjct: 241 MKAIMTAARL 250 >ref|ZP_04579330.1| pyridoxine 5-phosphate synthase [Oxalobacter formigenes OXCC13] gb|EEO30303.1| pyridoxine 5-phosphate synthase [Oxalobacter formigenes OXCC13] Length = 254 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/253 (74%), Positives = 216/253 (85%) Query: 1 MSFLNPVGPAIELGINIDHVATLRNARGTTYPDPIQAALQAEEAGADAITLHLREDRRHI 60 MSFLNP GP IELG+NIDH+ATLRNARGTTYPDP++AA+ AE+AGADAITLHLREDRRHI Sbjct: 1 MSFLNPGGPVIELGVNIDHIATLRNARGTTYPDPVKAAVMAEQAGADAITLHLREDRRHI 60 Query: 61 RDADVEAIRPLLRTRMNLEAAVTSEMIDFSCRIKPQDSCLVPEKRTEITTEGGLDVVTHF 120 +DADV AIRPLL TRMNLE+A+T EMIDF+C IKP D CLVPE+R E+TTEGGLDVV F Sbjct: 61 KDADVRAIRPLLVTRMNLESAITPEMIDFACDIKPHDVCLVPERREELTTEGGLDVVRSF 120 Query: 121 AQVQAAVKQLQAEGIRVSLFIDPDDEQIKAAAETGAPVIELHTGRYAEAHDQAEMAKELE 180 V +AV++L GIRVSLFIDP++EQI AA ETGAPVIELHTGRYA A D++ + ELE Sbjct: 121 DIVASAVERLTDAGIRVSLFIDPEEEQIIAAHETGAPVIELHTGRYANAFDESSLRHELE 180 Query: 181 RVRAGVLEGIRRGLKVNAGHGLHYTNVQAIAAIPDIAELNIGHAIVAQAVFVGWHKAVSD 240 RV+AGV EGI+ GLKVNAGHGLHY NV IAAI IAELNIGHAIVAQAVF GW KA+ D Sbjct: 181 RVKAGVEEGIKNGLKVNAGHGLHYANVLPIAAIDGIAELNIGHAIVAQAVFDGWEKAIRD 240 Query: 241 MKAIMLRARLDAT 253 MKA++++AR+ T Sbjct: 241 MKALLVQARIPET 253 >ref|YP_003775355.1| pyridoxal phosphate biosynthetic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63447.1| pyridoxal phosphate biosynthetic protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/252 (80%), Positives = 226/252 (89%) Query: 1 MSFLNPVGPAIELGINIDHVATLRNARGTTYPDPIQAALQAEEAGADAITLHLREDRRHI 60 MSFL P GPAIELGINIDHVATLRNARGT YPDPI+AAL+AEEAGADAITLHLREDRRHI Sbjct: 1 MSFLQPAGPAIELGINIDHVATLRNARGTRYPDPIRAALEAEEAGADAITLHLREDRRHI 60 Query: 61 RDADVEAIRPLLRTRMNLEAAVTSEMIDFSCRIKPQDSCLVPEKRTEITTEGGLDVVTHF 120 RD DV+AIRPLL+TRMNLEAAVT EMIDF+C I+PQD CLVPEKRTE+TTEGGLDVV HF Sbjct: 61 RDDDVKAIRPLLQTRMNLEAAVTREMIDFACFIRPQDVCLVPEKRTEVTTEGGLDVVGHF 120 Query: 121 AQVQAAVKQLQAEGIRVSLFIDPDDEQIKAAAETGAPVIELHTGRYAEAHDQAEMAKELE 180 A VQAA++QLQ E IRVSLFID D +QIKAAAE+GAPVIELHTGRYA+A + E +ELE Sbjct: 121 ADVQAAIRQLQQEQIRVSLFIDADVQQIKAAAESGAPVIELHTGRYADATSEQEQQEELE 180 Query: 181 RVRAGVLEGIRRGLKVNAGHGLHYTNVQAIAAIPDIAELNIGHAIVAQAVFVGWHKAVSD 240 R+R V EG++ GLKVNAGHGLHYTNVQAIAAIP+IAELNIGHA+VA AVF GW AVS+ Sbjct: 181 RIRLAVQEGVKLGLKVNAGHGLHYTNVQAIAAIPEIAELNIGHAVVAHAVFAGWRNAVSE 240 Query: 241 MKAIMLRARLDA 252 MKAIM++ARL+A Sbjct: 241 MKAIMIKARLEA 252 >ref|ZP_04577193.1| pyridoxine 5-phosphate synthase [Oxalobacter formigenes HOxBLS] gb|EEO28155.1| pyridoxine 5-phosphate synthase [Oxalobacter formigenes HOxBLS] Length = 262 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/249 (73%), Positives = 211/249 (84%) Query: 1 MSFLNPVGPAIELGINIDHVATLRNARGTTYPDPIQAALQAEEAGADAITLHLREDRRHI 60 MSF+ P GP IELG+NIDH+ATLRNARGT+YPDP+ AAL AEEAGADAITLHLREDRRHI Sbjct: 1 MSFIEPNGPGIELGVNIDHIATLRNARGTSYPDPVVAALMAEEAGADAITLHLREDRRHI 60 Query: 61 RDADVEAIRPLLRTRMNLEAAVTSEMIDFSCRIKPQDSCLVPEKRTEITTEGGLDVVTHF 120 RDADV AIRPLL TRMNLE+A+TSEMIDF+C I+PQD CLVPE+R E+TTEGGLD+V +F Sbjct: 61 RDADVRAIRPLLATRMNLESAMTSEMIDFACDIRPQDVCLVPERREELTTEGGLDIVRYF 120 Query: 121 AQVQAAVKQLQAEGIRVSLFIDPDDEQIKAAAETGAPVIELHTGRYAEAHDQAEMAKELE 180 VQ+AV++L GIRVSLFIDPD+EQI A+ E GAPVIELHTGRYA A D+A ELE Sbjct: 121 DIVQSAVERLTQAGIRVSLFIDPDEEQIIASHEAGAPVIELHTGRYANAFDEASREHELE 180 Query: 181 RVRAGVLEGIRRGLKVNAGHGLHYTNVQAIAAIPDIAELNIGHAIVAQAVFVGWHKAVSD 240 RVR GV EGI GLKVNAGHGLHY NV IA I IAELNIGH+IV++AVF GW KA++D Sbjct: 181 RVRQGVKEGIGHGLKVNAGHGLHYENVVPIAEIEGIAELNIGHSIVSRAVFTGWKKAIAD 240 Query: 241 MKAIMLRAR 249 MKA+++ AR Sbjct: 241 MKALIVEAR 249