BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0173.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775354.1| DNA repair protein [Herbaspirillum seropedic... 400 e-109 ref|YP_001353062.1| DNA repair protein RecO [Janthinobacterium s... 379 e-103 ref|YP_001100326.1| DNA repair protein RecO [Herminiimonas arsen... 372 e-101 ref|YP_004753517.1| DNA recombination and repair protein [Collim... 371 e-101 ref|ZP_08275733.1| DNA recombination and repair protein RecO [Ox... 363 8e-99 >ref|YP_003775354.1| DNA repair protein [Herbaspirillum seropedicae SmR1] gb|ADJ63446.1| DNA repair protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/226 (85%), Positives = 206/226 (91%) Query: 1 VLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKSEVRT 60 VLHSYPYKETSLI+DVFSRDHGRVALVAKGAKRPHSKLRG LQTFQPLS+SWSGKSEVRT Sbjct: 61 VLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKSEVRT 120 Query: 61 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVSTLNQLAHGESTPI 120 LT AEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYV+TLN+LAHGE+ PI Sbjct: 121 LTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVATLNKLAHGENAPI 180 Query: 121 VLRKFERALLKETGVAGDWTVCVTNGKPVAPDDTYVVDPEQGVRFPRLSDAGPKVSGKTL 180 VLR+FER LLK+TGVAG+W+ CV +GK V PD YVVDPEQG R RLSD PKVSGKTL Sbjct: 181 VLRQFERILLKQTGVAGNWSHCVVSGKTVRPDLIYVVDPEQGTRPERLSDRAPKVSGKTL 240 Query: 181 LDMEKEDYSDATTQSQSKLLMRSLLSHHLGGAQLNTRQILIDLSQL 226 LDME+EDYSD TTQ QSK LMR LL+HHLGGAQLNTRQILIDL QL Sbjct: 241 LDMEREDYSDPTTQLQSKFLMRYLLAHHLGGAQLNTRQILIDLMQL 286 >ref|YP_001353062.1| DNA repair protein RecO [Janthinobacterium sp. Marseille] gb|ABR88659.1| RecO DNA repair protein [Janthinobacterium sp. Marseille] Length = 287 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/226 (81%), Positives = 197/226 (87%) Query: 1 VLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKSEVRT 60 VLHSYPYKETSLIVDVFSRDHGR+ALVAKGAKRPHSKLRGVLQTFQPLSV WSGK+EVRT Sbjct: 62 VLHSYPYKETSLIVDVFSRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVGWSGKAEVRT 121 Query: 61 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVSTLNQLAHGESTPI 120 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAR+D HPALFDHYVS LNQLAH E PI Sbjct: 122 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDPHPALFDHYVSALNQLAHDEPAPI 181 Query: 121 VLRKFERALLKETGVAGDWTVCVTNGKPVAPDDTYVVDPEQGVRFPRLSDAGPKVSGKTL 180 VLRKFERALLKETGVA DW VC +GK + + YV+DPE+G R R +D P+VSGKTL Sbjct: 182 VLRKFERALLKETGVASDWRVCTASGKAIVLEQIYVLDPERGPRPARPADVWPRVSGKTL 241 Query: 181 LDMEKEDYSDATTQSQSKLLMRSLLSHHLGGAQLNTRQILIDLSQL 226 LDME EDY+D TQ+QSK LMR LL+HHL GA LNTRQILIDL QL Sbjct: 242 LDMENEDYTDTQTQTQSKFLMRFLLAHHLNGAPLNTRQILIDLLQL 287 >ref|YP_001100326.1| DNA repair protein RecO [Herminiimonas arsenicoxydans] emb|CAL62203.1| DNA repair protein recO (Recombination protein O) [Herminiimonas arsenicoxydans] Length = 284 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/226 (80%), Positives = 196/226 (86%) Query: 1 VLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKSEVRT 60 VLHSYPYKETSLIVDVF+RDHGR+ALVAKGAKRPHSKLRGVLQTFQPLSVSWSGK+EVRT Sbjct: 59 VLHSYPYKETSLIVDVFTRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKAEVRT 118 Query: 61 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVSTLNQLAHGESTPI 120 LT+AEWVGGLLPLEKSALLCGFYLNELLVKLLAR+D+HPALF+HYVS LNQLAH E I Sbjct: 119 LTSAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDSHPALFNHYVSALNQLAHDEPAAI 178 Query: 121 VLRKFERALLKETGVAGDWTVCVTNGKPVAPDDTYVVDPEQGVRFPRLSDAGPKVSGKTL 180 VLRKFERALLKE+GV+GDW +C P+ YVVDPE+G R R +D P V+GKTL Sbjct: 179 VLRKFERALLKESGVSGDWKICTATRNPLLGGINYVVDPERGPRPARPADTWPHVAGKTL 238 Query: 181 LDMEKEDYSDATTQSQSKLLMRSLLSHHLGGAQLNTRQILIDLSQL 226 LDMEKEDYSDA TQ QSK LMR LL+HHL GA LNTRQILIDL QL Sbjct: 239 LDMEKEDYSDAATQMQSKFLMRFLLAHHLNGAPLNTRQILIDLLQL 284 >ref|YP_004753517.1| DNA recombination and repair protein [Collimonas fungivorans Ter331] gb|AEK62694.1| DNA recombination and repair protein [Collimonas fungivorans Ter331] Length = 284 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/226 (78%), Positives = 203/226 (89%) Query: 1 VLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKSEVRT 60 VLHSYP++ETSLI+DVFSRD+GR+ALVAKGAKRP SKLRGVLQTFQPLS+SWSGKSE+RT Sbjct: 59 VLHSYPHRETSLIIDVFSRDYGRIALVAKGAKRPLSKLRGVLQTFQPLSLSWSGKSEIRT 118 Query: 61 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVSTLNQLAHGESTPI 120 L AAEWVGGLLPLEKSALLCGFYLNELLVKL+AR+D H ALFDHYV+TLNQLAH E PI Sbjct: 119 LIAAEWVGGLLPLEKSALLCGFYLNELLVKLVARDDPHAALFDHYVTTLNQLAHQEPAPI 178 Query: 121 VLRKFERALLKETGVAGDWTVCVTNGKPVAPDDTYVVDPEQGVRFPRLSDAGPKVSGKTL 180 VLR+FERALLK+TGVAGD+T C ++ +PV P + YVVDPE+G R R +D+ P+VSGKTL Sbjct: 179 VLRQFERALLKQTGVAGDFTRCTSSRQPVDPVENYVVDPERGPRIARAADSWPRVSGKTL 238 Query: 181 LDMEKEDYSDATTQSQSKLLMRSLLSHHLGGAQLNTRQILIDLSQL 226 LDME+EDYSD TQ+QSK+LMR LL+HHLGGA LNTRQILIDL QL Sbjct: 239 LDMEREDYSDVVTQAQSKVLMRFLLAHHLGGAPLNTRQILIDLMQL 284 >ref|ZP_08275733.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] gb|EGF30797.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 363 bits (933), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 173/226 (76%), Positives = 198/226 (87%) Query: 1 VLHSYPYKETSLIVDVFSRDHGRVALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKSEVRT 60 VLHSYP+KETSLI+DVF+R+HGR+ALVAKGAKRPHS LRGVLQTFQPLS+SW+GKSE+RT Sbjct: 39 VLHSYPHKETSLIIDVFTREHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWTGKSEIRT 98 Query: 61 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVSTLNQLAHGESTPI 120 LTAAEWVGGLLPLEKSALLCGFYLNELLVKL+AR+D HP LFDHYVS LNQLAHGE+ I Sbjct: 99 LTAAEWVGGLLPLEKSALLCGFYLNELLVKLIARDDPHPGLFDHYVSALNQLAHGEAATI 158 Query: 121 VLRKFERALLKETGVAGDWTVCVTNGKPVAPDDTYVVDPEQGVRFPRLSDAGPKVSGKTL 180 VLRKFE +L+K+TGVA D ++C +PV P +YVVDPE+GVR R SD P+VSG+TL Sbjct: 159 VLRKFELSLMKQTGVAADLSLCSGTREPVVPTSSYVVDPERGVRLARPSDIWPRVSGQTL 218 Query: 181 LDMEKEDYSDATTQSQSKLLMRSLLSHHLGGAQLNTRQILIDLSQL 226 LDME+EDY+ TTQSQSK LMR LL+H LGG LNTRQILIDL+QL Sbjct: 219 LDMEREDYAGTTTQSQSKFLMRFLLAHQLGGVPLNTRQILIDLTQL 264