BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0136.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775322.1| ferredoxin protein [Herbaspirillum seropedic...   181   2e-44
ref|YP_004753365.1| ferredoxin [Collimonas fungivorans Ter331] >...   175   2e-42
ref|YP_002004647.1| ferredoxin [Cupriavidus taiwanensis LMG 1942...   157   4e-37
ref|YP_003748064.1| Ferredoxin 1 [Ralstonia solanacearum CFBP295...   153   7e-36
ref|YP_294841.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralston...   152   2e-35

>ref|YP_003775322.1| ferredoxin protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63414.1| ferredoxin protein [Herbaspirillum seropedicae SmR1]
          Length = 112

 Score =  181 bits (460), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/108 (75%), Positives = 94/108 (87%)

Query: 1   MPFVVTDSCIACKYTDCVSVCPMDCFVEGPNFLAIDPDGCIDCSMCVPECPVGAIYNETD 60
           MPFVVTDSCI CKYTDCVSVCPMDCFVEGPNFL IDPDGCIDCSMCVPECPVGAIYN TD
Sbjct: 1   MPFVVTDSCIQCKYTDCVSVCPMDCFVEGPNFLVIDPDGCIDCSMCVPECPVGAIYNATD 60

Query: 61  LPEGLRHFTELNAKLAKHPGWKPITQAQAPMPDHAQWREVEGKIDMLK 108
           LP  L HF +LNA+L++ PGWKPITQA+ P+P H +W++V  K+ +L+
Sbjct: 61  LPATLAHFEQLNARLSRQPGWKPITQAKPPLPGHEKWKDVADKLPLLE 108


>ref|YP_004753365.1| ferredoxin [Collimonas fungivorans Ter331]
 gb|AEK62542.1| Ferredoxin [Collimonas fungivorans Ter331]
          Length = 110

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 91/110 (82%)

Query: 1   MPFVVTDSCIACKYTDCVSVCPMDCFVEGPNFLAIDPDGCIDCSMCVPECPVGAIYNETD 60
           MPFVVTDSCI CKYTDCV VCPMDCF +GPNFL I P+ CIDCSMCVPECPVGAIYN+ D
Sbjct: 1   MPFVVTDSCIRCKYTDCVEVCPMDCFRQGPNFLVIVPEDCIDCSMCVPECPVGAIYNQAD 60

Query: 61  LPEGLRHFTELNAKLAKHPGWKPITQAQAPMPDHAQWREVEGKIDMLKTS 110
           LP+  RHF E+NA+LA HP WKPIT++Q P+PDH  WREV  K++ L+ +
Sbjct: 61  LPDEQRHFAEINARLAAHPDWKPITRSQPPLPDHEAWREVANKLEFLEQA 110


>ref|YP_002004647.1| ferredoxin [Cupriavidus taiwanensis LMG 19424]
 emb|CAQ68578.1| putative FERREDOXIN [Cupriavidus taiwanensis LMG 19424]
          Length = 109

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query: 1   MPFVVTDSCIACKYTDCVSVCPMDCFVEGPNFLAIDPDGCIDCSMCVPECPVGAIYNETD 60
           M FVVTD+CI C++TDCV VCPM CF EGPNFLAIDPD CIDCSMCVP CPVGAIY+E D
Sbjct: 1   MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60

Query: 61  LPEGLRHFTELNAKLAKHPGWKPITQAQAPMPDHAQWREVEGKIDMLK 108
           LPE  RHF  LNA+L++ P W P+TQA+ P+PDH QW     ++ +L+
Sbjct: 61  LPEDQRHFLALNAELSRRPDWLPLTQAKGPLPDHEQWAGHPDRLSLLR 108


>ref|YP_003748064.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957]
 emb|CBJ53671.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957]
          Length = 116

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 82/107 (76%)

Query: 1   MPFVVTDSCIACKYTDCVSVCPMDCFVEGPNFLAIDPDGCIDCSMCVPECPVGAIYNETD 60
           MP+VVT SCI CKYTDCV+VCPMDCF  GPNFL IDPD CIDCS+C PECPVGAIY E+D
Sbjct: 1   MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAESD 60

Query: 61  LPEGLRHFTELNAKLAKHPGWKPITQAQAPMPDHAQWREVEGKIDML 107
           +P   R F  LNA+L++ P W  +TQ Q P+ DHA+W +V+ K D L
Sbjct: 61  VPADQREFIALNAQLSRRPDWPRLTQVQPPLADHARWAQVKDKRDTL 107


>ref|YP_294841.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134]
 gb|AAZ59997.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Ralstonia eutropha
           JMP134]
          Length = 109

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 83/107 (77%)

Query: 1   MPFVVTDSCIACKYTDCVSVCPMDCFVEGPNFLAIDPDGCIDCSMCVPECPVGAIYNETD 60
           M FVVTD+CI C++TDCV VCPM CF EGPNFLAIDPD CIDCSMCVP CPVGAIY+E D
Sbjct: 1   MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60

Query: 61  LPEGLRHFTELNAKLAKHPGWKPITQAQAPMPDHAQWREVEGKIDML 107
           LPE  RHF  +NA+LA+ P W P+ +A+ P+ DHA W +   ++ +L
Sbjct: 61  LPEDQRHFVAINAELARRPDWLPLRKAKGPLSDHADWADHPDRLSLL 107