BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0109.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776331.1| amino acid ABC transporter ATPase [Herbaspir... 460 e-127 ref|YP_004753589.1| LivG [Collimonas fungivorans Ter331] >gi|340... 459 e-127 gb|EGW60813.1| ABC transporter related protein [Dechlorosoma sui... 385 e-105 ref|YP_003976732.1| ABC transporter [Achromobacter xylosoxidans ... 371 e-101 ref|ZP_06685738.1| branched-chain amino acid ABC superfamily ATP... 370 e-100 >ref|YP_003776331.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64423.1| ABC-type amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 226/252 (89%), Positives = 236/252 (93%) Query: 1 MLLQFNQISKNFGGLQVLQGVQFNVPEGGIFGLIGPNGAGKTTVFNLITGLLRASSGNIV 60 MLLQ N ISKNFGGLQVLQGV FNV +G IFGLIGPNGAGKTTVFNLITGLLRASSG+I Sbjct: 1 MLLQLNDISKNFGGLQVLQGVNFNVRQGEIFGLIGPNGAGKTTVFNLITGLLRASSGSIR 60 Query: 61 FNGQDIGNVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLDYGFGGLLLNLGSF 120 FN DIG VAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHL+YG +LLNLG F Sbjct: 61 FNDDDIGAVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLNYGVASMLLNLGGF 120 Query: 121 RKIEKEARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAG 180 R EKEARERALELLSWVRLDHKA MLADSLSYGEQRKLEFARALATKPKLLLLDEPVAG Sbjct: 121 RNAEKEARERALELLSWVRLDHKAHMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAG 180 Query: 181 MNPAEKTELMAEIINIKQRGFSIFMIEHDMRFVMGLCDRVAVLNFGKIIAEGTPDEIKNN 240 MNPAEKTELM+EI+NIKQRGF+IFMIEHDMRFVMGLC+R+AVLNFGKIIAEGTPD+IKNN Sbjct: 181 MNPAEKTELMSEIVNIKQRGFTIFMIEHDMRFVMGLCERIAVLNFGKIIAEGTPDQIKNN 240 Query: 241 QEVIEAYLGKEE 252 QEVIEAYLGKEE Sbjct: 241 QEVIEAYLGKEE 252 >ref|YP_004753589.1| LivG [Collimonas fungivorans Ter331] gb|AEK62766.1| LivG [Collimonas fungivorans Ter331] Length = 253 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/251 (88%), Positives = 235/251 (93%) Query: 2 LLQFNQISKNFGGLQVLQGVQFNVPEGGIFGLIGPNGAGKTTVFNLITGLLRASSGNIVF 61 +LQ ISKNFGGLQVLQ V FNVP+GGIFGLIGPNGAGKTTVFNLITGLLRAS G I F Sbjct: 1 MLQLKNISKNFGGLQVLQDVNFNVPQGGIFGLIGPNGAGKTTVFNLITGLLRASGGAIEF 60 Query: 62 NGQDIGNVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLDYGFGGLLLNLGSFR 121 +G DIG VAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDH+ YGFG LL NLG FR Sbjct: 61 DGADIGKVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHMHYGFGSLLFNLGGFR 120 Query: 122 KIEKEARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM 181 +IE +ARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM Sbjct: 121 RIEAQARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM 180 Query: 182 NPAEKTELMAEIINIKQRGFSIFMIEHDMRFVMGLCDRVAVLNFGKIIAEGTPDEIKNNQ 241 NPAEKTELM EI+NIKQRGFSIFMIEHDMRFVMGLCDR+AVLNFG+IIAEG+PD+IKNNQ Sbjct: 181 NPAEKTELMTEILNIKQRGFSIFMIEHDMRFVMGLCDRIAVLNFGRIIAEGSPDQIKNNQ 240 Query: 242 EVIEAYLGKEE 252 EVIEAYLGKE+ Sbjct: 241 EVIEAYLGKED 251 >gb|EGW60813.1| ABC transporter related protein [Dechlorosoma suillum PS] Length = 260 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/252 (74%), Positives = 214/252 (84%) Query: 2 LLQFNQISKNFGGLQVLQGVQFNVPEGGIFGLIGPNGAGKTTVFNLITGLLRASSGNIVF 61 LL + K+FGGL VLQ V F VP G I+GLIGPNGAGKTTVFNLITGLL S+G I F Sbjct: 9 LLSIRNVGKHFGGLHVLQDVSFEVPAGSIYGLIGPNGAGKTTVFNLITGLLTPSAGQIDF 68 Query: 62 NGQDIGNVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLDYGFGGLLLNLGSFR 121 GQ + + PH+IT +GIARTFQNIR+FKEM LLENV+VGMHDHL+YG G+ LN + R Sbjct: 69 QGQTLIGLEPHRITHQGIARTFQNIRIFKEMDLLENVMVGMHDHLNYGGFGIFLNSPACR 128 Query: 122 KIEKEARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM 181 EK+ARERALELLSWV LDHKA MLAD+LSYG+QRKLEFARALAT+PKLLLLDEPVAGM Sbjct: 129 AAEKKARERALELLSWVGLDHKADMLADNLSYGDQRKLEFARALATEPKLLLLDEPVAGM 188 Query: 182 NPAEKTELMAEIINIKQRGFSIFMIEHDMRFVMGLCDRVAVLNFGKIIAEGTPDEIKNNQ 241 NP+EKT LM EI NI+ RG+ +FMIEHDMRFVMGLCDR+AVLNFG+IIAEGTPDE++NN Sbjct: 189 NPSEKTILMEEINNIRNRGYGVFMIEHDMRFVMGLCDRIAVLNFGRIIAEGTPDEVRNNP 248 Query: 242 EVIEAYLGKEEE 253 +VIEAYLGKE+E Sbjct: 249 DVIEAYLGKEDE 260 >ref|YP_003976732.1| ABC transporter [Achromobacter xylosoxidans A8] gb|ADP14017.1| ABC transporter family protein 13 [Achromobacter xylosoxidans A8] Length = 262 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/252 (70%), Positives = 211/252 (83%) Query: 2 LLQFNQISKNFGGLQVLQGVQFNVPEGGIFGLIGPNGAGKTTVFNLITGLLRASSGNIVF 61 +L+ + +SK+FGGL VL V +VPEG IFGLIGPNGAGKTTVFNLITGLL S G I F Sbjct: 1 MLELSSVSKSFGGLHVLHDVSLSVPEGAIFGLIGPNGAGKTTVFNLITGLLPPSGGTITF 60 Query: 62 NGQDIGNVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLDYGFGGLLLNLGSFR 121 NGQ + + PH+IT GIARTFQNIR+FKEMTLLENVVVG + H++YGF LLL L +R Sbjct: 61 NGQSVLDKKPHRITRMGIARTFQNIRLFKEMTLLENVVVGAYRHMNYGFPSLLLGLPGYR 120 Query: 122 KIEKEARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM 181 + EK ARERA ELL+W+RLDHKA LAD+LSYGEQR+LE ARALAT+PKLLLLDEPVAGM Sbjct: 121 EHEKRARERAHELLTWMRLDHKANDLADNLSYGEQRRLELARALATEPKLLLLDEPVAGM 180 Query: 182 NPAEKTELMAEIINIKQRGFSIFMIEHDMRFVMGLCDRVAVLNFGKIIAEGTPDEIKNNQ 241 N E+ ELM EI+ I+ RG++I MIEHDMRFVMGLC+R+AVLNFGKIIA G PDEI+NN+ Sbjct: 181 NTGERAELMREILAIRDRGYTILMIEHDMRFVMGLCERIAVLNFGKIIACGGPDEIRNNE 240 Query: 242 EVIEAYLGKEEE 253 +VIEAYLG+E++ Sbjct: 241 QVIEAYLGREDD 252 >ref|ZP_06685738.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF77273.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/252 (70%), Positives = 209/252 (82%) Query: 2 LLQFNQISKNFGGLQVLQGVQFNVPEGGIFGLIGPNGAGKTTVFNLITGLLRASSGNIVF 61 +L+ + +SK+FGGL VL V +VPEG IFGLIGPNGAGKTTVFNLITGLL S G I F Sbjct: 1 MLELSSVSKSFGGLHVLHDVSLSVPEGSIFGLIGPNGAGKTTVFNLITGLLPPSGGTITF 60 Query: 62 NGQDIGNVAPHKITERGIARTFQNIRVFKEMTLLENVVVGMHDHLDYGFGGLLLNLGSFR 121 NGQ + PH IT GIARTFQNIR+FKEMTLLENVVVG + H++YGF LLL L +R Sbjct: 61 NGQSVLAKKPHSITRMGIARTFQNIRLFKEMTLLENVVVGAYRHMNYGFPSLLLGLPGYR 120 Query: 122 KIEKEARERALELLSWVRLDHKAGMLADSLSYGEQRKLEFARALATKPKLLLLDEPVAGM 181 + EK ARERA ELL+W+RLDHKA LAD+LSYGEQR+LE ARALAT+PKLLLLDEPVAGM Sbjct: 121 EHEKRARERAHELLTWMRLDHKANDLADNLSYGEQRRLELARALATEPKLLLLDEPVAGM 180 Query: 182 NPAEKTELMAEIINIKQRGFSIFMIEHDMRFVMGLCDRVAVLNFGKIIAEGTPDEIKNNQ 241 N E+ ELM EI+ I+ RG++I MIEHDMRFVMGLC+R+AVLNFGKIIA G PDEI+NN+ Sbjct: 181 NTGERAELMREILAIRDRGYTILMIEHDMRFVMGLCERIAVLNFGKIIACGGPDEIRNNE 240 Query: 242 EVIEAYLGKEEE 253 +VIEAYLG+E++ Sbjct: 241 QVIEAYLGREDD 252