BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0084.p         (179 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754115.1| glyoxylate carboligase [Collimonas fungivora...   318   3e-85
ref|YP_002289539.1| glyoxylate carboligase [Oligotropha carboxid...   312   1e-83
ref|ZP_07026756.1| glyoxylate carboligase [Afipia sp. 1NLS2] >gi...   310   5e-83
ref|YP_001119641.1| glyoxylate carboligase [Burkholderia vietnam...   306   7e-82
ref|YP_003744160.1| tartronate-semialdehyde synthase (glyoxylate...   306   8e-82

>ref|YP_004754115.1| glyoxylate carboligase [Collimonas fungivorans Ter331]
 gb|AEK63292.1| Glyoxylate carboligase [Collimonas fungivorans Ter331]
          Length = 591

 Score =  318 bits (814), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/164 (92%), Positives = 158/164 (96%)

Query: 1   MKAVDAAVYVLEKEGCLQAFGVPGAAINPFYSALKRHGGIQHILARHVEGASHMAEGYTR 60
           MKAVDA ++VL KEGC QAFGVPGAAINPFYSA+KRHGGIQH LARHVEGASHMAEGYTR
Sbjct: 4   MKAVDAVMHVLAKEGCSQAFGVPGAAINPFYSAMKRHGGIQHTLARHVEGASHMAEGYTR 63

Query: 61  AKAGNIGICIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 120
           A  GNIG+CIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA
Sbjct: 64  ANPGNIGVCIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 123

Query: 121 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLIDLPFDVQ 164
           KPVTKWAVTVREPAL+PRVFQQAFH+MRSGRPGPVLID+PFDVQ
Sbjct: 124 KPVTKWAVTVREPALLPRVFQQAFHIMRSGRPGPVLIDMPFDVQ 167


>ref|YP_002289539.1| glyoxylate carboligase [Oligotropha carboxidovorans OM5]
 ref|YP_004632456.1| glyoxylate carboligase Gcl [Oligotropha carboxidovorans OM5]
 gb|ACI93674.1| glyoxylate carboligase [Oligotropha carboxidovorans OM5]
 gb|AEI02639.1| glyoxylate carboligase Gcl [Oligotropha carboxidovorans OM4]
 gb|AEI06215.1| glyoxylate carboligase Gcl [Oligotropha carboxidovorans OM5]
          Length = 597

 Score =  312 bits (800), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/164 (91%), Positives = 158/164 (96%)

Query: 1   MKAVDAAVYVLEKEGCLQAFGVPGAAINPFYSALKRHGGIQHILARHVEGASHMAEGYTR 60
           M+A+DAAV VLEKEG +QAFGVPGAAINPFYSA+K+ G I+H+LARHVEGASHMAEGYTR
Sbjct: 4   MRAIDAAVAVLEKEGIVQAFGVPGAAINPFYSAMKKRGSIKHVLARHVEGASHMAEGYTR 63

Query: 61  AKAGNIGICIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 120
           AK GNIGICIGTSGPAGTDMITGLYSA ADSIPILCITGQAPRARLYKEDFQAVDIESIA
Sbjct: 64  AKPGNIGICIGTSGPAGTDMITGLYSAIADSIPILCITGQAPRARLYKEDFQAVDIESIA 123

Query: 121 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLIDLPFDVQ 164
           KPVTKWAVTVREPALVPRVFQQAFH+MRSGRPGPVLIDLPFDVQ
Sbjct: 124 KPVTKWAVTVREPALVPRVFQQAFHIMRSGRPGPVLIDLPFDVQ 167


>ref|ZP_07026756.1| glyoxylate carboligase [Afipia sp. 1NLS2]
 gb|EFI51599.1| glyoxylate carboligase [Afipia sp. 1NLS2]
          Length = 597

 Score =  310 bits (795), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 147/164 (89%), Positives = 157/164 (95%)

Query: 1   MKAVDAAVYVLEKEGCLQAFGVPGAAINPFYSALKRHGGIQHILARHVEGASHMAEGYTR 60
           M+AVDAAV VLEKEG +QAFGVPGAAINP YSA+K+ GGI+H+LARHVEGASHMAEGYTR
Sbjct: 4   MRAVDAAVAVLEKEGIVQAFGVPGAAINPLYSAMKKSGGIKHVLARHVEGASHMAEGYTR 63

Query: 61  AKAGNIGICIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 120
            K GNIG+C+GTSGPAGTDMITGLYSA ADSIPILC+TGQAPRARLYKEDFQAVDIESIA
Sbjct: 64  TKPGNIGVCLGTSGPAGTDMITGLYSASADSIPILCVTGQAPRARLYKEDFQAVDIESIA 123

Query: 121 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLIDLPFDVQ 164
           KPVTKWAVTVREPALVPRVFQQAFH+MRSGRPGPVLIDLPFDVQ
Sbjct: 124 KPVTKWAVTVREPALVPRVFQQAFHIMRSGRPGPVLIDLPFDVQ 167


>ref|YP_001119641.1| glyoxylate carboligase [Burkholderia vietnamiensis G4]
 gb|ABO54806.1| glyoxylate carboligase [Burkholderia vietnamiensis G4]
          Length = 591

 Score =  306 bits (785), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 148/164 (90%), Positives = 154/164 (93%)

Query: 1   MKAVDAAVYVLEKEGCLQAFGVPGAAINPFYSALKRHGGIQHILARHVEGASHMAEGYTR 60
           M+AVDAAV VLEKEG   AFGVPGAAINPFYSAL++ GGI H+LARHVEGASHMAEGYTR
Sbjct: 4   MRAVDAAVLVLEKEGIQTAFGVPGAAINPFYSALRKSGGISHVLARHVEGASHMAEGYTR 63

Query: 61  AKAGNIGICIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 120
           A AGNIG+CIGTSGPAGTDMITGLYSA ADSIPIL ITGQAPRARLYKEDFQAVDIESIA
Sbjct: 64  AAAGNIGVCIGTSGPAGTDMITGLYSASADSIPILAITGQAPRARLYKEDFQAVDIESIA 123

Query: 121 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLIDLPFDVQ 164
           KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVL+DLP DVQ
Sbjct: 124 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLVDLPIDVQ 167


>ref|YP_003744160.1| tartronate-semialdehyde synthase (glyoxylate carboligase)
           [Ralstonia solanacearum CFBP2957]
 emb|CBJ41512.1| Tartronate-semialdehyde synthase (glyoxylate carboligase)
           [Ralstonia solanacearum CFBP2957]
          Length = 591

 Score =  306 bits (784), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 148/164 (90%), Positives = 155/164 (94%)

Query: 1   MKAVDAAVYVLEKEGCLQAFGVPGAAINPFYSALKRHGGIQHILARHVEGASHMAEGYTR 60
           M+A+DAAV VLEKEG   AFGVPGAAINP YSAL+R G I H+LARHVEGASHMAEGYTR
Sbjct: 4   MRAIDAAVAVLEKEGITTAFGVPGAAINPLYSALRRAGSIDHVLARHVEGASHMAEGYTR 63

Query: 61  AKAGNIGICIGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLYKEDFQAVDIESIA 120
           A+AGNIG+CIGTSGPAGTDMITGLYSA ADSIPILCITGQAPRARLYKEDFQAVDIESIA
Sbjct: 64  AEAGNIGVCIGTSGPAGTDMITGLYSAWADSIPILCITGQAPRARLYKEDFQAVDIESIA 123

Query: 121 KPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLIDLPFDVQ 164
           KPVTKWAVTVREPALVPRVFQQAFH+MRSGRPGPVLIDLPFDVQ
Sbjct: 124 KPVTKWAVTVREPALVPRVFQQAFHVMRSGRPGPVLIDLPFDVQ 167