BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0080.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776651.1| xanthine dehydrogenase subunit A [Herbaspiri... 258 2e-67 ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinob... 258 3e-67 gb|ADI18829.1| xanthine dehydrogenase, iron-sulfur cluster and f... 226 7e-58 ref|ZP_08275059.1| Xanthine dehydrogenase, iron-sulfur cluster a... 222 2e-56 ref|YP_003907882.1| xanthine dehydrogenase small subunit [Burkho... 219 2e-55 >ref|YP_003776651.1| xanthine dehydrogenase subunit A [Herbaspirillum seropedicae SmR1] emb|CAM32571.2| xanthine dehydrogenase (subunit A) protein [Herbaspirillum seropedicae] gb|ADJ64743.1| xanthine dehydrogenase (subunit A) protein [Herbaspirillum seropedicae SmR1] Length = 494 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/164 (75%), Positives = 133/164 (81%) Query: 5 IRFYFRGETHQVDGLPNTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRGNELEL 64 I+FYFRG+TH V G TRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGEL+G +L L Sbjct: 8 IQFYFRGQTHSVAGHSPTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELQGEQLAL 67 Query: 65 KTVNSCIQFVPTLDGKALFTVEDLKQRDGCLHPAQQAMVECHGSQCGFCTPGFVMSLWGL 124 KTVN+CIQF+PTLDG+ALFTVEDLKQ DG LHP QQAMVECHGSQCGFCTPGFVMSLWGL Sbjct: 68 KTVNACIQFLPTLDGRALFTVEDLKQADGSLHPVQQAMVECHGSQCGFCTPGFVMSLWGL 127 Query: 125 YLKHEQDNVAPTTREIDDALSRRRPYWRKWRHCATTCRRRASWP 168 YL+HEQD V P+ REIDDALS +R RR P Sbjct: 128 YLRHEQDGVTPSKREIDDALSGNLCRCTGYRPIIDAARRMGELP 171 >ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille] gb|ABR89028.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille] Length = 496 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 128/145 (88%) Query: 1 MSEPIRFYFRGETHQVDGLPNTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRGN 60 MSEPIRFYFRG TH+V G+ NTRTVLQHLRED+HCTGTKEGCAEGDCGACTVVVGEL G+ Sbjct: 1 MSEPIRFYFRGTTHEVSGISNTRTVLQHLREDMHCTGTKEGCAEGDCGACTVVVGELHGD 60 Query: 61 ELELKTVNSCIQFVPTLDGKALFTVEDLKQRDGCLHPAQQAMVECHGSQCGFCTPGFVMS 120 LEL TVNSCIQF+PTLDGKALFTVEDLKQ DGCLHP QQAMVECHGSQCGFCTPGFVMS Sbjct: 61 HLELNTVNSCIQFLPTLDGKALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMS 120 Query: 121 LWGLYLKHEQDNVAPTTREIDDALS 145 LW LY + + A + R+IDDALS Sbjct: 121 LWNLYQRDAGSDTALSPRQIDDALS 145 >gb|ADI18829.1| xanthine dehydrogenase, iron-sulfur cluster and fad-binding subunit a [uncultured beta proteobacterium HF0010_04H24] Length = 509 Score = 226 bits (577), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 111/168 (66%), Positives = 124/168 (73%), Gaps = 2/168 (1%) Query: 1 MSEPIRFYFRGETHQVDGLPNTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRGN 60 MSEPIRFY+RG +V T+TVLQHLREDLHCTGTKEGCAEGDCGACTVV+G L Sbjct: 22 MSEPIRFYYRGAVQEVRNAAPTQTVLQHLREDLHCTGTKEGCAEGDCGACTVVIGSLVDG 81 Query: 61 ELELKTVNSCIQFVPTLDGKALFTVEDLKQRDGCLHPAQQAMVECHGSQCGFCTPGFVMS 120 +E+K VN+CIQ PTLDGKALF+VEDL+Q DG LHP QQAMVECHGSQCGFCTPGFVMS Sbjct: 82 LVEMKAVNACIQLTPTLDGKALFSVEDLQQPDGALHPVQQAMVECHGSQCGFCTPGFVMS 141 Query: 121 LWGLYLKHEQDNVAPTTREIDDALSRRRPYWRKWRHCATTCRRRASWP 168 LWG+YL E++ PT EIDDALS +R RR P Sbjct: 142 LWGMYL--EKNGATPTRCEIDDALSGNLCRCTGYRPIIDAARRMGELP 187 >ref|ZP_08275059.1| Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Oxalobacteraceae bacterium IMCC9480] gb|EGF31469.1| Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Oxalobacteraceae bacterium IMCC9480] Length = 493 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/145 (71%), Positives = 117/145 (80%) Query: 1 MSEPIRFYFRGETHQVDGLPNTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRGN 60 MSE IRF+FRG +VD RTVLQ+LREDLHCTGTKEGCAEGDCGACTV+VG L Sbjct: 1 MSESIRFHFRGAMREVDAAAPLRTVLQYLREDLHCTGTKEGCAEGDCGACTVMVGRLHDG 60 Query: 61 ELELKTVNSCIQFVPTLDGKALFTVEDLKQRDGCLHPAQQAMVECHGSQCGFCTPGFVMS 120 L L+ VN+CI+ +PTLDGKALFTVEDL+Q DG LHP QQAMV+CHGSQCGFCTPGFVMS Sbjct: 61 ALRLEPVNACIRLLPTLDGKALFTVEDLQQADGTLHPVQQAMVDCHGSQCGFCTPGFVMS 120 Query: 121 LWGLYLKHEQDNVAPTTREIDDALS 145 LW LYL+ E P+ R++DDALS Sbjct: 121 LWNLYLQREGQPAPPSRRQVDDALS 145 >ref|YP_003907882.1| xanthine dehydrogenase small subunit [Burkholderia sp. CCGE1003] gb|ADN58591.1| xanthine dehydrogenase, small subunit [Burkholderia sp. CCGE1003] Length = 541 Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/145 (71%), Positives = 116/145 (80%), Gaps = 1/145 (0%) Query: 2 SEPIRFYFRGETHQVDGLPNTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRGN- 60 ++ IRFY +G H+V G+P TRTVLQHLREDLHCTGTKEGCAEGDCGACTVV+GEL + Sbjct: 31 TQTIRFYRQGSVHEVAGVPATRTVLQHLREDLHCTGTKEGCAEGDCGACTVVIGELDAHG 90 Query: 61 ELELKTVNSCIQFVPTLDGKALFTVEDLKQRDGCLHPAQQAMVECHGSQCGFCTPGFVMS 120 L LK VN+CIQF+PTLDGKALFTVEDL+ DG LHP QQAMV+CHGSQCGFCTPGFVMS Sbjct: 91 ALALKAVNACIQFLPTLDGKALFTVEDLRAADGTLHPVQQAMVDCHGSQCGFCTPGFVMS 150 Query: 121 LWGLYLKHEQDNVAPTTREIDDALS 145 +W LY PT EI+ ALS Sbjct: 151 MWALYENQPAAAGLPTRDEINTALS 175