BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0079.p         (92 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinob...   140   6e-32
ref|YP_620233.1| molybdopterin dehydrogenase, FAD-binding [Burkh...   132   1e-29
ref|YP_834478.1| 2Fe-2S ferredoxin, iron-sulfur binding site [Bu...   132   2e-29
ref|YP_001764104.1| xanthine dehydrogenase, small subunit [Burkh...   132   2e-29
ref|YP_001118616.1| FAD-binding molybdopterin dehydrogenase [Bur...   132   2e-29

>ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille]
 gb|ABR89028.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille]
          Length = 496

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/82 (81%), Positives = 71/82 (86%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTKHMRDLGDIIYIGQVE ++ I  +  WLEIGAGVTLEKAYAA    YP ELSE+WQRF
Sbjct: 231 VTKHMRDLGDIIYIGQVEALKSIKERSGWLEIGAGVTLEKAYAAAHQHYPQELSELWQRF 290

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASLPVRNAGTLGGNVANGSPIG
Sbjct: 291 ASLPVRNAGTLGGNVANGSPIG 312


>ref|YP_620233.1| molybdopterin dehydrogenase, FAD-binding [Burkholderia cenocepacia
           AU 1054]
 gb|ABF75260.1| molybdopterin dehydrogenase, FAD-binding protein [Burkholderia
           cenocepacia AU 1054]
          Length = 528

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MR L D+IY+GQ+ E++ +V  DDW+EIGAGVT+EKAYAAL G YP EL+EMW+RF
Sbjct: 254 VTKQMRRLDDLIYVGQIAELQQVVHGDDWIEIGAGVTVEKAYAALAGTYP-ELTEMWKRF 312

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASLP+RNAGTLGGNVANGSPIG
Sbjct: 313 ASLPIRNAGTLGGNVANGSPIG 334


>ref|YP_834478.1| 2Fe-2S ferredoxin, iron-sulfur binding site [Burkholderia
           cenocepacia HI2424]
 gb|ABK07585.1| 2Fe-2S ferredoxin, iron-sulfur binding site [Burkholderia
           cenocepacia HI2424]
          Length = 528

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MR L D+IY+GQ+ E++ +V  DDW+EIGAGVT+EKAYAAL G YP EL+EMW+RF
Sbjct: 254 VTKQMRRLDDLIYVGQIAELQQVVHGDDWIEIGAGVTVEKAYAALAGTYP-ELTEMWKRF 312

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASLP+RNAGTLGGNVANGSPIG
Sbjct: 313 ASLPIRNAGTLGGNVANGSPIG 334


>ref|YP_001764104.1| xanthine dehydrogenase, small subunit [Burkholderia cenocepacia
           MC0-3]
 gb|ACA89982.1| xanthine dehydrogenase, small subunit [Burkholderia cenocepacia
           MC0-3]
          Length = 523

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MR L D+IY+GQ+ E++ IV  DDW+E+GAGVT+EKAYAAL G YP EL+EMW+RF
Sbjct: 249 VTKQMRRLDDLIYVGQIAELQQIVHGDDWIEVGAGVTVEKAYAALAGTYP-ELTEMWKRF 307

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASLP+RNAGTLGGNVANGSPIG
Sbjct: 308 ASLPIRNAGTLGGNVANGSPIG 329


>ref|YP_001118616.1| FAD-binding molybdopterin dehydrogenase [Burkholderia vietnamiensis
           G4]
 gb|ABO53781.1| molybdopterin dehydrogenase, FAD-binding protein [Burkholderia
           vietnamiensis G4]
          Length = 532

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MR L D+IY+GQV E++ IV  DDW+EIGAGVT+E+AYAAL G YP EL+EMW+RF
Sbjct: 258 VTKQMRRLDDLIYVGQVAELQRIVHGDDWIEIGAGVTVERAYAALAGTYP-ELTEMWKRF 316

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASLP+RNAGTLGGNVANGSPIG
Sbjct: 317 ASLPIRNAGTLGGNVANGSPIG 338