BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0077.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352196.1| xanthine dehydrogenase, subunit B [Janthinob...   203   8e-51
ref|YP_003776652.1| xanthine dehydrogenase subunit B [Herbaspiri...   194   3e-48
ref|YP_004754790.1| xanthine dehydrogenase, molybdenum binding s...   194   4e-48
ref|YP_725526.1| xanthine dehydrogenase, subunit B [Ralstonia eu...   167   5e-40
ref|YP_004684797.1| xanthine dehydrogenase/oxidase XdhB [Cupriav...   166   1e-39

>ref|YP_001352196.1| xanthine dehydrogenase, subunit B [Janthinobacterium sp. Marseille]
 gb|ABR89099.1| xanthine dehydrogenase, subunit B [Janthinobacterium sp. Marseille]
          Length = 785

 Score =  203 bits (516), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 103/132 (78%), Positives = 111/132 (84%), Gaps = 1/132 (0%)

Query: 1   MNKQTEEFMSVKSAQASWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLSGK 60
           MNKQTE FMS  + Q     VG P+PHESA LHVTGEA YTDDIVEL GTLHAALGLS K
Sbjct: 1   MNKQTEVFMSDTALQGV-KAVGTPYPHESAYLHVTGEAIYTDDIVELHGTLHAALGLSQK 59

Query: 61  AHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQPIFVVI 120
           AHA++ SIDL KVKA+ GV+AV TAADIPGEN+CGAII DDPVLAEDLVQY+GQPIFVVI
Sbjct: 60  AHARINSIDLGKVKAAPGVIAVLTAADIPGENECGAIIHDDPVLAEDLVQYIGQPIFVVI 119

Query: 121 ADSHDNARRAAR 132
           A SHD ARRAAR
Sbjct: 120 ATSHDAARRAAR 131


>ref|YP_003776652.1| xanthine dehydrogenase subunit B [Herbaspirillum seropedicae SmR1]
 gb|ADJ64744.1| xanthine dehydrogenase (subunit B) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 789

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 112/133 (84%), Gaps = 1/133 (0%)

Query: 1   MNKQTEEFMS-VKSAQASWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLSG 59
           MN+ TE F++ +      W  VGKPHPHESA LHVTGEA YTDDI EL+GTLHAALGLS 
Sbjct: 1   MNQHTEAFLAPLAQPPHDWAAVGKPHPHESARLHVTGEAVYTDDIPELRGTLHAALGLSQ 60

Query: 60  KAHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQPIFVV 119
           KAHA++R+IDL KVKA+ GV AV+TAADIPG+N+CGAI+ DDPVLA+ LVQYVGQP+F+V
Sbjct: 61  KAHARVRAIDLEKVKAAPGVKAVFTAADIPGDNECGAILHDDPVLADGLVQYVGQPLFIV 120

Query: 120 IADSHDNARRAAR 132
           +ADSH+ ARRAAR
Sbjct: 121 VADSHELARRAAR 133


>ref|YP_004754790.1| xanthine dehydrogenase, molybdenum binding subunit [Collimonas
           fungivorans Ter331]
 gb|AEK63967.1| Xanthine dehydrogenase, molybdenum binding subunit [Collimonas
           fungivorans Ter331]
          Length = 791

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/139 (67%), Positives = 110/139 (79%), Gaps = 6/139 (4%)

Query: 1   MNKQTEEFM------SVKSAQASWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAA 54
           MNKQTE FM      S     ++W EVG+ HPHESAILHV GEATYTDDI E QGTLHAA
Sbjct: 1   MNKQTEVFMKPAPQDSNTDNSSAWAEVGQSHPHESAILHVLGEATYTDDIPEAQGTLHAA 60

Query: 55  LGLSGKAHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQ 114
           LG+S KAHA++RSI+   V+++ GVVAV+TAADIPG N CG II DDP+LA+ LV+YVGQ
Sbjct: 61  LGMSQKAHARIRSINFDAVRSARGVVAVFTAADIPGTNDCGPIIHDDPILADGLVEYVGQ 120

Query: 115 PIFVVIADSHDNARRAARR 133
           PIF VIAD+HDNARRA R+
Sbjct: 121 PIFAVIADTHDNARRAVRK 139


>ref|YP_725526.1| xanthine dehydrogenase, subunit B [Ralstonia eutropha H16]
 emb|CAJ92158.1| xanthine dehydrogenase, subunit B [Ralstonia eutropha H16]
          Length = 822

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/132 (62%), Positives = 102/132 (77%), Gaps = 1/132 (0%)

Query: 1   MNKQTEEFMSVKSAQASWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLSGK 60
           MNKQTE F+   +A+   ++VG   PHESA LHV G ATYTDDI EL GTLHAALG+S +
Sbjct: 1   MNKQTEPFLLDATAEQV-SQVGISRPHESAHLHVAGTATYTDDIPELAGTLHAALGMSTR 59

Query: 61  AHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQPIFVVI 120
           AHA+++SI L KV+A+ GVV V T  DIPG N CG II DDP+LA D+VQ++GQP+F+V+
Sbjct: 60  AHARIKSISLDKVRAAPGVVDVLTVDDIPGTNDCGPIIHDDPILARDVVQFIGQPVFIVV 119

Query: 121 ADSHDNARRAAR 132
           A SHD ARRAAR
Sbjct: 120 ATSHDAARRAAR 131


>ref|YP_004684797.1| xanthine dehydrogenase/oxidase XdhB [Cupriavidus necator N-1]
 gb|AEI76316.1| xanthine dehydrogenase/oxidase XdhB [Cupriavidus necator N-1]
          Length = 782

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/132 (62%), Positives = 101/132 (76%), Gaps = 1/132 (0%)

Query: 1   MNKQTEEFMSVKSAQASWTEVGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLSGK 60
           MNKQTE F+   +A+    +VG   PHESA LHV G ATYTDDI EL GTLHAALG+S +
Sbjct: 1   MNKQTEPFLLDATAEQV-PQVGISRPHESAHLHVAGTATYTDDIPELAGTLHAALGMSTR 59

Query: 61  AHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQPIFVVI 120
           AHA+++S+ L KV+A+ GVV V T  DIPG N CG II DDP+LA D+VQ++GQPIF+V+
Sbjct: 60  AHARIKSVSLDKVRAAPGVVDVLTVDDIPGTNDCGPIIHDDPILARDVVQFIGQPIFIVV 119

Query: 121 ADSHDNARRAAR 132
           A SHD ARRAAR
Sbjct: 120 ATSHDAARRAAR 131