BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0072.p (314 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752338.1| hypothetical protein CFU_1683 [Collimonas fu... 349 3e-94 ref|YP_003776660.1| transmembrane protein [Herbaspirillum serope... 323 2e-86 ref|ZP_08273795.1| putative transmembrane protein [Oxalobacterac... 292 5e-77 ref|YP_001100428.1| putative signal peptide [Herminiimonas arsen... 286 2e-75 ref|YP_001352978.1| hypothetical protein mma_1288 [Janthinobacte... 276 4e-72 >ref|YP_004752338.1| hypothetical protein CFU_1683 [Collimonas fungivorans Ter331] gb|AEK61515.1| Conserved hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 321 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 168/282 (59%), Positives = 211/282 (74%), Gaps = 2/282 (0%) Query: 26 FNFGVVGHSFSGSPDEGVLRRALDESDADNLAFVVVNGIKSAAEPCSDALYSARRDLLKE 85 F+FGV+ H F + DE LR A+ E+DADNLAFVV NGIK+++EPC+D LY R+ LL Sbjct: 35 FSFGVIAHVFRSNADETALRGAISETDADNLAFVVANGIKASSEPCTDKLYGQRKALLSS 94 Query: 86 AENGIIVSLAASDWVGCRNK-NGSVAIERLNRMRDLFFPDEFSFGASKVPLFRQSVTPKF 144 A+NG+IVSL+ASDWV CR + S AIERL+R+R+LFF DEFSFG SK+PL RQS +PKF Sbjct: 95 AKNGLIVSLSASDWVTCRTTADRSAAIERLSRIRELFFSDEFSFGDSKIPLIRQSTSPKF 154 Query: 145 RSYTENARWEFGNVLFATINLPAANNHFLQDGGRNSEFEDRLIANKDWLQRLFIFATQKK 204 RSY ENARWE GNV+FATINLPAANNH+L +GGRNSEFEDR IAN++WLQR+F+ A+QKK Sbjct: 155 RSYVENARWEIGNVVFATINLPAANNHYLAEGGRNSEFEDRQIANREWLQRVFLNASQKK 214 Query: 205 LAGIVLFADGNPLAQPSQRPFLLRGQRDGFAETRQRITTLAATFKGKILLVHGENLKDES 264 +VLF DG+PLA R F +RDGF E RQRI + AA F+GK+L++HG + + Sbjct: 215 SDAVVLFCDGDPLATQRHRVFDFNVKRDGFTEIRQRINSHAAHFEGKVLVIHGPHGTAST 274 Query: 265 N-AGIVWRRNLGSIGVASGWSKFAVDSGNAALFTLNNSSKAP 305 N A I+W+RNLG + V +GW K VD +A LF L + P Sbjct: 275 NPANIIWQRNLGDLEVPAGWLKVTVDPASAKLFELGKPADQP 316 >ref|YP_003776660.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64752.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 157/274 (57%), Positives = 202/274 (73%), Gaps = 3/274 (1%) Query: 26 FNFGVVGHSFSGSPDEGVLRRALDESDADNLAFVVVNGIKSAAEPCSDALYSARRDLLKE 85 F+FGV+ H+ +G E LR+AL E+DADNLAFVVVNGIKS +E C D LY+AR +LL + Sbjct: 29 FSFGVINHAAAGK-GEDTLRQALAETDADNLAFVVVNGIKSPSESCDDTLYNARHELLSQ 87 Query: 86 AENGIIVSLAASDWVGCRNK-NGSVAIERLNRMRDLFFPDEFSFGASKVPLFRQSVTPKF 144 A+NG+ +SLA SDW+ CR++ N S AIERL RMR++F+ EFS GA+++P+ RQS+TPKF Sbjct: 88 AQNGVFLSLAGSDWITCRDRENRSDAIERLARMREIFYSGEFSLGATRLPMLRQSLTPKF 147 Query: 145 RSYTENARWEFGNVLFATINLPAANNHFLQDGGRNSEFEDRLIANKDWLQRLFIFATQKK 204 RSY EN RWE GNV+FAT+NLPA NNHFL DGGRN+EFEDRLIAN++WLQ LF FA KK Sbjct: 148 RSYAENTRWEVGNVIFATVNLPAGNNHFLLDGGRNNEFEDRLIANRNWLQHLFAFAALKK 207 Query: 205 LAGIVLFADGNPLAQPSQRPFLLRGQRDGFAETRQRITTLAATFKGKILLVHGENLKDES 264 A IV F+DGNP P +R F R QRDGFAETR+ + L+ F G++L+VHG+ K ++ Sbjct: 208 SAAIVFFSDGNPFGPPPKRSF-FRAQRDGFAETRRLFSDLSGNFAGRVLVVHGQAPKPKT 266 Query: 265 NAGIVWRRNLGSIGVASGWSKFAVDSGNAALFTL 298 + I+W LG++ V W K VD LF + Sbjct: 267 PSHILWTGKLGNVAVGERWLKIVVDDHLPQLFAV 300 >ref|ZP_08273795.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32744.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 302 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 161/303 (53%), Positives = 200/303 (66%), Gaps = 15/303 (4%) Query: 1 MKKLLSLILLGAALCATPASWAQDSFNFGVVGHSFSGSPDEGVLRRALDESDADNLAFVV 60 M+ L+ +LLG AL A P A DSF V+ + + L RA+ ++D DNLAFVV Sbjct: 1 MRCQLTGLLLGFALIA-PVQAAGDSFRIAVLA-----TIGDNALERAIADTDDDNLAFVV 54 Query: 61 VNGIKSAAEPCSDALYSARRDLLKEAENGIIVSLAASDWVGCRNKNG-SVAIERLNRMRD 119 VNGIK+A CSDA+Y R+ LL A+NG+I+SLA SDW CRN G S+A+ERL R+RD Sbjct: 55 VNGIKAADAACSDAVYLERKILLDSAKNGVILSLAGSDWTACRNTAGQSIAMERLTRLRD 114 Query: 120 LFFPDEFSFGASKVPLFRQSVTPKFRSYTENARWEFGNVLFATINLPAANNHFLQDGGRN 179 LFF EFSFGAS++PL RQS TPKFRSY ENA WE G + FATINLPA NNHFL GRN Sbjct: 115 LFFTGEFSFGASRIPLLRQSGTPKFRSYAENAHWEVGAIQFATINLPADNNHFLAAAGRN 174 Query: 180 SEFEDRLIANKDWLQRLFIFATQKKLAGIVLFADGNPLAQPSQRPFLLRGQRDGFAETRQ 239 SEFEDR IAN WLQRL AT +KLA +VLF DGN L P + P RDGFA+ R Sbjct: 175 SEFEDRQIANHAWLQRLIANATHRKLAALVLFCDGN-LMLPKKNP----PPRDGFAQLRG 229 Query: 240 RITTLAATFKGKILLVHGENLKDESNAGIVWRRNLGSIGVASGWSKFAVDSGNAALFTLN 299 ++T LAA + GK+LLVH + I WR N+G++ V SG + + ALF ++ Sbjct: 230 QLTQLAAGYPGKVLLVHE---GAGATGDIRWRDNIGTLAVGSGGIRLTITPEGPALFVVS 286 Query: 300 NSS 302 +S+ Sbjct: 287 DSA 289 >ref|YP_001100428.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL62305.1| Conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 316 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 151/312 (48%), Positives = 197/312 (63%), Gaps = 9/312 (2%) Query: 2 KKLLSLILLGAALC-ATPASWAQDSFNFGVVGHSFSGSPDEGVLRRALDESDADNLAFVV 60 + + L+LL A TPAS F+FGV+ + E +R A+ ESDADNLAFVV Sbjct: 7 RCVTCLVLLQAPWAHGTPAS----PFSFGVIAKQLKAANGEATVRNAIAESDADNLAFVV 62 Query: 61 VNGIKSAAEPCSDALYSARRDLLKEAENGIIVSLAASDWVGCRN-KNGSVAIERLNRMRD 119 NGIK+ EPC+D +Y RR LL A+NG++VS+ ASDW C N KN S+A +R++R+RD Sbjct: 63 ANGIKAVDEPCTDTVYKNRRALLNSAKNGLVVSITASDWAQCVNAKNRSIATDRISRLRD 122 Query: 120 LFFPDEFSFGASKVPLFRQSVTPKFRSYTENARWEFGNVLFATINLPAANNHFLQDGGRN 179 LFF DEFS G SK+PL RQS P+FR Y EN RW +V+FATINLP+ NN++L GRN Sbjct: 123 LFFADEFSLGDSKIPLIRQSSMPQFRMYAENMRWRINDVMFATINLPSNNNNYLNAAGRN 182 Query: 180 SEFEDRLIANKDWLQRLFIFATQKKLAGIVLFADGNPLAQPSQRPFLLR-GQRDGFAETR 238 SEFEDR IAN DWL+RLF+ A KL GIVLF DGNP F +R+G+A R Sbjct: 183 SEFEDRQIANTDWLKRLFLTAKIGKLDGIVLFCDGNPFVPAEHTSFFSSDNKREGYANIR 242 Query: 239 QRITTLAATFKGKILLVHGENLKDESNA--GIVWRRNLGSIGVASGWSKFAVDSGNAALF 296 ++I AA F G+IL+VH + + +A I W N+G+ + W K +VDS LF Sbjct: 243 RQIMAFAAKFPGRILIVHSDQNAHQVSAPRNIDWHGNIGTFRADTPWRKISVDSALPQLF 302 Query: 297 TLNNSSKAPKTT 308 T N + + +T Sbjct: 303 TAINPALSVQTV 314 >ref|YP_001352978.1| hypothetical protein mma_1288 [Janthinobacterium sp. Marseille] gb|ABR91052.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 314 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 139/287 (48%), Positives = 188/287 (65%), Gaps = 7/287 (2%) Query: 21 WAQ----DSFNFGVVGHSFSGSPDEGVLRRALDESDADNLAFVVVNGIKSAAEPCSDALY 76 WAQ F+FGV+ + E LR A+ ESDADNLAFVV G+K+A EPC+DALY Sbjct: 19 WAQANDATPFSFGVIAKPVKANESEAALREAISESDADNLAFVVAGGLKAAEEPCTDALY 78 Query: 77 SARRDLLKEAENGIIVSLAASDWVGCRN-KNGSVAIERLNRMRDLFFPDEFSFGASKVPL 135 R+ LL A+NGI+++++ DW C N KN +A +R+NR+R+L F DEFSFG SK+P+ Sbjct: 79 RNRKTLLDSAKNGIVLAVSGDDWTRCVNTKNRLIATDRMNRLRELLFTDEFSFGDSKIPV 138 Query: 136 FRQSVTPKFRSYTENARWEFGNVLFATINLPAANNHFLQDGGRNSEFEDRLIANKDWLQR 195 RQS+ P+FRSY EN RW G+V+FATIN+PA NN++L G N+EFEDR AN DWL+R Sbjct: 139 VRQSMMPQFRSYPENMRWRIGDVMFATINVPANNNNYLNAAGHNTEFEDRQTANSDWLKR 198 Query: 196 LFIFATQKKLAGIVLFADGNPLAQPSQRPFLLRGQRDGFAETRQRITTLAATFKGKILLV 255 LF+ A K+ G+V+F DGNPL Q G+R+GFA+ R++I ++GKIL+V Sbjct: 199 LFLTAKISKVDGVVIFCDGNPLLQAEHSSMFSSGKREGFADLRRQILAFGEKYRGKILIV 258 Query: 256 HGE--NLKDESNAGIVWRRNLGSIGVASGWSKFAVDSGNAALFTLNN 300 H + S GI WR N+G++ + W K V+ + LFTL N Sbjct: 259 HSDYNTRPATSPKGISWRGNIGALRIEPPWRKIHVNPASTDLFTLIN 305