BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0063.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776668.1| translation factor SUA5 [Herbaspirillum sero... 375 e-102 ref|YP_004752329.1| hypothetical protein CFU_1674 [Collimonas fu... 350 9e-95 ref|YP_001100438.1| hypothetical protein HEAR2179 [Herminiimonas... 338 3e-91 ref|YP_001352969.1| translation factor (SUA5) [Janthinobacterium... 336 2e-90 ref|ZP_08273785.1| hypothetical protein IMCC9480_2045 [Oxalobact... 329 2e-88 >ref|YP_003776668.1| translation factor SUA5 [Herbaspirillum seropedicae SmR1] gb|ADJ64760.1| translation factor (SUA5) protein [Herbaspirillum seropedicae SmR1] Length = 211 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 183/208 (87%), Positives = 195/208 (93%) Query: 1 MSQFFQIHPDNPQLRLVKQAAQIIHGGGIVALPTDSCYALVCQLDNKDAVERLRRIRGVD 60 MSQFF+IHPDNPQLRL+KQAAQIIH GG+VALPTDSCYALVCQLDNKDAVER+RRIRGVD Sbjct: 1 MSQFFEIHPDNPQLRLIKQAAQIIHKGGLVALPTDSCYALVCQLDNKDAVERVRRIRGVD 60 Query: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGPYTFILEATKEVPRRLSHPSRKTIG 120 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPG YTFILEATKEVPRRLSHPSRKTIG Sbjct: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGAYTFILEATKEVPRRLSHPSRKTIG 120 Query: 121 LRVPENQIAHALLAELGEPLIGTTLILPDQEDALTDAEEIRERLEKQIELVIDSGACSLE 180 LRVPEN+IAH LL ELG+PL+GTTLILPD + LT AE+IR LEKQI+LVIDSGACSLE Sbjct: 121 LRVPENRIAHMLLEELGQPLLGTTLILPDDDLPLTSAEDIRSHLEKQIDLVIDSGACSLE 180 Query: 181 PTTVIDLSDDNEPVLVRQGRGDAAPFGL 208 PTTVIDL+DD +PVLVRQGRGDA FGL Sbjct: 181 PTTVIDLTDDEQPVLVRQGRGDAGIFGL 208 >ref|YP_004752329.1| hypothetical protein CFU_1674 [Collimonas fungivorans Ter331] gb|AEK61506.1| hypothetical protein CFU_1674 [Collimonas fungivorans Ter331] Length = 207 Score = 350 bits (897), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 170/208 (81%), Positives = 189/208 (90%), Gaps = 1/208 (0%) Query: 1 MSQFFQIHPDNPQLRLVKQAAQIIHGGGIVALPTDSCYALVCQLDNKDAVERLRRIRGVD 60 MSQFFQIHPDNPQLRL+KQA QII GGIVALPTD CYALVCQLDNKDAVER+RRIRGVD Sbjct: 1 MSQFFQIHPDNPQLRLIKQAVQIIQSGGIVALPTDCCYALVCQLDNKDAVERVRRIRGVD 60 Query: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGPYTFILEATKEVPRRLSHPSRKTIG 120 +KHHLT+LCRDLSEI+ YAKVDNRQ+RLLK+ATPG YTFILEATKEVPRRLSHP+RKTIG Sbjct: 61 DKHHLTMLCRDLSEISLYAKVDNRQFRLLKSATPGAYTFILEATKEVPRRLSHPARKTIG 120 Query: 121 LRVPENQIAHALLAELGEPLIGTTLILPDQEDALTDAEEIRERLEKQIELVIDSGACSLE 180 LRVP++ I +A+L ELG+PLIGTTLILP +E ALTD +E+R +LEKQIELVID GACSLE Sbjct: 121 LRVPQHSIVNAVLEELGQPLIGTTLILPGEEQALTDPDEVRSQLEKQIELVIDGGACSLE 180 Query: 181 PTTVIDLSDDNEPVLVRQGRGDAAPFGL 208 PTTVIDL+ D EP L+RQGRGDA FGL Sbjct: 181 PTTVIDLTSD-EPELIRQGRGDAGLFGL 207 >ref|YP_001100438.1| hypothetical protein HEAR2179 [Herminiimonas arsenicoxydans] emb|CAL62315.1| Conserved hypothetical protein, putative translation factor [Herminiimonas arsenicoxydans] Length = 207 Score = 338 bits (867), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 164/208 (78%), Positives = 186/208 (89%), Gaps = 1/208 (0%) Query: 1 MSQFFQIHPDNPQLRLVKQAAQIIHGGGIVALPTDSCYALVCQLDNKDAVERLRRIRGVD 60 MSQFFQIHP+NPQ RL+ QA ++I GGGIVALPTDSCYALVCQLD+KDAV RLRRIR VD Sbjct: 1 MSQFFQIHPENPQARLISQAVEVIKGGGIVALPTDSCYALVCQLDDKDAVARLRRIRNVD 60 Query: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGPYTFILEATKEVPRRLSHPSRKTIG 120 +KHHLTLLCRDLSEIAQYAK+DN+QYRLLKAATPG YTFILEATKEVPRRLSHPSRKTIG Sbjct: 61 DKHHLTLLCRDLSEIAQYAKIDNQQYRLLKAATPGAYTFILEATKEVPRRLSHPSRKTIG 120 Query: 121 LRVPENQIAHALLAELGEPLIGTTLILPDQEDALTDAEEIRERLEKQIELVIDSGACSLE 180 LRVPEN+I HA+L EL +PL+GTTLILP +++ LTD +++R+RL K ++LVID GACS Sbjct: 121 LRVPENRIVHAVLEELAQPLLGTTLILPGEDEPLTDPDDVRDRLSKVVDLVIDGGACSFI 180 Query: 181 PTTVIDLSDDNEPVLVRQGRGDAAPFGL 208 PTTVIDL+ EPVL RQGRGDAAPFGL Sbjct: 181 PTTVIDLT-GPEPVLQRQGRGDAAPFGL 207 >ref|YP_001352969.1| translation factor (SUA5) [Janthinobacterium sp. Marseille] gb|ABR89821.1| translation factor (SUA5) [Janthinobacterium sp. Marseille] Length = 207 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 164/208 (78%), Positives = 182/208 (87%), Gaps = 1/208 (0%) Query: 1 MSQFFQIHPDNPQLRLVKQAAQIIHGGGIVALPTDSCYALVCQLDNKDAVERLRRIRGVD 60 MSQFFQIHPDNPQ RL+ QA QI+ GGIVALPTDSCYALVC LD+KDAV RLRRIR VD Sbjct: 1 MSQFFQIHPDNPQARLISQAVQIVRDGGIVALPTDSCYALVCHLDDKDAVARLRRIRNVD 60 Query: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGPYTFILEATKEVPRRLSHPSRKTIG 120 +KHHLTLLCRDLSEIA YAKVDN+QYR+LKAATPG YTFILEATKEVPRRLSHPSRKTIG Sbjct: 61 DKHHLTLLCRDLSEIALYAKVDNQQYRMLKAATPGAYTFILEATKEVPRRLSHPSRKTIG 120 Query: 121 LRVPENQIAHALLAELGEPLIGTTLILPDQEDALTDAEEIRERLEKQIELVIDSGACSLE 180 LRVPEN+I HALL EL +PL+GTTLILP +++ LTD E++R+RL K ++LVID GACS E Sbjct: 121 LRVPENRIVHALLEELAQPLLGTTLILPGEDEPLTDPEDVRDRLNKVVDLVIDGGACSFE 180 Query: 181 PTTVIDLSDDNEPVLVRQGRGDAAPFGL 208 PTTVIDL+ EPVL RQGRGDA FGL Sbjct: 181 PTTVIDLT-SGEPVLQRQGRGDATLFGL 207 >ref|ZP_08273785.1| hypothetical protein IMCC9480_2045 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32734.1| hypothetical protein IMCC9480_2045 [Oxalobacteraceae bacterium IMCC9480] Length = 207 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/208 (77%), Positives = 182/208 (87%), Gaps = 1/208 (0%) Query: 1 MSQFFQIHPDNPQLRLVKQAAQIIHGGGIVALPTDSCYALVCQLDNKDAVERLRRIRGVD 60 MSQFFQIH DNPQ RL+ QAA+IIH GGIVA+PTDS YALVC LD+KDAV RLRR+RGVD Sbjct: 1 MSQFFQIHADNPQQRLINQAAEIIHRGGIVAMPTDSSYALVCHLDDKDAVTRLRRLRGVD 60 Query: 61 EKHHLTLLCRDLSEIAQYAKVDNRQYRLLKAATPGPYTFILEATKEVPRRLSHPSRKTIG 120 +KH LTLLCRDL+EIA YAKVDN+QYRLLKAATPG YT ILEATKEVPRR+SHPSRKTIG Sbjct: 61 DKHLLTLLCRDLAEIALYAKVDNKQYRLLKAATPGSYTMILEATKEVPRRISHPSRKTIG 120 Query: 121 LRVPENQIAHALLAELGEPLIGTTLILPDQEDALTDAEEIRERLEKQIELVIDSGACSLE 180 LRVPEN+IA ALL +LG+PL+GTTLILP E LTDAE +RER+EKQ++L+ID GACSLE Sbjct: 121 LRVPENKIALALLEQLGQPLLGTTLILPGDEHPLTDAESVRERIEKQVDLIIDGGACSLE 180 Query: 181 PTTVIDLSDDNEPVLVRQGRGDAAPFGL 208 PTTV+DLS D EPVL+R GRG A FG Sbjct: 181 PTTVVDLSGD-EPVLIRAGRGPLALFGF 207