BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0031.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776695.1| TRP repressor binding protein [Herbaspirillu... 315 1e-84 ref|YP_001353870.1| trp repressor binding protein [Janthinobacte... 303 4e-81 ref|ZP_08272947.1| tryptophan repressor binding protein [Oxaloba... 285 2e-75 ref|YP_004753565.1| tryptophan repressor binding protein [Collim... 282 1e-74 ref|YP_001099509.1| tryptophan repressor binding protein [Hermin... 265 2e-69 >ref|YP_003776695.1| TRP repressor binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ64787.1| TRP repressor binding protein [Herbaspirillum seropedicae SmR1] Length = 214 Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 148/172 (86%), Positives = 161/172 (93%) Query: 1 VESVPGCDARLRTVPAVSTVTEATEPDVPANGAPYVELSDLEQCAGLALGSPTRFGNMAA 60 VESVPGCDARLRTVPAVSTV EA EPDVPA+GAPYVE SDLE+C GLALGSPTRFGNMAA Sbjct: 41 VESVPGCDARLRTVPAVSTVAEAVEPDVPASGAPYVEASDLEECDGLALGSPTRFGNMAA 100 Query: 61 AMKYFWDGTAPQWLSGALAGKPASVFTSTGSLHGGQESTLLSMMIPLLHHGMLIVGLPYT 120 AMKYFWDGTAPQWLSGAL GKPA VFTSTGSLHGGQE+TLLSMMIPLLHHGML+VGLPY+ Sbjct: 101 AMKYFWDGTAPQWLSGALTGKPACVFTSTGSLHGGQEATLLSMMIPLLHHGMLLVGLPYS 160 Query: 121 QPELMSTSSGGSPYGASHWAGVNGNQAISDDTRALAVALGRRLAQNAIKLQE 172 PELM+T SGG+PYGASHWAGVNGNQ +SDD+R LA+ALG+RLA+NAIKL+ Sbjct: 161 HPELMNTHSGGTPYGASHWAGVNGNQPLSDDSRTLAIALGKRLAENAIKLRR 212 >ref|YP_001353870.1| trp repressor binding protein [Janthinobacterium sp. Marseille] gb|ABR89342.1| trp repressor binding protein [Janthinobacterium sp. Marseille] Length = 202 Score = 303 bits (777), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 142/171 (83%), Positives = 160/171 (93%) Query: 1 VESVPGCDARLRTVPAVSTVTEATEPDVPANGAPYVELSDLEQCAGLALGSPTRFGNMAA 60 ++SVPGC+ARLRTVPAVSTV EATEP+VP GAPYVEL DLE+CAGLALGSPTRFGNMA+ Sbjct: 30 IDSVPGCEARLRTVPAVSTVIEATEPEVPNEGAPYVELQDLEECAGLALGSPTRFGNMAS 89 Query: 61 AMKYFWDGTAPQWLSGALAGKPASVFTSTGSLHGGQESTLLSMMIPLLHHGMLIVGLPYT 120 AMKYFWDGT+ QWLSGAL GKPA VFTSTGSLHGGQESTLLSMM+PLLHHGML++GLPYT Sbjct: 90 AMKYFWDGTSAQWLSGALNGKPACVFTSTGSLHGGQESTLLSMMLPLLHHGMLVLGLPYT 149 Query: 121 QPELMSTSSGGSPYGASHWAGVNGNQAISDDTRALAVALGRRLAQNAIKLQ 171 QPELM+TSSGG+PYGASHW+GV+GNQ IS DTRALA+ALG+RLAQ +KL+ Sbjct: 150 QPELMTTSSGGTPYGASHWSGVSGNQPISADTRALAIALGQRLAQTTVKLR 200 >ref|ZP_08272947.1| tryptophan repressor binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33569.1| tryptophan repressor binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 181 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 131/171 (76%), Positives = 151/171 (88%) Query: 1 VESVPGCDARLRTVPAVSTVTEATEPDVPANGAPYVELSDLEQCAGLALGSPTRFGNMAA 60 +ESV GCDA LRTVPA+STVTEATEP++P GAPYVEL DL CAGLA GSPTRFGNMA+ Sbjct: 9 IESVAGCDALLRTVPAISTVTEATEPEIPTQGAPYVELQDLTDCAGLAFGSPTRFGNMAS 68 Query: 61 AMKYFWDGTAPQWLSGALAGKPASVFTSTGSLHGGQESTLLSMMIPLLHHGMLIVGLPYT 120 +KYFWDGT+ QWL GALAGKPA VFTSTGSLHGGQESTLL+MM+PLLHHGM+I+GLPYT Sbjct: 69 PLKYFWDGTSAQWLGGALAGKPACVFTSTGSLHGGQESTLLTMMMPLLHHGMMILGLPYT 128 Query: 121 QPELMSTSSGGSPYGASHWAGVNGNQAISDDTRALAVALGRRLAQNAIKLQ 171 PELM+TSSGG+PYGASHW+G+NG ISDD+R L +ALGRRLA+ A K++ Sbjct: 129 HPELMTTSSGGTPYGASHWSGLNGKHPISDDSRTLTIALGRRLAETAQKMR 179 >ref|YP_004753565.1| tryptophan repressor binding protein [Collimonas fungivorans Ter331] gb|AEK62742.1| tryptophan repressor binding protein [Collimonas fungivorans Ter331] Length = 204 Score = 282 bits (721), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 130/172 (75%), Positives = 153/172 (88%) Query: 1 VESVPGCDARLRTVPAVSTVTEATEPDVPANGAPYVELSDLEQCAGLALGSPTRFGNMAA 60 ++SV GC+ARLRTVPAVSTV EA+ PD+PA GAPYVEL+DL++C GLALGSPTRFGNMAA Sbjct: 33 IDSVAGCEARLRTVPAVSTVIEASAPDIPAEGAPYVELADLQECCGLALGSPTRFGNMAA 92 Query: 61 AMKYFWDGTAPQWLSGALAGKPASVFTSTGSLHGGQESTLLSMMIPLLHHGMLIVGLPYT 120 AMKYFWDGT+ WL+G LAGKPA VFTSTGSLHGGQESTL+SMM PLLHHGML++GLPYT Sbjct: 93 AMKYFWDGTSTDWLAGTLAGKPACVFTSTGSLHGGQESTLMSMMTPLLHHGMLVMGLPYT 152 Query: 121 QPELMSTSSGGSPYGASHWAGVNGNQAISDDTRALAVALGRRLAQNAIKLQE 172 PELM+T+SGGSPYGASHW+G+NG IS ++R LA+A GRRLA+ A+KL + Sbjct: 153 LPELMTTASGGSPYGASHWSGMNGTHPISAESRTLAIAQGRRLAETALKLTQ 204 >ref|YP_001099509.1| tryptophan repressor binding protein [Herminiimonas arsenicoxydans] emb|CAL61382.1| Flavodoxin/nitric oxide synthase [Herminiimonas arsenicoxydans] Length = 192 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 137/171 (80%), Positives = 155/171 (90%) Query: 1 VESVPGCDARLRTVPAVSTVTEATEPDVPANGAPYVELSDLEQCAGLALGSPTRFGNMAA 60 ++ V GC+ARLRTVPAVSTVTEAT PD+P GAPYVEL DLE+CA LALGSPTRFGNMAA Sbjct: 20 IDGVAGCEARLRTVPAVSTVTEATAPDIPTEGAPYVELRDLEECAALALGSPTRFGNMAA 79 Query: 61 AMKYFWDGTAPQWLSGALAGKPASVFTSTGSLHGGQESTLLSMMIPLLHHGMLIVGLPYT 120 MKYFWDGT+ QWLSG LAGKPA VFTSTGSLHGGQE+TLLSMM+PLLHHGML++G+PYT Sbjct: 80 PMKYFWDGTSSQWLSGTLAGKPACVFTSTGSLHGGQETTLLSMMLPLLHHGMLLLGIPYT 139 Query: 121 QPELMSTSSGGSPYGASHWAGVNGNQAISDDTRALAVALGRRLAQNAIKLQ 171 Q ELM+TSSGG+PYGASHW+GV+G QAIS DTRALA+ALG+RLA AIKL+ Sbjct: 140 QAELMTTSSGGTPYGASHWSGVSGTQAISADTRALAIALGQRLAHTAIKLR 190