BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0027.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 163 1e-38 ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 156 1e-36 ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transduce... 154 4e-36 ref|YP_004682082.1| hypothetical protein CNE_2c18940 [Cupriavidu... 147 6e-34 ref|YP_968609.1| methyl-accepting chemotaxis sensory transducer ... 146 2e-33 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 82/170 (48%), Positives = 114/170 (67%), Gaps = 2/170 (1%) Query: 1 MNVIGNMKIGKRLGLGFAIILALSVLIAVIGVWRLQSVAKATQAMMDVPLAKERMIGDWY 60 MN+IGNM IG+RL LGFA+IL S++IA IG+WRL VA+AT+ MM PL ER++ DWY Sbjct: 1 MNIIGNMNIGRRLTLGFALILTFSIIIAGIGLWRLDHVAQATREMMAEPLKTERLMADWY 60 Query: 61 RHTYSGIRRATAVAKSSDPSLSAFFKPETDEATRISTELQKKILELLVSDEEKQLYEKIM 120 + +GIRR A+AKSSDP+L +F E +++ S E QK++ LL + EEK L++KI Sbjct: 61 TNLVAGIRRTIAIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKIG 120 Query: 121 SLRKVYLAKRDVIYKAKGEPNPDPAMIADALEKDYLPAAKNYSTEVENLL 170 LRK+YL+ RD I KAK N + AM L++ ++P A Y + L+ Sbjct: 121 ELRKLYLSSRDEINKAKAAGNTEEAM--RILDQVFVPNATAYQDTMRKLV 168 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/172 (48%), Positives = 106/172 (61%), Gaps = 2/172 (1%) Query: 1 MNVIGNMKIGKRLGLGFAIILALSVLIAVIGVWRLQSVAKATQAMMDVPLAKERMIGDWY 60 M + +MKIGKRLG GFA++LA +VLI IGVW+L ++ AT+ M PLAKER+I DW Sbjct: 1 MKIFASMKIGKRLGFGFAVVLAFAVLITGIGVWQLNALGNATREMTREPLAKERLISDWS 60 Query: 61 RHTYSGIRRATAVAKSSDPSLSAFFKPETDEATRISTELQKKILELLVSDEEKQLYEKIM 120 R+ + R TAVAKSSDPSL FF E T+ ++ L K+I LL S EEK L+ K+ Sbjct: 61 RNINVAVIRTTAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVS 120 Query: 121 SLRKVYLAKRDVIYKAKGEPNPDPAMIADALEKDYLPAAKNYSTEVENLLAL 172 +RK YL+ RD + K K + D A LE Y+PAA NY V L L Sbjct: 121 DVRKAYLSSRDQVTKLKADGQADEAN--RLLESTYIPAADNYMKLVSEFLGL 170 >ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] gb|EER57813.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] Length = 527 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 82/167 (49%), Positives = 108/167 (64%), Gaps = 2/167 (1%) Query: 6 NMKIGKRLGLGFAIILALSVLIAVIGVWRLQSVAKATQAMMDVPLAKERMIGDWYRHTYS 65 N+KIG RLG GFA++LAL VL+ + G+WRLQ+VA+AT M PLA ERMI DWYR+ YS Sbjct: 3 NLKIGTRLGGGFALVLALMVLMTLFGLWRLQTVAQATNDMTQQPLAMERMISDWYRYVYS 62 Query: 66 GIRRATAVAKSSDPSLSAFFKPETDEATRISTELQKKILELLVSDEEKQLYEKIMSLRKV 125 G RR TA+ KS+DPSL+ FF + +TR S +LQ +I LL + EK+L+ I R Sbjct: 63 GARRTTAIVKSTDPSLAGFFAEDAAMSTRESGKLQDRIEPLLSNPAEKELWVTIKKARVT 122 Query: 126 YLAKRDVIYKAKGEPNPDPAMIADALEKDYLPAAKNYSTEVENLLAL 172 YL+ RD KAK + + A L + YLPAA+ Y ++ LL L Sbjct: 123 YLSSRDQAVKAKADGQLEEA--ERTLTQVYLPAAEKYMALIQQLLDL 167 >ref|YP_004682082.1| hypothetical protein CNE_2c18940 [Cupriavidus necator N-1] gb|AEI80850.1| methyl-accepting chemotaxis protein I [Cupriavidus necator N-1] Length = 513 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 2/165 (1%) Query: 6 NMKIGKRLGLGFAIILALSVLIAVIGVWRLQSVAKATQAMMDVPLAKERMIGDWYRHTYS 65 N+ IG RLG+GF ++L LS L+ V G+ RLQ VA+ T AMM PL KER++ DWYR ++ Sbjct: 3 NLGIGVRLGIGFGVVLLLSALMTVFGMMRLQQVAERTHAMMQQPLTKERLVSDWYRLMHT 62 Query: 66 GIRRATAVAKSSDPSLSAFFKPETDEATRISTELQKKILELLVSDEEKQLYEKIMSLRKV 125 +RR TAVA+S+DPSL AFF ET + L+ K+ +L S EEK ++KI+S+R Sbjct: 63 SVRRTTAVARSADPSLGAFFAAETKASIEGIAALRDKLQPMLSSAEEKAAFQKILSVRDP 122 Query: 126 YLAKRDVIYKAKGEPNPDPAMIADALEKDYLPAAKNYSTEVENLL 170 Y RD I K K E + A LEKD++PA Y E++ LL Sbjct: 123 YNNGRDKITKLKQEGLTEEAN--QVLEKDFVPAGDAYLGEIQKLL 165 >ref|YP_968609.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] gb|ABM30835.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] Length = 592 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/167 (48%), Positives = 100/167 (59%), Gaps = 2/167 (1%) Query: 6 NMKIGKRLGLGFAIILALSVLIAVIGVWRLQSVAKATQAMMDVPLAKERMIGDWYRHTYS 65 N+ IG RL GFA++L L L+ V G+WRL SVA+AT M PLA ERMI DWYR+ S Sbjct: 3 NLSIGTRLAGGFALVLGLMALMTVFGLWRLHSVAQATHDMTQQPLANERMISDWYRYVDS 62 Query: 66 GIRRATAVAKSSDPSLSAFFKPETDEATRISTELQKKILELLVSDEEKQLYEKIMSLRKV 125 RR TA+ KSSDPSL+AFF ++ TR S +L +KI L S EEK ++ I R Sbjct: 63 AARRTTAIVKSSDPSLAAFFAEDSAMTTRESAQLVEKIEPQLDSTEEKAVWADIAKARSA 122 Query: 126 YLAKRDVIYKAKGEPNPDPAMIADALEKDYLPAAKNYSTEVENLLAL 172 YLA RD KAK E + A L + YLPA K Y ++ LL L Sbjct: 123 YLASRDQAVKAKAEGRTEEA--ERLLTQVYLPATKAYVALIQQLLDL 167