BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0012.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_998699.1| ABC transporter-like protein [Verminephrobacter... 541 e-152 gb|EGH99061.1| ABC transporter related protein [Pseudomonas syri... 425 e-117 ref|ZP_04934501.1| hypothetical protein PA2G_01868 [Pseudomonas ... 417 e-115 ref|YP_001155775.1| nitrate ABC transporter, ATPase subunits C a... 400 e-109 ref|YP_001022673.1| putative nitrate transport system ATP-bindin... 395 e-108 >ref|YP_998699.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM59681.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 292 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 264/292 (90%), Positives = 272/292 (93%), Gaps = 1/292 (0%) Query: 1 MEKAFLTVENLNKRYTDDGLPVFDQVSFGIDKGEFVCIIGHSGCGKTTILNVLAGLEAPS 60 M KAFL V+NL+KRYTDDG PVFD+VSFGIDKGEF CIIGHSGCGKTTILNVLAGLEA S Sbjct: 1 MGKAFLIVDNLSKRYTDDGPPVFDKVSFGIDKGEFACIIGHSGCGKTTILNVLAGLEASS 60 Query: 61 GGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWSRDKAETHARRF 120 GGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGN+VFAVRSRWPDW RDKAE HARRF Sbjct: 61 GGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNIVFAVRSRWPDWPRDKAEEHARRF 120 Query: 121 IEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 180 I MVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL Sbjct: 121 IAMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 180 Query: 181 KICSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRETMHHDPQ 240 KICSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRE MHHDPQ Sbjct: 181 KICSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRENMHHDPQ 240 Query: 241 FYRIRNHLVDFLVHRSRRIQEAGAEDAGTRVVTPGLEQSAPDPLD-NFPQAA 291 FYRIRNHLVDFLVHRSR+IQEAGA DA R++ PGLE+ P NFPQAA Sbjct: 241 FYRIRNHLVDFLVHRSRQIQEAGAGDAVARMIMPGLEEGIPAQTSGNFPQAA 292 >gb|EGH99061.1| ABC transporter related protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 304 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 197/280 (70%), Positives = 237/280 (84%), Gaps = 1/280 (0%) Query: 5 FLTVENLNKRYTDDGLPVFDQVSFGIDKGEFVCIIGHSGCGKTTILNVLAGLEAPSGGVV 64 F+ VE L K+Y D PVF+ ++FGI KGEFVCIIGHSGCGK+TILNV+AGLE + G V Sbjct: 11 FIKVEGLTKQYRADLPPVFENINFGIQKGEFVCIIGHSGCGKSTILNVIAGLEEATSGGV 70 Query: 65 IMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWSRDKAETHARRFIEMV 124 +M +E+ GPSLDRGVVFQSHAL+PW +V N+ FAVRSR PDWSR + H +F+++V Sbjct: 71 VMAGKEISGPSLDRGVVFQSHALLPWLTVEDNIAFAVRSRHPDWSRKQVIEHGAKFLDLV 130 Query: 125 GLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELLKICS 184 GLK A KKPSELSGGMKQRVGIARAFS+EPKMLLMDEPFGALDALTRGV+QDELLKIC+ Sbjct: 131 GLKSAAKKKPSELSGGMKQRVGIARAFSVEPKMLLMDEPFGALDALTRGVIQDELLKICA 190 Query: 185 ATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRETMHHDPQFYRI 244 AT QTVFMITHDVDE+ILLADKI LMSNGP AR+AE+V+NT+P+ R+RET+HHDPQFYR+ Sbjct: 191 ATKQTVFMITHDVDESILLADKIMLMSNGPHARVAEIVINTIPRDRSRETIHHDPQFYRL 250 Query: 245 RNHLVDFLVHRSRRIQEAG-AEDAGTRVVTPGLEQSAPDP 283 RNHLVDFLV RS+ IQ++G A+++ +V PGLE++ P P Sbjct: 251 RNHLVDFLVRRSKEIQQSGSAQNSEPLIVRPGLEENTPPP 290 >ref|ZP_04934501.1| hypothetical protein PA2G_01868 [Pseudomonas aeruginosa 2192] gb|EAZ58620.1| hypothetical protein PA2G_01868 [Pseudomonas aeruginosa 2192] Length = 301 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/276 (71%), Positives = 229/276 (82%), Gaps = 2/276 (0%) Query: 3 KAFLTVENLNKRYTDDGLPVFDQVSFGIDKGEFVCIIGHSGCGKTTILNVLAGLEAPSGG 62 KAFL VE L+KRY PVF+ ++F +++GEFVC+IGHSGCGK+TILNVLAGLE PS G Sbjct: 4 KAFLKVEGLSKRYQPSQPPVFENINFSLEQGEFVCVIGHSGCGKSTILNVLAGLEEPSSG 63 Query: 63 VVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWSRDKAETHARRFIE 122 V+M +E+ GPSLDRGVVFQ HALMPW +V N+ FAV+SR P WSR + H RFIE Sbjct: 64 GVVMAGKEIAGPSLDRGVVFQGHALMPWLTVEQNIAFAVKSRHPSWSRQQIAEHGARFIE 123 Query: 123 MVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELLKI 182 MVGL GA KKP+ELSGGMKQRVGIARAF++EPKMLLMDEPFGALDALTRGV+QDEL+KI Sbjct: 124 MVGLTGAAQKKPAELSGGMKQRVGIARAFAVEPKMLLMDEPFGALDALTRGVIQDELVKI 183 Query: 183 CSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRETMHHDPQFY 242 C+AT QTVFMITHDVDEAILLADK+ LMSNGP ARIAE+V+NT+P+ RTRET+HHDPQFY Sbjct: 184 CAATRQTVFMITHDVDEAILLADKVMLMSNGPNARIAEIVINTLPRERTRETIHHDPQFY 243 Query: 243 RIRNHLVDFLVHRSRRIQEAGAEDAGTR--VVTPGL 276 RIRNHLVDFLV RS+ IQ+ G + +V PGL Sbjct: 244 RIRNHLVDFLVRRSKTIQQGVEGVLGDQPLIVRPGL 279 >ref|YP_001155775.1| nitrate ABC transporter, ATPase subunits C and D [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34211.1| nitrate ABC transporter, ATPase subunits C and D [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 287 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/281 (67%), Positives = 229/281 (81%), Gaps = 4/281 (1%) Query: 1 MEKAFLTVENLNKRYTDDGLPVFDQVSFGIDKGEFVCIIGHSGCGKTTILNVLAGLEAPS 60 +E FL V NL+K Y D PVF+ + F I+KGEFVCIIGHSGCGKTTILNVLAGLE + Sbjct: 3 IENTFLKVSNLSKSYKADAPPVFEGIDFEIEKGEFVCIIGHSGCGKTTILNVLAGLEEAT 62 Query: 61 GGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWSRDKAETHARRF 120 GG IM + ++GP L+RGVVFQ HALMPW +VL NV FAV+S++PDWS+++ H++++ Sbjct: 63 GGNAIMLGKRIQGPGLERGVVFQGHALMPWMTVLQNVAFAVKSKYPDWSKEQITEHSKKY 122 Query: 121 IEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 180 + MVGL AE+KKPSELSGGMKQRVGIARAF+IEPKMLL+DEPFGALDALTRGV+QDELL Sbjct: 123 LAMVGLVNAENKKPSELSGGMKQRVGIARAFAIEPKMLLLDEPFGALDALTRGVIQDELL 182 Query: 181 KICSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRETMHHDPQ 240 KIC T+QTVFMITHDVDEAILL+DKI LMSNGP ARIAE+VVNT+PK R R +HHD Sbjct: 183 KICKETNQTVFMITHDVDEAILLSDKIMLMSNGPNARIAEIVVNTLPKGRKRANLHHDAM 242 Query: 241 FYRIRNHLVDFLVHRSRRIQEAGA--EDAGTR--VVTPGLE 277 +Y +RNHLVDFLV+RS+ +Q GA E G + +V PG++ Sbjct: 243 YYPMRNHLVDFLVNRSKDLQVKGAKGELDGYKPVIVLPGVD 283 >ref|YP_001022673.1| putative nitrate transport system ATP-binding protein [Methylibium petroleiphilum PM1] gb|ABM96438.1| putative nitrate transport system ATP-binding protein [Methylibium petroleiphilum PM1] Length = 308 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/273 (69%), Positives = 217/273 (79%), Gaps = 1/273 (0%) Query: 5 FLTVENLNKRYTDDGLPVFDQVSFGIDKGEFVCIIGHSGCGKTTILNVLAGLEAPSGGVV 64 FL +E L K Y PVFD V+FG+ KGEFVCI+GHSGCGKTTILNVLAGLE S G V Sbjct: 9 FLKIEGLAKTYPGSSEPVFDGVNFGVAKGEFVCIVGHSGCGKTTILNVLAGLEQASAGHV 68 Query: 65 IMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWSRDKAETHARRFIEMV 124 MD REV GPSL+RGVVFQ HALMPW SV N+ FAVRS+WPDW+ + E +++ MV Sbjct: 69 FMDGREVAGPSLERGVVFQGHALMPWLSVRRNIAFAVRSKWPDWAASQVEAQVEKYVTMV 128 Query: 125 GLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELLKICS 184 GL A KKPS LSGGMKQRVGIARAF+IEPKMLL+DEPFGALDALTRG +QDELLKIC+ Sbjct: 129 GLGHAIDKKPSALSGGMKQRVGIARAFAIEPKMLLLDEPFGALDALTRGSIQDELLKICA 188 Query: 185 ATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRETMHHDPQFYRI 244 THQTVFMITHDVDEAILLADKI LMSNGP+AR+AE+V NTMP+ R R T+HHDPQ+YRI Sbjct: 189 ETHQTVFMITHDVDEAILLADKILLMSNGPQARVAEIVRNTMPRDRQRATLHHDPQYYRI 248 Query: 245 RNHLVDFLVHRSRRIQEAGAEDAGTRVVTPGLE 277 RNHLVDFLV RS+ + G A V PG++ Sbjct: 249 RNHLVDFLVARSKDLAH-GRAPAFPPEVHPGVD 280