BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0007.p (430 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001022683.1| signal transduction histidine kinase-like pr... 439 e-121 emb|CBA30613.1| hypothetical protein Csp_C24430 [Curvibacter put... 430 e-118 ref|YP_547157.1| PAS/PAC sensor signal transduction histidine ki... 419 e-115 ref|YP_524975.1| PAS/PAC sensor signal transduction histidine ki... 405 e-111 ref|ZP_08405890.1| PAS/PAC sensor signal transduction histidine ... 392 e-107 >ref|YP_001022683.1| signal transduction histidine kinase-like protein [Methylibium petroleiphilum PM1] gb|ABM96448.1| signal transduction histidine kinase-like protein [Methylibium petroleiphilum PM1] Length = 410 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 233/413 (56%), Positives = 285/413 (69%), Gaps = 43/413 (10%) Query: 24 DATLLRDKLTLLLDSTGEGIYGIDLDGRCTFIKGGGGGGEMLGYRIEXLAAGAEMLGYRI 83 D T +D+LTLLL+STG+GI+GID+DG CTF+ A A+ LGYR Sbjct: 25 DGTPWQDRLTLLLESTGDGIFGIDIDGCCTFMN----------------RAAAQGLGYRT 68 Query: 84 EQMLGKNMHELVHHSHEHGEHYPEEDCPILKAFRKGESCRVDQEVFWRADGTCFATEYSS 143 E++LG+NMH L+HHSH +G HY E DCPI AFR+G CR+D EV WRAD + F EYSS Sbjct: 69 EEVLGRNMHALIHHSHGNGAHYAEADCPIFNAFRRGLPCRIDHEVLWRADDSSFQAEYSS 128 Query: 144 YQIIDGGRVRGAVITFSDISKRRLAEEQLQRAKAELE-------QRVAERTRELSAALMQ 196 Y I++ G V GAV+TF DI+ R+ AEEQL RAK ELE QRVAERTR LS AL Q Sbjct: 129 YPIVEAGAVVGAVVTFVDITARKQAEEQLVRAKRELERTNDRLEQRVAERTRALSDALAQ 188 Query: 197 VRELSAHAHSVREDERTRIAREIHDELGSLLVALKLDVNWMAGRVADREPVARKCASMNR 256 R LSA+ +VRE+ERTRIAREIHDELGSLLVALK+DVNW+ RVADR P+A KC M Sbjct: 189 RRRLSAYLETVREEERTRIAREIHDELGSLLVALKMDVNWLEKRVADRLPLAAKCEGMGA 248 Query: 257 LIEAAVDNVGRIITDLRPSILDHQGLVAALEWQVQEFSEATELPCDVEFDISPQAFAPQG 316 LI+ AVD VGRIITDLRPSILDHQGL AALEWQ QE+ E+ EL D++ ++ P+G Sbjct: 249 LIDTAVDKVGRIITDLRPSILDHQGLWAALEWQAQEWLESAELEADIQVHVAAGVAPPEG 308 Query: 317 TLATAAFRIFQEMLSNVAQHSQATQV--KIVVRLTPDALL-MEVEDNGVGVPAAALANPK 373 A A FRIFQE+LSN+A+H++A +V +IVV P+ +L ++V D+GVG A AL +P+ Sbjct: 309 GSAIAVFRIFQELLSNIARHAKARRVGIRIVVDAPPEPVLYLDVRDDGVGTTAEALNDPR 368 Query: 374 SYGVMGMRERALHFAGALNIENAVDGAKEAGVAPESGKSIRNPGTRVRLVLPL 426 SYGVMGMRERA HF G L I++A GT VRLV+PL Sbjct: 369 SYGVMGMRERAAHFGGRLTIDSAP-----------------GQGTLVRLVMPL 404 >emb|CBA30613.1| hypothetical protein Csp_C24430 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 400 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/383 (56%), Positives = 265/383 (69%), Gaps = 29/383 (7%) Query: 27 LLRDKLTLLLDSTGEGIYGIDLDGRCTFIKGGGGGGEMLGYRIEXLAAGAEMLGYRIEQM 86 L RD+L+LLL+STGEGI+GID++GRCTFI AGA MLGY ++ Sbjct: 20 LWRDRLSLLLESTGEGIFGIDMNGRCTFIN----------------RAGAAMLGYESHEV 63 Query: 87 LGKNMHELVHHSHEHGEHYPEEDCPILKAFRKGESCRVDQEVFWRADGTCFATEYSSYQI 146 LG NMHEL HHSH GEHYPE CPI AFRK CR+D E+FWR DG+ FA EYSS+ I Sbjct: 64 LGANMHELAHHSHPGGEHYPEHTCPIFNAFRKALPCRIDTELFWRRDGSAFAVEYSSHPI 123 Query: 147 IDGGRVRGAVITFSDISKRRLAEEQLQRAKAELEQRVAERTRELSAALMQVRELSAHAHS 206 +D G V+GAV+TF DIS RR AEE L+RA ELEQRV ERT+ LS AL Q+REL+A++HS Sbjct: 124 VDSGLVQGAVVTFVDISARRNAEEALRRAHTELEQRVEERTQALSEALQQLRELTAYSHS 183 Query: 207 VREDERTRIAREIHDELGSLLVALKLDVNWMAGRVAD------------REPVARKCASM 254 VRE+ERTRIARE+HDELGSLLVALK+DV W+ R+ + R+ + KC +M Sbjct: 184 VREEERTRIAREVHDELGSLLVALKMDVGWLEKRLGEQPGRAPDAAQAMRDQMQHKCRNM 243 Query: 255 NRLIEAAVDNVGRIITDLRPSILDHQGLVAALEWQVQEFSEATELPCDVEFDISPQAFAP 314 ++LIEAAVDNVGRIITDLRPSILDHQGL AL+WQ EF ++ E+ D D+S P Sbjct: 244 SQLIEAAVDNVGRIITDLRPSILDHQGLWVALDWQAHEFVQSAEMGLDWHMDVSAAQPVP 303 Query: 315 QGTLATAAFRIFQEMLSNVAQHSQATQVKIVVRLTPDALLMEVEDNGVGVPAAALANPKS 374 T A FRIFQEMLSNV +H+QAT + I +R + + V+DNG G P A P + Sbjct: 304 D-THTIAIFRIFQEMLSNVGRHAQATHLDISIRADASDITISVKDNGRGAPMQAFDAPDA 362 Query: 375 YGVMGMRERALHFAGALNIENAV 397 YG+MGMRERA H G+L I + + Sbjct: 363 YGIMGMRERARHLGGSLEIASQI 385 >ref|YP_547157.1| PAS/PAC sensor signal transduction histidine kinase [Polaromonas sp. JS666] gb|ABE42259.1| PAS/PAC sensor signal transduction histidine kinase [Polaromonas sp. JS666] Length = 410 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 218/384 (56%), Positives = 267/384 (69%), Gaps = 29/384 (7%) Query: 26 TLLRDKLTLLLDSTGEGIYGIDLDGRCTFIKGGGGGGEMLGYRIEXLAAGAEMLGYRIEQ 85 + RDKL+ LL+STGEGI+GID+DGRCTFI AGAE LG+ + Sbjct: 29 VVWRDKLSQLLESTGEGIFGIDMDGRCTFIN----------------RAGAEQLGWLPAE 72 Query: 86 MLGKNMHELVHHSHEHGEHYPEEDCPILKAFRKGESCRVDQEVFWRADGTCFATEYSSYQ 145 +LG NMHEL HHSH G HYPE CPI AFRK CR+D E+FWR +G+ FA EYSSY Sbjct: 73 VLGHNMHELAHHSHAGGAHYPEHLCPIFNAFRKALPCRIDTELFWRKNGSAFAVEYSSYP 132 Query: 146 IIDGGRVRGAVITFSDISKRRLAEEQLQRAKAELEQRVAERTRELSAALMQVRELSAHAH 205 I++GG V+GAV+TF DIS RR AE+ L++A A LEQRV+ERT+ LS AL Q+REL+A+ H Sbjct: 133 IVEGGVVQGAVVTFVDISARRQAEDALRQAHAVLEQRVSERTQALSEALEQLRELTAYTH 192 Query: 206 SVREDERTRIAREIHDELGSLLVALKLDVNWMAGRVAD------------REPVARKCAS 253 SVREDERTRIARE+HDELGSLLVALK+DV W+ R+ + RE + KC + Sbjct: 193 SVREDERTRIAREVHDELGSLLVALKMDVGWLDKRLGEQQQRSLDEAQSMRERMRSKCQN 252 Query: 254 MNRLIEAAVDNVGRIITDLRPSILDHQGLVAALEWQVQEFSEATELPCDVEFDISPQAFA 313 M RLIEAAVDNVGRIITDLRPSILDHQGL AAL+WQ EF + EL D + D++ A Sbjct: 253 MGRLIEAAVDNVGRIITDLRPSILDHQGLWAALDWQAHEFVLSAELALDWQMDVAGAAPL 312 Query: 314 PQGTLATAAFRIFQEMLSNVAQHSQATQVKIVVRLTPDALLMEVEDNGVGVPAAALANPK 373 P+ A FRIFQEMLSNV +H+QA++V I ++ TP + + V DNG G AAA Sbjct: 313 PEQA-AIGIFRIFQEMLSNVGRHAQASRVAITIQATPRDISIAVRDNGKGAEAAAFEAAN 371 Query: 374 SYGVMGMRERALHFAGALNIENAV 397 +YGVMGMRERA H G L+I + + Sbjct: 372 AYGVMGMRERARHLGGTLDISSQI 395 >ref|YP_524975.1| PAS/PAC sensor signal transduction histidine kinase [Rhodoferax ferrireducens T118] gb|ABD71444.1| PAS/PAC sensor signal transduction histidine kinase [Rhodoferax ferrireducens T118] Length = 412 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/383 (55%), Positives = 262/383 (68%), Gaps = 29/383 (7%) Query: 27 LLRDKLTLLLDSTGEGIYGIDLDGRCTFIKGGGGGGEMLGYRIEXLAAGAEMLGYRIEQM 86 +L+ +L LLL+STGEGIYGID++GRCTFI AGA M+G E++ Sbjct: 32 VLQKQLALLLESTGEGIYGIDMEGRCTFIN----------------RAGANMIGREPEEV 75 Query: 87 LGKNMHELVHHSHEHGEHYPEEDCPILKAFRKGESCRVDQEVFWRADGTCFATEYSSYQI 146 LG NMHEL HHSH G+ Y DC I AFR+G CR+D EVFW D CF EYSSY + Sbjct: 76 LGCNMHELTHHSHPGGQPYAAHDCAIFNAFRQGLPCRIDTEVFWHRDQHCFPVEYSSYPL 135 Query: 147 IDGGRVRGAVITFSDISKRRLAEEQLQRAKAELEQRVAERTRELSAALMQVRELSAHAHS 206 +DG V GAVITF DI++R+ A + LQ AK ELEQRV+ERT+ELS AL Q+RELSA++ + Sbjct: 136 MDGDTVLGAVITFVDITERKRAADALQLAKNELEQRVSERTQELSVALGQLRELSAYSEN 195 Query: 207 VREDERTRIAREIHDELGSLLVALKLDVNWMAGRVAD------------REPVARKCASM 254 VREDERTRIARE+HDELGSLLVALK+DVNWM R+++ R + KC +M Sbjct: 196 VREDERTRIAREVHDELGSLLVALKMDVNWMDKRLSEQQQRTPHEAEAMRTRLRSKCRNM 255 Query: 255 NRLIEAAVDNVGRIITDLRPSILDHQGLVAALEWQVQEFSEATELPCDVEFDISPQAFAP 314 + LIE AVDNVGRIITDLRPSILDHQGL AALEWQ EF+++ EL D + + P Sbjct: 256 SGLIERAVDNVGRIITDLRPSILDHQGLWAALEWQAHEFAQSAELALDWDMQGTDGVELP 315 Query: 315 QGTLATAAFRIFQEMLSNVAQHSQATQVKIVVRLTPDALLMEVEDNGVGVPAAALANPKS 374 + A A FRIFQEMLSNVA+H+QA + + +++ + L + V+DNG G A A P + Sbjct: 316 EPE-AMAVFRIFQEMLSNVARHAQAMALTLRIQVEAEVLTISVQDNGCGANALAFEAPTA 374 Query: 375 YGVMGMRERALHFAGALNIENAV 397 YGVMGMRERA HF G L I + + Sbjct: 375 YGVMGMRERARHFGGQLEISSQI 397 >ref|ZP_08405890.1| PAS/PAC sensor signal transduction histidine kinase [Hylemonella gracilis ATCC 19624] gb|EGI77011.1| PAS/PAC sensor signal transduction histidine kinase [Hylemonella gracilis ATCC 19624] Length = 397 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 204/379 (53%), Positives = 255/379 (67%), Gaps = 27/379 (7%) Query: 27 LLRDKLTLLLDSTGEGIYGIDLDGRCTFIKGGGGGGEMLGYRIEXLAAGAEMLGYRIEQM 86 L RD+L LLL+STGEG++G++L GRC FI AAGA MLGY ++ Sbjct: 20 LWRDRLALLLESTGEGMFGVNLAGRCIFIN----------------AAGARMLGYEPVEV 63 Query: 87 LGKNMHELVHHSHEHGEHYPEEDCPILKAFRKGESCRVDQEVFWRADGTCFATEYSSYQI 146 +G+NMHEL+HH+ + G+ Y E DCPI AFR+G+SCR+D EV WR DGT F EY+S+ + Sbjct: 64 IGRNMHELIHHTRQDGQPYHERDCPIFNAFRQGQSCRIDNEVLWRRDGTSFPAEYTSHPV 123 Query: 147 IDGGRVRGAVITFSDISKRRLAEEQLQRAKAELEQRVAERTRELSAALMQVRELSAHAHS 206 +D G V GA+ T DI+ R+ A + L+RAK ELE RV ERTRELS AL Q+R+LSA S Sbjct: 124 VDNGMVLGAMATIVDITPRKQAADALRRAKEELELRVDERTRELSDALSQMRKLSAWLDS 183 Query: 207 VREDERTRIAREIHDELGSLLVALKLDVNWMAGRVAD----------REPVARKCASMNR 256 REDERTRIARE+HDELGSLLVALK+DVNW+A R+ + RE + KC M+R Sbjct: 184 AREDERTRIAREVHDELGSLLVALKMDVNWLAKRLGETPAPDEADALRERLRCKCHGMSR 243 Query: 257 LIEAAVDNVGRIITDLRPSILDHQGLVAALEWQVQEFSEATELPCDVEFDISPQAFAPQG 316 +IE AV+NVGRIITDLRPSILDHQGL AALEWQ QEF ++ EL + D+ P+ Sbjct: 244 MIENAVENVGRIITDLRPSILDHQGLWAALEWQAQEFVQSAELDLTWQMDVQAGVELPEP 303 Query: 317 TLATAAFRIFQEMLSNVAQHSQATQVKIVVRLTPDALLMEVEDNGVGVPAAALANPKSYG 376 A A FRIFQEMLSNV +H+QA V I + L + V D+G G A +YG Sbjct: 304 A-AMAVFRIFQEMLSNVGRHAQARAVAIRIEADACQLRLSVRDDGRGAAPEAFEAATAYG 362 Query: 377 VMGMRERALHFAGALNIEN 395 VMGMRERA HF G + I++ Sbjct: 363 VMGMRERARHFGGQVTIDS 381