BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0006.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776704.1| 3-ketoacyl-CoA reductase [Herbaspirillum ser...   263   5e-69
ref|YP_004154212.1| short-chain dehydrogenase/reductase sdr [Var...   224   3e-57
ref|YP_002943636.1| short-chain dehydrogenase/reductase SDR [Var...   221   3e-56
ref|YP_573809.1| short-chain dehydrogenase/reductase SDR [Chromo...   194   3e-48
ref|YP_002984787.1| short-chain dehydrogenase/reductase SDR [Rhi...   193   7e-48

>ref|YP_003776704.1| 3-ketoacyl-CoA reductase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64796.1| 3-ketoacyl-CoA reductase protein [Herbaspirillum seropedicae SmR1]
          Length = 253

 Score =  263 bits (673), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 132/141 (93%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + INARSVVAFTRAVIPVMR QGGGNIINVTSVAARHGGGPGALIYAASKGFVST+TRGM
Sbjct: 113 ININARSVVAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTLTRGM 172

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           AKEL  D IRVNAVAPGVIMTPFQERFTTPEQLE FRKTIPMGRIG+P EC GAFLYLAS
Sbjct: 173 AKELLADKIRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLAS 232

Query: 121 DALSGYVTGQIIDVNGGQYMP 141
           + +SGYVTGQIIDVNGGQYMP
Sbjct: 233 EQMSGYVTGQIIDVNGGQYMP 253


>ref|YP_004154212.1| short-chain dehydrogenase/reductase sdr [Variovorax paradoxus EPS]
 gb|ADU36101.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus EPS]
          Length = 253

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 121/141 (85%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + INARSV+AF R V+P+MR QGGGNIINVTSVAAR GGGP A +YA SKGFVST T G+
Sbjct: 113 MHINARSVLAFCREVVPLMRTQGGGNIINVTSVAARTGGGPAAYLYAGSKGFVSTATHGL 172

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           AKEL  D IRVNAVAPGVI TPFQ+RF+TP  LE+FR +IPMGRIG+P EC GAFLYLAS
Sbjct: 173 AKELVGDRIRVNAVAPGVIQTPFQDRFSTPAMLENFRASIPMGRIGEPEECVGAFLYLAS 232

Query: 121 DALSGYVTGQIIDVNGGQYMP 141
           + LSGYVTGQ+I+VNGGQYMP
Sbjct: 233 EQLSGYVTGQVIEVNGGQYMP 253


>ref|YP_002943636.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110]
 gb|ACS18370.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110]
          Length = 253

 Score =  221 bits (563), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 118/141 (83%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + INARSV+AF R  +P+MR  GGGNIINVTSVAAR GGGPGA +YA SKGFVST T G+
Sbjct: 113 MHINARSVLAFAREAVPLMRTHGGGNIINVTSVAARTGGGPGAYLYAGSKGFVSTATHGL 172

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           A+EL  D IRVNAVAPGVI TPFQ+RF+TP  LESFR  IPMGRIG P EC GAFLYLAS
Sbjct: 173 ARELVGDRIRVNAVAPGVIQTPFQDRFSTPAMLESFRTAIPMGRIGSPDECVGAFLYLAS 232

Query: 121 DALSGYVTGQIIDVNGGQYMP 141
           + LSGYVTGQ+I+VNGGQYMP
Sbjct: 233 EQLSGYVTGQVIEVNGGQYMP 253


>ref|YP_573809.1| short-chain dehydrogenase/reductase SDR [Chromohalobacter
           salexigens DSM 3043]
 gb|ABE59110.1| short-chain dehydrogenase/reductase SDR [Chromohalobacter
           salexigens DSM 3043]
          Length = 255

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 114/142 (80%), Gaps = 1/142 (0%)

Query: 1   VQINARSVVAFTRAVIPVMRKQG-GGNIINVTSVAARHGGGPGALIYAASKGFVSTITRG 59
           + +N RSV   TRA +   R+QG GGNIIN TSVAAR+GGGPGA +YA++K FVS+ TRG
Sbjct: 114 MDLNVRSVTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLYASAKAFVSSFTRG 173

Query: 60  MAKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLA 119
           MAKEL  D +RVNAVAPGVI+TPF +R ++  QLE+ R  IPMGR+G P EC GAFL+LA
Sbjct: 174 MAKELAGDGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLA 233

Query: 120 SDALSGYVTGQIIDVNGGQYMP 141
           SDA+SGYVTGQI++VNGGQ MP
Sbjct: 234 SDAMSGYVTGQILEVNGGQLMP 255


>ref|YP_002984787.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gb|ACS59825.1| short-chain dehydrogenase/reductase SDR [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 264

 Score =  193 bits (491), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 96/141 (68%), Positives = 114/141 (80%), Gaps = 1/141 (0%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + +NARSV+A TRA  P ++KQGG  IIN TS+AAR+GGG GA++YAASKGFVSTITRG 
Sbjct: 125 MDLNARSVLAATRAAHPWLKKQGG-FIINTTSIAARNGGGNGAILYAASKGFVSTITRGH 183

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           AKE  PD IRVNAVAPGVI TPF ER+T  EQ+E  RK+IPMG +G   +C GA+L+LAS
Sbjct: 184 AKEFVPDRIRVNAVAPGVIATPFHERYTNDEQMELQRKSIPMGFVGTSEDCVGAYLFLAS 243

Query: 121 DALSGYVTGQIIDVNGGQYMP 141
             LSGY+TGQII+VNGGQ MP
Sbjct: 244 PTLSGYITGQIIEVNGGQLMP 264