BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0043.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776371.1| GntR family transcription regulator protein ... 465 e-129 ref|YP_004752400.1| transcriptional regulator [Collimonas fungiv... 374 e-101 ref|YP_001100060.1| GntR family transcriptional regulator [Hermi... 372 e-101 ref|YP_001353195.1| GntR family transcriptional regulator [Janth... 367 1e-99 ref|ZP_08273491.1| Transcriptional regulator, GntR family [Oxalo... 359 3e-97 >ref|YP_003776371.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64463.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/267 (85%), Positives = 243/267 (91%), Gaps = 6/267 (2%) Query: 1 MSSSLPNSNNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELIP 60 MSS LPNSNN+DA + G VA APTFSPLYQQIKA LI QRLE+GEWKPGELIP Sbjct: 74 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKA------LIMQRLEAGEWKPGELIP 127 Query: 61 SEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTDV 120 SEVELG+RFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHET AQFRFLRL AD+D Sbjct: 128 SEVELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDE 187 Query: 121 PQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKG 180 PQR ENKIIEVKRVRA AEVARQLDMKSGDSVIFI+RVKSFNGVP ILE+IWLPG IFKG Sbjct: 188 PQRPENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKG 247 Query: 181 LTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRAS 240 LTAERL+EY+GPLYGLFE+EFGTRMIRAEE+IRAVGADP++AE LGV PQTPLLSV+RAS Sbjct: 248 LTAERLVEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERAS 307 Query: 241 FTYGDKPVEMRRGLYLTLNYHYQSELN 267 FTYGDKPVEMRRGLYLT N+HYQSEL+ Sbjct: 308 FTYGDKPVEMRRGLYLTTNHHYQSELS 334 >ref|YP_004752400.1| transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61577.1| Transcriptional regulator [Collimonas fungivorans Ter331] Length = 307 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 189/271 (69%), Positives = 226/271 (83%), Gaps = 10/271 (3%) Query: 1 MSSSLPNSNNSD----AQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPG 56 + SS+P++ +SD + +V S + ++PTFSPLYQQIKA LI QRL+SGEWKPG Sbjct: 43 LMSSIPSNVSSDPAGQSAAVPASPSASSPTFSPLYQQIKA------LIMQRLQSGEWKPG 96 Query: 57 ELIPSEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTA 116 ELIPSEVELGNRFKVSQGTVRKAIDELAAENL+VRRQGKGTFVATHHE +QFRFLRL Sbjct: 97 ELIPSEVELGNRFKVSQGTVRKAIDELAAENLLVRRQGKGTFVATHHEARSQFRFLRLMP 156 Query: 117 DTDVPQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGL 176 D+D PQ + K+IE+KR+RAPAE+AR L MKSGDS +++KRV +F+GVPTILEE+WLPG Sbjct: 157 DSDQPQVTDKKVIELKRLRAPAEIARLLGMKSGDSAVYVKRVMAFDGVPTILEELWLPGA 216 Query: 177 IFKGLTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSV 236 +FK LT ERL+EYKGP+YGLFETEFGTRMIRA EQIRA AD ++A+LL V +PLL V Sbjct: 217 LFKALTLERLVEYKGPMYGLFETEFGTRMIRATEQIRAASADADAAQLLAVEKSSPLLCV 276 Query: 237 DRASFTYGDKPVEMRRGLYLTLNYHYQSELN 267 +R SFTYGDKPVE+RRGLY+T +HYQ+ELN Sbjct: 277 ERVSFTYGDKPVEVRRGLYVTNRHHYQNELN 307 >ref|YP_001100060.1| GntR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61935.1| Transcriptional regulator, GntR family [Herminiimonas arsenicoxydans] Length = 312 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/268 (67%), Positives = 217/268 (80%), Gaps = 7/268 (2%) Query: 1 MSSSLPN-SNNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELI 59 MSSS P+ S + AQ+ G S +PTFSPLYQQIKA LIT+ L+SGEW+PGELI Sbjct: 51 MSSSHPSLSIANPAQAAGASATVPSPTFSPLYQQIKA------LITKSLQSGEWRPGELI 104 Query: 60 PSEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTD 119 PSE+EL NRFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE AQFRFLRL D Sbjct: 105 PSEIELANRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVG 164 Query: 120 VPQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFK 179 Q EN + E +R+RAPA++ARQLD+K+GDSV F+KR++SF+G PTILEE+WLPG IFK Sbjct: 165 DAQYPENTVTEARRLRAPADIARQLDIKTGDSVFFVKRIQSFDGAPTILEELWLPGSIFK 224 Query: 180 GLTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRA 239 GL+ ER+++YKGP+Y L ETEFG +MIRA E IRAV AD +AELL +P TPLLSV+R Sbjct: 225 GLSLERVLQYKGPMYALLETEFGIQMIRAVENIRAVVADQSAAELLMLPLNTPLLSVNRV 284 Query: 240 SFTYGDKPVEMRRGLYLTLNYHYQSELN 267 SFTYGDK VE+RR LY+T N+HYQ+EL+ Sbjct: 285 SFTYGDKAVEVRRSLYVTNNHHYQNELS 312 >ref|YP_001353195.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89228.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 284 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 182/267 (68%), Positives = 216/267 (80%), Gaps = 10/267 (3%) Query: 3 SSLPNS--NNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELIP 60 SS P + NN+ A S G A +PTFSPLYQQIKA LIT+ L+SGEW+PGELIP Sbjct: 26 SSAPTTLPNNNAAGSAGG--ATPSPTFSPLYQQIKA------LITRSLQSGEWRPGELIP 77 Query: 61 SEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTDV 120 SEVEL RFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE AQFRFLRL D Sbjct: 78 SEVELATRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGE 137 Query: 121 PQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKG 180 P +N II+ KR+RAPA++ARQLD+K+GDSV+F+KRV+SF+G PTILEE+WLPG IFKG Sbjct: 138 PLYPDNTIIDAKRLRAPADIARQLDIKTGDSVVFLKRVQSFDGAPTILEELWLPGTIFKG 197 Query: 181 LTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRAS 240 L+ ER+++YKGP+Y L ETEFGT+MIRA E I+AV AD +A+LL +P TPLLSV R S Sbjct: 198 LSVERVLQYKGPMYALLETEFGTQMIRAVENIKAVVADQVTADLLSLPLNTPLLSVTRVS 257 Query: 241 FTYGDKPVEMRRGLYLTLNYHYQSELN 267 FTYGDKPVE+RR Y+T N+HY++ELN Sbjct: 258 FTYGDKPVEVRRSYYVTNNHHYRNELN 284 >ref|ZP_08273491.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF33032.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 180/240 (75%), Positives = 199/240 (82%), Gaps = 6/240 (2%) Query: 27 FSPLYQQIKAFRHXKALITQRLESGEWKPGELIPSEVELGNRFKVSQGTVRKAIDELAAE 86 FSPLYQQIKA LIT L++GEWKPGELIPSEVEL RFKVSQGTVRKAIDEL++E Sbjct: 24 FSPLYQQIKA------LITASLQAGEWKPGELIPSEVELAGRFKVSQGTVRKAIDELSSE 77 Query: 87 NLVVRRQGKGTFVATHHETHAQFRFLRLTADTDVPQRAENKIIEVKRVRAPAEVARQLDM 146 NLVVRRQGKGTFVATHHE AQFRFLRL D V +A+N IIEVKR RAPA+VAR LD+ Sbjct: 78 NLVVRRQGKGTFVATHHEVRAQFRFLRLMPDAGVAHQADNLIIEVKRQRAPADVARLLDI 137 Query: 147 KSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKGLTAERLMEYKGPLYGLFETEFGTRMI 206 K D+VIFIKRV+SF G P ILEE+WLPG IFKGLTAERL+EYKGP+YGLFETEFGTRMI Sbjct: 138 KPADAVIFIKRVQSFEGAPAILEELWLPGTIFKGLTAERLVEYKGPMYGLFETEFGTRMI 197 Query: 207 RAEEQIRAVGADPESAELLGVPPQTPLLSVDRASFTYGDKPVEMRRGLYLTLNYHYQSEL 266 RA E+IRAV AD + L V TPLLSV+R SFTYGDKPVE+RRGLY T ++HYQSEL Sbjct: 198 RATEKIRAVHADHVACGWLQVVTDTPLLSVERVSFTYGDKPVEVRRGLYRTDSHHYQSEL 257