BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0041.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776373.1| citrate lyase beta subunit [Herbaspirillum s... 432 e-119 ref|YP_001353193.1| citrate lyase beta chain [Janthinobacterium ... 412 e-113 ref|YP_004752397.1| citrate lyase subunit beta [Collimonas fungi... 409 e-112 ref|YP_001100062.1| putative lyase [Herminiimonas arsenicoxydans... 402 e-110 ref|ZP_08273489.1| Citrate lyase beta chain [Oxalobacteraceae ba... 387 e-106 >ref|YP_003776373.1| citrate lyase beta subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64465.1| citrate lyase beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/328 (66%), Positives = 243/328 (74%), Gaps = 30/328 (9%) Query: 1 MHPTQVLFPGTRQPVLLPVCDHYAGSEKLMRKSIALQQELGPVFDITLDCEDGASAGNEA 60 MHP+QVLFPG +QPVLLPVCDHYAGSEKLMRKS+ALQQELGP+FDIT DCEDGA+AGNE Sbjct: 1 MHPSQVLFPGAQQPVLLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNET 60 Query: 61 EHAQLVGSLIAGDDNRFGRIGARVHDVTSPFFEQDVATICASAALRLAYLMLPKADGLAD 120 HA+LV +LI G DN RIGAR+HDV+ P FEQDVA +C +AA LAY+MLPK +G+ D Sbjct: 61 AHAELVAALITGPDNVHRRIGARLHDVSHPHFEQDVAILCGAAARELAYVMLPKPEGIDD 120 Query: 121 VQQALAAIARHTSAAGRRMPPLHVLIETHGALEDVRLIAALPQVESLSFGVMDFVSAHYG 180 V +AL +I R AAGR P+ VL+ETHGAL D IAALPQV+SLSFGVMDFVSAHYG Sbjct: 121 VLRALESIQRAARAAGRSDLPVQVLVETHGALADAWKIAALPQVQSLSFGVMDFVSAHYG 180 Query: 181 AIPGAAMRSPGQFTHPLVARXP------------------------------DAARAAQE 210 AIPG+AMRSPGQF HPLV R DA RAAQE Sbjct: 181 AIPGSAMRSPGQFDHPLVRRAKLDISAACHAHGKVPSHNVTTDIKNPAAVADDACRAAQE 240 Query: 211 FGYTRMWSIHPNQIKAIVQTLSPANDEIDAAAQILLSARDVQWGPIQHGGTLHDRASYRY 270 FGYTRMWSIHP+QI+ IVQ +SPA +E D AAQILL A+ VQWGPIQH G LHDRASYRY Sbjct: 241 FGYTRMWSIHPDQIRPIVQAMSPATEEADLAAQILLKAQAVQWGPIQHLGNLHDRASYRY 300 Query: 271 YWSILQRAHAGGAALPAEVAAWFAETGT 298 YWSILQRAHA G LP E A WFA T Sbjct: 301 YWSILQRAHATGVTLPPETAVWFAPGDT 328 >ref|YP_001353193.1| citrate lyase beta chain [Janthinobacterium sp. Marseille] gb|ABR89037.1| citrate lyase beta chain [Janthinobacterium sp. Marseille] Length = 323 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/317 (63%), Positives = 230/317 (72%), Gaps = 30/317 (9%) Query: 1 MHPTQVLFPGTRQPVLLPVCDHYAGSEKLMRKSIALQQELGPVFDITLDCEDGASAGNEA 60 MHP++VLF G PV +P CDHYAGSEKLMRKS+ALQQELGPVFDIT DCEDGA+ GNE Sbjct: 1 MHPSEVLFQGKCPPVSIPACDHYAGSEKLMRKSLALQQELGPVFDITFDCEDGAAHGNEK 60 Query: 61 EHAQLVGSLIAGDDNRFGRIGARVHDVTSPFFEQDVATICASAALRLAYLMLPKADGLAD 120 +HA L+G+L+AG++N+F RIGARVHDVTS FFEQD+ I AA +LAYL++PK D LAD Sbjct: 61 DHAHLLGTLVAGEENQFARIGARVHDVTSEFFEQDIEIILQHAAQKLAYLVVPKVDSLAD 120 Query: 121 VQQALAAIARHTSAAGRRMPPLHVLIETHGALEDVRLIAALPQVESLSFGVMDFVSAHYG 180 A+A + RH GR P+HVLIETHGAL DV IAALPQVE LSFGVMDFVSAHYG Sbjct: 121 TVNAIALVNRHAHKQGREQLPVHVLIETHGALADVFAIAALPQVECLSFGVMDFVSAHYG 180 Query: 181 AIPGAAMRSPGQFTHPLVARXP------------------------------DAARAAQE 210 AIPG AMRSPGQFTHPLVAR DA RAA E Sbjct: 181 AIPGNAMRSPGQFTHPLVARAKLEIAAACHAHGKTPSHNVTTEINDTSVVASDAHRAAAE 240 Query: 211 FGYTRMWSIHPNQIKAIVQTLSPANDEIDAAAQILLSARDVQWGPIQHGGTLHDRASYRY 270 FGYTRMWSIHPNQIK I+++ +P E++ AA+IL A +QWGPIQH G LHDRASYRY Sbjct: 241 FGYTRMWSIHPNQIKPILKSFAPRLSEVNEAAEILAQAHAIQWGPIQHNGKLHDRASYRY 300 Query: 271 YWSILQRAHAGGAALPA 287 YW+ILQRA A G LPA Sbjct: 301 YWTILQRAQASGLTLPA 317 >ref|YP_004752397.1| citrate lyase subunit beta [Collimonas fungivorans Ter331] gb|AEK61574.1| Citrate lyase beta chain [Collimonas fungivorans Ter331] Length = 323 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/316 (67%), Positives = 233/316 (73%), Gaps = 30/316 (9%) Query: 1 MHPTQVLFPGTRQPVLLPVCDHYAGSEKLMRKSIALQQELGPVFDITLDCEDGASAGNEA 60 MHPTQVLF G +QPV LPVCDHYAG+EKLMRKS+ALQQELGPVFDITLDCEDGASAGNEA Sbjct: 1 MHPTQVLFLGKQQPVSLPVCDHYAGAEKLMRKSVALQQELGPVFDITLDCEDGASAGNEA 60 Query: 61 EHAQLVGSLIAGDDNRFGRIGARVHDVTSPFFEQDVATICASAALRLAYLMLPKADGLAD 120 HAQLV ++I G DNRF RIGARVHD S FFEQDV IC AA RLAYLMLPKA+ LA+ Sbjct: 61 AHAQLVAAVIGGADNRFERIGARVHDSGSAFFEQDVEIICKGAARRLAYLMLPKAESLAE 120 Query: 121 VQQALAAIARHTSAAGRRMPPLHVLIETHGALEDVRLIAALPQVESLSFGVMDFVSAHYG 180 V A+A I H+S AGR+ P+HVLIETHGAL DV IAALPQV+SLSFG+MDFVSAHYG Sbjct: 121 VSAAIALIEHHSSQAGRQALPVHVLIETHGALADVFAIAALPQVQSLSFGIMDFVSAHYG 180 Query: 181 AIPGAAMRSPGQFTHPLVARXP------------------------------DAARAAQE 210 AIP AAMRSP QF+HPLV R DA RA E Sbjct: 181 AIPSAAMRSPAQFSHPLVTRAKLEIAAACHAHGKVPSHNVTTDIKDSASVAADAGRAVSE 240 Query: 211 FGYTRMWSIHPNQIKAIVQTLSPANDEIDAAAQILLSARDVQWGPIQHGGTLHDRASYRY 270 FGYTRMWSIHP QI+ I+ +P EI AAAQILL+AR WGPIQH GTLHDRASYRY Sbjct: 241 FGYTRMWSIHPQQIRPILNAFTPPQSEIAAAAQILLAARQADWGPIQHEGTLHDRASYRY 300 Query: 271 YWSILQRAHAGGAALP 286 YWS+LQRA G ALP Sbjct: 301 YWSVLQRAKNNGVALP 316 >ref|YP_001100062.1| putative lyase [Herminiimonas arsenicoxydans] emb|CAL61937.1| putative lyase, CitE-like [Herminiimonas arsenicoxydans] Length = 321 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/316 (62%), Positives = 230/316 (72%), Gaps = 32/316 (10%) Query: 1 MHPTQVLFPGTRQPVLLPVCDHYAGSEKLMRKSIALQQELGPVFDITLDCEDGASAGNEA 60 MHP++VLF GT PV +PVCDHYAGSEKLMRKS+ALQ ELGPVFDIT DCEDGA+ GNE Sbjct: 1 MHPSEVLFQGTLPPVSIPVCDHYAGSEKLMRKSLALQAELGPVFDITFDCEDGAALGNEQ 60 Query: 61 EHAQLVGSLIAGDDNRFGRIGARVHDVTSPFFEQDVATICASAALRLAYLMLPKADGLAD 120 HAQL+G+LIAG++N FGRIGARVHDVTS FFEQD+ I AA RLAYL++PK +AD Sbjct: 61 AHAQLIGALIAGEENLFGRIGARVHDVTSEFFEQDIKIILQHAAERLAYLVMPKVGSIAD 120 Query: 121 VQQALAAIARHTSAAGRRMPPLHVLIETHGALEDVRLIAALPQVESLSFGVMDFVSAHYG 180 V+ A++ I RH A GR P+HVLIETHGAL+D IAALPQVE LSFG+MDFVS+HYG Sbjct: 121 VENAISLINRH--ANGRANLPVHVLIETHGALKDAYAIAALPQVECLSFGIMDFVSSHYG 178 Query: 181 AIPGAAMRSPGQFTHPLVARXP------------------------------DAARAAQE 210 AIPG+AMRSPGQFTHPL+ R DA RAA E Sbjct: 179 AIPGSAMRSPGQFTHPLLTRAKLEIAAACHAHGKTPSHNVTTEIHDTSVVASDAHRAASE 238 Query: 211 FGYTRMWSIHPNQIKAIVQTLSPANDEIDAAAQILLSARDVQWGPIQHGGTLHDRASYRY 270 F YTRMWSIHP QIK I+++ +P E++ AA IL A+ VQWGPIQH G LHD+ASYRY Sbjct: 239 FAYTRMWSIHPGQIKPILKSFAPRLSEVNEAATILSQAQAVQWGPIQHNGKLHDKASYRY 298 Query: 271 YWSILQRAHAGGAALP 286 YW+ILQRA A G LP Sbjct: 299 YWTILQRAQASGLPLP 314 >ref|ZP_08273489.1| Citrate lyase beta chain [Oxalobacteraceae bacterium IMCC9480] gb|EGF33030.1| Citrate lyase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 325 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 196/320 (61%), Positives = 226/320 (70%), Gaps = 30/320 (9%) Query: 1 MHPTQVLFPGTRQPVLLPVCDHYAGSEKLMRKSIALQQELGPVFDITLDCEDGASAGNEA 60 MHP++VLF G R PV LPVCDHYAGS+KLMRKSIALQQELGPVFDIT DCEDGA+AG+E Sbjct: 1 MHPSEVLFQGKRPPVSLPVCDHYAGSDKLMRKSIALQQELGPVFDITFDCEDGAAAGDEQ 60 Query: 61 EHAQLVGSLIAGDDNRFGRIGARVHDVTSPFFEQDVATICASAALRLAYLMLPKADGLAD 120 HA+ V +LIA D N+FGRIGARVHDV S FF QDVA IC AA +LAYL++PK D +A+ Sbjct: 61 AHAERVAALIASDANQFGRIGARVHDVHSEFFAQDVAIICHGAARQLAYLVIPKVDSVAE 120 Query: 121 VQQALAAIARHTSAAGRRMPPLHVLIETHGALEDVRLIAALPQVESLSFGVMDFVSAHYG 180 V A+ I H AGR P+HVLIETHGAL DV IAAL QV+ LSFG+MDFVSAHYG Sbjct: 121 VIAAIDLINHHARHAGREALPIHVLIETHGALADVFAIAALDQVQCLSFGIMDFVSAHYG 180 Query: 181 AIPGAAMRSPGQFTHPLVARXP------------------------------DAARAAQE 210 AIP +AMR+PGQFTHPLV R DA+RA + Sbjct: 181 AIPASAMRTPGQFTHPLVMRAKLAISAACHAHGKVPSHNVTTDIKDSGIAANDASRAGSD 240 Query: 211 FGYTRMWSIHPNQIKAIVQTLSPANDEIDAAAQILLSARDVQWGPIQHGGTLHDRASYRY 270 GYTRMWSIHP+QIK IV++ P + E+ AAQIL A+ WGPI+H G LHDRASYRY Sbjct: 241 CGYTRMWSIHPDQIKPIVKSFMPRSSEVAEAAQILTDAQAASWGPIKHNGRLHDRASYRY 300 Query: 271 YWSILQRAHAGGAALPAEVA 290 YW+ILQRA + G LP VA Sbjct: 301 YWTILQRARSSGLPLPDSVA 320