BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0040.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776374.1| hypothetical protein Hsero_2978 [Herbaspiril... 193 7e-48 ref|YP_004752396.1| hypothetical protein CFU_1741 [Collimonas fu... 152 3e-35 ref|YP_001353192.1| hypothetical protein mma_1502 [Janthinobacte... 142 1e-32 ref|ZP_08273488.1| putative signal peptide protein [Oxalobactera... 138 2e-31 ref|YP_001100063.1| putative signal peptide protein [Herminiimon... 135 3e-30 >ref|YP_003776374.1| hypothetical protein Hsero_2978 [Herbaspirillum seropedicae SmR1] gb|ADJ64466.1| exported signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 182 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 109/162 (67%), Positives = 125/162 (77%), Gaps = 3/162 (1%) Query: 1 MKKYLTALTLASALCAI-GMPSAFAETGAPAATATKKQPAKKKAAHPKAAAAAAKPAEKM 59 MKK+LT + L AL A G+ +A AET A K AAAAAA PA KM Sbjct: 1 MKKHLTLIALLGALFATAGITAAHAETDTKPAAKKKVVKKAPAKK--AAAAAAAAPAAKM 58 Query: 60 ALSSDADDDENEPEIGGTKSADFHCEMGNKLTIYKNDDDDKHIAIRWNKRINRLTRVTTT 119 SSDA+DD++EPE+GGT SADF CEMG+KLTI+KN+ DDKHIAIRW+KRI+RLTRV TT Sbjct: 59 PFSSDAEDDDSEPELGGTLSADFQCEMGHKLTIWKNETDDKHIAIRWDKRIHRLTRVETT 118 Query: 120 TGANRFENRKVGLVWIGIPAKGILLDSKKGQQLANECKNAES 161 TGANRFENRK+GLVWIGIPAKG+LLDSKKGQQLANECKNA+ Sbjct: 119 TGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNADQ 160 >ref|YP_004752396.1| hypothetical protein CFU_1741 [Collimonas fungivorans Ter331] gb|AEK61573.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 199 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/172 (48%), Positives = 103/172 (59%), Gaps = 17/172 (9%) Query: 1 MKKYLTALTLASALCAIGMPSAFAETGAPAATATKKQPAKKKAAHPKAAAAAAKPAEKMA 60 M+K L+ L L A A+ P A+T A + KAA + Sbjct: 39 MRKSLSILVLLCAGLAVAAPQVQAQTSAKKTVKKSAKKPAAKAAPAEV------------ 86 Query: 61 LSSDADDDENEPEIGGTKSADFHCEMGNKLTIYKNDDDDKHIAIRWNKRINRLTRVTTTT 120 D +DE P++ + S D+ CE+GN LTI+ N +DDKHIA+RW K ++RL+RV TTT Sbjct: 87 ---DDGEDEGTPDVKTSVSIDYKCELGNSLTIFTNAEDDKHIALRWGKALHRLSRVPTTT 143 Query: 121 GANRFENRKVGLVWIGIPAKGILLDSKKGQQLANECKNAESAT--AEAPAAP 170 GANRFENRK GL+WIGIPAKGILLDSK G QLANECK+AE A AP P Sbjct: 144 GANRFENRKYGLLWIGIPAKGILLDSKTGHQLANECKSAEQELLPAAAPVDP 195 >ref|YP_001353192.1| hypothetical protein mma_1502 [Janthinobacterium sp. Marseille] gb|ABR88993.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 165 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/168 (49%), Positives = 105/168 (62%), Gaps = 8/168 (4%) Query: 1 MKKYLTALTLASALCAIGMPSAFAETGAPAAT-ATKKQPAKKKAAHPKAAAAAAKPAEKM 59 MKK L A L IGM SA A A + + K+PA K A AAAA Sbjct: 1 MKKLLCAFLL------IGMSSAIAPAFAQSTSKEAAKKPATKTVKKAPAKAAAAATPAAA 54 Query: 60 ALSSDAD-DDENEPEIGGTKSADFHCEMGNKLTIYKNDDDDKHIAIRWNKRINRLTRVTT 118 A + D D +D E I G+ ++CE+GNK+T Y N DDK++AIRW +++RL R+ T Sbjct: 55 AAAGDDDQEDLGEANIEGSTVTHYNCELGNKITTYNNVGDDKYMAIRWQNKVHRLGRIGT 114 Query: 119 TTGANRFENRKVGLVWIGIPAKGILLDSKKGQQLANECKNAESATAEA 166 +TGANRFENRK GLVWI IP+K +LLDSKKGQQLANEC+N + A+A Sbjct: 115 STGANRFENRKAGLVWINIPSKAMLLDSKKGQQLANECRNPDQVKAQA 162 >ref|ZP_08273488.1| putative signal peptide protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33029.1| putative signal peptide protein [Oxalobacteraceae bacterium IMCC9480] Length = 171 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 16/165 (9%) Query: 1 MKKYLTALT---LASALCAIGMPSAFA--ETGAPAATATKKQPAKKKAAHPKAAAAAAKP 55 M K +AL L S L A+ P+ FA ETGAPA K+ KKK+ AA AA Sbjct: 1 MTKLFSALLTGLLVSGL-ALTAPAVFAATETGAPAV----KKVIKKKSPAKHAAPAAPAA 55 Query: 56 AEKMALSSDADDDENEPEIGGT--KSADFHCEMGNKLTIYKNDDDDKHIAIRWNKRINRL 113 E A DDD+ I + + ++ CE+GN LTI++ND DD +IA+RW+K + R+ Sbjct: 56 YELAA----PDDDDTGAPIDASIAPATEYKCELGNTLTIFRNDGDDNYIALRWHKVLTRM 111 Query: 114 TRVTTTTGANRFENRKVGLVWIGIPAKGILLDSKKGQQLANECKN 158 RV TTTGA+RFEN++ GLVWIGIPAKG+LLDS+KGQQLANECK+ Sbjct: 112 KRVATTTGAHRFENKRSGLVWIGIPAKGLLLDSRKGQQLANECKD 156 >ref|YP_001100063.1| putative signal peptide protein [Herminiimonas arsenicoxydans] emb|CAL61938.1| conserved hypothetical protein, putative exported protein [Herminiimonas arsenicoxydans] Length = 170 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 78/103 (75%) Query: 64 DADDDENEPEIGGTKSADFHCEMGNKLTIYKNDDDDKHIAIRWNKRINRLTRVTTTTGAN 123 D D+D E I G+ +F+CE+GNK+T Y N DDKH+AIRW +++R+ R+ T+TGAN Sbjct: 63 DDDEDLGEANIEGSIVNNFNCELGNKITTYYNASDDKHLAIRWKDKVHRMRRIGTSTGAN 122 Query: 124 RFENRKVGLVWIGIPAKGILLDSKKGQQLANECKNAESATAEA 166 RFENRKVGLVWI IP+K +LLDS KG QLANEC++ E A A A Sbjct: 123 RFENRKVGLVWIHIPSKAMLLDSGKGLQLANECRDPEQAKAFA 165