BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0020.p (565 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776395.1| poly(3-hydroxyalkanoate) synthetase [Herbasp... 781 0.0 ref|YP_004752430.1| polyhydroxyalkanoic acid synthase [Collimona... 716 0.0 ref|ZP_08273177.1| Polyhydroxyalkanoic acid synthase [Oxalobacte... 663 0.0 ref|YP_001353086.1| poly-beta-hydroxybutyrate polymerase [Janthi... 652 0.0 ref|YP_001100197.1| Poly-beta-hydroxybutyrate polymerase [Hermin... 644 0.0 >ref|YP_003776395.1| poly(3-hydroxyalkanoate) synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64487.1| poly(3-hydroxyalkanoate) synthetase protein [Herbaspirillum seropedicae SmR1] Length = 588 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/464 (79%), Positives = 416/464 (89%) Query: 6 KQLGDLGATLDPADVVRLQQDYADQFASLWQTAVNSQIPAVTDRRMSAPAWQSNPFFAFH 65 KQL D GAT+DPA++VRLQQDY QF +LWQ+ + ++ PA+TDRR+SAPAWQ +P+FAF Sbjct: 50 KQLADNGATIDPAELVRLQQDYTQQFGALWQSMLAAKTPAITDRRLSAPAWQEHPYFAFQ 109 Query: 66 AAAYQLNARFLTSMVDAVQSTDKVKQKLRFAVQQMIDALSPANFLATNPEAQQKIIDTHG 125 AAAYQLN+RFL ++ DAVQ ++KV+ KLRFAVQQMIDA+SPANFLATNP AQQKI++T G Sbjct: 110 AAAYQLNSRFLLALADAVQGSEKVRHKLRFAVQQMIDAMSPANFLATNPVAQQKILETRG 169 Query: 126 ESLTRGIAQLFADLQKGRVSQTDETAFEVGRDVATTAGSVVFENELFQLIQYAPLTKTVH 185 ESLT+GIAQL ADLQKG VSQTDETAFEVGRDV + GSV+FENELFQLIQY PLTKTVH Sbjct: 170 ESLTKGIAQLLADLQKGHVSQTDETAFEVGRDVGASEGSVIFENELFQLIQYKPLTKTVH 229 Query: 186 ARPLLIVPPCINKFYILDLQPQNSLVRYAVEQGNTVFLISWRNADASMETATWDQYVDDA 245 PLLIVPPCINKFYILDLQP NSLVRY VEQG+TVFLISWRNADA++ETATWDQYVDDA Sbjct: 230 EVPLLIVPPCINKFYILDLQPHNSLVRYTVEQGHTVFLISWRNADAAVETATWDQYVDDA 289 Query: 246 VVNAIHVAQEISGQDKINALGFCVGGTILSCALAVLAARGEEPVASLTLLTAFLNFLDTG 305 VV +IH+ QEIS Q +INALGFCVGGTILSCALA+LAARGE+PVASLTLLT FL+F DTG Sbjct: 290 VVRSIHIVQEISKQPQINALGFCVGGTILSCALALLAARGEDPVASLTLLTTFLDFSDTG 349 Query: 306 AIDVYIDDVQIGMREQMIGKSGLMSGRDFASAFSSLRPNDLLWNYVESNYLKGETPQAFD 365 AIDVYID++Q+ +REQMIG+ GLM+GRDFASAFSSLRPNDLLWNYVESNYLKGE P AFD Sbjct: 350 AIDVYIDEMQLALREQMIGQRGLMAGRDFASAFSSLRPNDLLWNYVESNYLKGEKPSAFD 409 Query: 366 LLYWNADSTNLPGPMFCYYLRHMYLENALKEPGKLTIAGEKIDLYKLNMPAFIYASREDH 425 LLYWNADSTNLPGPMFCYYLRHMYLENALKEPG+LT+ GEKIDL K+N PAFIYASR+DH Sbjct: 410 LLYWNADSTNLPGPMFCYYLRHMYLENALKEPGRLTVGGEKIDLRKINAPAFIYASRDDH 469 Query: 426 IVPWASAYASTAILNAKKPANNRFVLGASGHIAGVINPPDXNRR 469 IVPW SAYAS ++N K +NNRFVLGASGHIAGVINP N+R Sbjct: 470 IVPWKSAYASLGLINTAKRSNNRFVLGASGHIAGVINPASKNKR 513 >ref|YP_004752430.1| polyhydroxyalkanoic acid synthase [Collimonas fungivorans Ter331] gb|AEK61607.1| Polyhydroxyalkanoic acid synthase [Collimonas fungivorans Ter331] Length = 591 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/468 (71%), Positives = 394/468 (84%), Gaps = 1/468 (0%) Query: 2 QSIQKQLGDLGATLDPADVVRLQQDYADQFASLWQTAVNSQIPAVTDRRMSAPAWQSNPF 61 QS G+LG +LDPA + +LQ +Y Q ++LW+ + ++IPA+ DRR SA AW NP Sbjct: 56 QSGAAGFGELGISLDPAVLEKLQAEYTQQLSALWKDMLAARIPAIADRRFSAAAWHGNPV 115 Query: 62 FAFHAAAYQLNARFLTSMVDAVQSTDKVKQKLRFAVQQMIDALSPANFLATNPEAQQKII 121 +AF+AAAY LNA FLT+MV+A+++ K+K+K+ F VQQMIDA++P+NFLATNP AQQKI+ Sbjct: 116 YAFNAAAYLLNAHFLTAMVEALEAPPKIKRKIGFTVQQMIDAMAPSNFLATNPAAQQKIV 175 Query: 122 DTHGESLTRGIAQLFADLQKGRVSQTDETAFEVGRDVATTAGSVVFENELFQLIQYAPLT 181 +T+GESLT+GIAQ+ AD+ KGRVSQTDE+AFEVG+DVATT G+VVFENELFQLIQY PLT Sbjct: 176 ETNGESLTKGIAQMIADMHKGRVSQTDESAFEVGKDVATTEGAVVFENELFQLIQYTPLT 235 Query: 182 KTVHARPLLIVPPCINKFYILDLQPQNSLVRYAVEQGNTVFLISWRNADASMETATWDQY 241 V+ RPLLIVPPCINKFYILDLQPQNSLVRYAVEQG++VFL+SWRNAD S+ ATWDQY Sbjct: 236 AKVYQRPLLIVPPCINKFYILDLQPQNSLVRYAVEQGHSVFLVSWRNADESLAQATWDQY 295 Query: 242 VDDAVVNAIHVAQEISGQDKINALGFCVGGTILSCALAVLAARGEEPVASLTLLTAFLNF 301 V D + AI Q+ISGQDKIN LGFCVGGTILS ALA LAA P+ASLTLLTAFL+F Sbjct: 296 VVDGAIRAIQAVQDISGQDKINTLGFCVGGTILSTALAKLAAEKNNPIASLTLLTAFLDF 355 Query: 302 LDTGAIDVYIDDVQIGMREQMIGKSGLMSGRDFASAFSSLRPNDLLWNYVESNYLKGETP 361 DTG +DVYIDD+QI MREQ IG+ GLM GR+F SAFSSLRPNDLLWNYVESNYLKGE P Sbjct: 356 SDTGILDVYIDDMQIRMREQAIGQGGLMPGREFGSAFSSLRPNDLLWNYVESNYLKGEQP 415 Query: 362 QAFDLLYWNADSTNLPGPMFCYYLRHMYLENALKEPGKLTIAGEKIDLYKLNMPAFIYAS 421 FDLLYWNADSTNLPGPMFCYYLRHMYL+N+LK+ +LT+ G+KIDL K++ PAFIYAS Sbjct: 416 TPFDLLYWNADSTNLPGPMFCYYLRHMYLDNSLKD-ARLTVGGQKIDLGKIDAPAFIYAS 474 Query: 422 REDHIVPWASAYASTAILNAKKPANNRFVLGASGHIAGVINPPDXNRR 469 REDHIVPWASAYAS ++LN KKP NRFVLGASGHIAGVINPP +R Sbjct: 475 REDHIVPWASAYASVSLLNPKKPKQNRFVLGASGHIAGVINPPAKKKR 522 >ref|ZP_08273177.1| Polyhydroxyalkanoic acid synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33367.1| Polyhydroxyalkanoic acid synthase [Oxalobacteraceae bacterium IMCC9480] Length = 559 Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/457 (66%), Positives = 375/457 (82%) Query: 13 ATLDPADVVRLQQDYADQFASLWQTAVNSQIPAVTDRRMSAPAWQSNPFFAFHAAAYQLN 72 A DPA + LQ Y + SLW + +++ A+ D+R APAWQ+NP +F+A+AY LN Sbjct: 35 AEFDPAVMASLQAKYMQELGSLWTSTMSAPAAAIADKRFGAPAWQANPMGSFNASAYLLN 94 Query: 73 ARFLTSMVDAVQSTDKVKQKLRFAVQQMIDALSPANFLATNPEAQQKIIDTHGESLTRGI 132 A+FL +M DAV++T KVK+K+RF VQQMIDA+SPANFL TNPEAQQ +++T GESL+RG+ Sbjct: 95 AKFLNAMTDAVKATPKVKEKIRFNVQQMIDAMSPANFLVTNPEAQQLLLETKGESLSRGL 154 Query: 133 AQLFADLQKGRVSQTDETAFEVGRDVATTAGSVVFENELFQLIQYAPLTKTVHARPLLIV 192 QL AD++KGR+SQTDETAFEVG++VATT G+VVFENELFQL+QY PLTKTV RPLLI+ Sbjct: 155 TQLLADMRKGRISQTDETAFEVGKNVATTEGAVVFENELFQLLQYKPLTKTVFERPLLIM 214 Query: 193 PPCINKFYILDLQPQNSLVRYAVEQGNTVFLISWRNADASMETATWDQYVDDAVVNAIHV 252 PPCINK+YILDLQP+NSLVRYAVEQG+TVFLISWRN DAS+ TWD Y++ AI V Sbjct: 215 PPCINKYYILDLQPENSLVRYAVEQGHTVFLISWRNPDASLAHLTWDDYIELGAFEAIAV 274 Query: 253 AQEISGQDKINALGFCVGGTILSCALAVLAARGEEPVASLTLLTAFLNFLDTGAIDVYID 312 Q+ISGQ++INALGFCVGGTILS ALA+L ARGE+PV+SLTLLTAFL+F DTG IDV++D Sbjct: 275 TQQISGQEQINALGFCVGGTILSTALALLFARGEKPVSSLTLLTAFLDFTDTGIIDVFVD 334 Query: 313 DVQIGMREQMIGKSGLMSGRDFASAFSSLRPNDLLWNYVESNYLKGETPQAFDLLYWNAD 372 + + REQ IG+ GLM G++FA FSSLR NDL+W+YV+SNYLKGE P AFDLLYWN+D Sbjct: 335 EEAVVKREQAIGQGGLMEGKEFAQTFSSLRSNDLVWSYVKSNYLKGEAPPAFDLLYWNSD 394 Query: 373 STNLPGPMFCYYLRHMYLENALKEPGKLTIAGEKIDLYKLNMPAFIYASREDHIVPWASA 432 STNLPGPMFC+YLR+ YLE+ LK PGK+++ GE +D ++ P F+YASREDHIVPW SA Sbjct: 395 STNLPGPMFCWYLRNTYLEDGLKHPGKVSVLGEPVDFGQIAAPTFLYASREDHIVPWTSA 454 Query: 433 YASTAILNAKKPANNRFVLGASGHIAGVINPPDXNRR 469 YAS A+LN K P N+FV+GASGHIAGVIN P N+R Sbjct: 455 YASMALLNPKHPKLNQFVVGASGHIAGVINAPAKNKR 491 >ref|YP_001353086.1| poly-beta-hydroxybutyrate polymerase [Janthinobacterium sp. Marseille] gb|ABR89461.1| poly-beta-hydroxybutyrate polymerase [Janthinobacterium sp. Marseille] Length = 562 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/459 (65%), Positives = 370/459 (80%) Query: 12 GATLDPADVVRLQQDYADQFASLWQTAVNSQIPAVTDRRMSAPAWQSNPFFAFHAAAYQL 71 G +DPA +LQ DYA QF +LWQ +++Q+P V D+R + PAWQS+ AF+AAAY L Sbjct: 35 GMGIDPAVATQLQNDYAQQFMTLWQQMLSAQVPPVADKRFADPAWQSSTMHAFNAAAYLL 94 Query: 72 NARFLTSMVDAVQSTDKVKQKLRFAVQQMIDALSPANFLATNPEAQQKIIDTHGESLTRG 131 NA+FL +M DAVQ K KQK+RFA++QM++A+SPANFL +NPEAQQK+I+T G SLT G Sbjct: 95 NAKFLAAMADAVQVPPKAKQKIRFAIEQMVNAMSPANFLFSNPEAQQKLIETKGASLTNG 154 Query: 132 IAQLFADLQKGRVSQTDETAFEVGRDVATTAGSVVFENELFQLIQYAPLTKTVHARPLLI 191 + LF D+QKGR+SQ+DETAFEVGR+VA T G+VVFENELFQL+QY PLT TV+ RPLL+ Sbjct: 155 LKHLFEDMQKGRISQSDETAFEVGRNVAITEGAVVFENELFQLLQYKPLTPTVYERPLLL 214 Query: 192 VPPCINKFYILDLQPQNSLVRYAVEQGNTVFLISWRNADASMETATWDQYVDDAVVNAIH 251 VPPCINK+YILDLQ NS VRYAVEQG+TVFLISWRNADAS+ ATW+ Y++D V+ A+H Sbjct: 215 VPPCINKYYILDLQAHNSFVRYAVEQGHTVFLISWRNADASIAHATWNDYIEDGVLQAMH 274 Query: 252 VAQEISGQDKINALGFCVGGTILSCALAVLAARGEEPVASLTLLTAFLNFLDTGAIDVYI 311 VA+ I+ Q+KIN LGFCVGGT+L+ ALA+ ARGEEP ASLTLLT FL+F DTG +DVYI Sbjct: 275 VAKAITRQEKINVLGFCVGGTMLTNALALACARGEEPAASLTLLTTFLDFSDTGILDVYI 334 Query: 312 DDVQIGMREQMIGKSGLMSGRDFASAFSSLRPNDLLWNYVESNYLKGETPQAFDLLYWNA 371 D+ +I EQ IG GLM G DF +AF+SLR N+L+WNYV SNYLKGE P FD+LYWNA Sbjct: 335 DEGKIKEIEQEIGSGGLMKGLDFNAAFASLRSNELIWNYVASNYLKGENPAPFDMLYWNA 394 Query: 372 DSTNLPGPMFCYYLRHMYLENALKEPGKLTIAGEKIDLYKLNMPAFIYASREDHIVPWAS 431 DSTNLPGPM+C+Y+R+ YLEN LK+ GK + + IDL +++ P+FIY SR+DHIVPW S Sbjct: 395 DSTNLPGPMYCWYVRNTYLENNLKQFGKFMLGDKSIDLRQIDAPSFIYGSRDDHIVPWTS 454 Query: 432 AYASTAILNAKKPANNRFVLGASGHIAGVINPPDXNRRK 470 AY S ILN KKP NRFVLGA+GHIAGVINPP +RR+ Sbjct: 455 AYESVNILNRKKPQQNRFVLGAAGHIAGVINPPGKSRRQ 493 >ref|YP_001100197.1| Poly-beta-hydroxybutyrate polymerase [Herminiimonas arsenicoxydans] emb|CAL62073.1| Poly-beta-hydroxybutyrate polymerase (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) [Herminiimonas arsenicoxydans] Length = 537 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/455 (66%), Positives = 372/455 (81%) Query: 15 LDPADVVRLQQDYADQFASLWQTAVNSQIPAVTDRRMSAPAWQSNPFFAFHAAAYQLNAR 74 +DPA LQ+DYA +F +LWQ + +Q+P + D+R SA AWQS+ AF+A+ Y LNA+ Sbjct: 14 IDPAVAAELQRDYAQKFLTLWQQMLTAQVPPLADKRFSAAAWQSSTLHAFNASVYLLNAQ 73 Query: 75 FLTSMVDAVQSTDKVKQKLRFAVQQMIDALSPANFLATNPEAQQKIIDTHGESLTRGIAQ 134 FL +M DA+Q T KVKQK+RF V+QM++A+SPANFL +NPEAQQKI++T+G SLT G+ Sbjct: 74 FLAAMADAMQVTPKVKQKIRFGVEQMVNAMSPANFLFSNPEAQQKIVETNGASLTNGLKH 133 Query: 135 LFADLQKGRVSQTDETAFEVGRDVATTAGSVVFENELFQLIQYAPLTKTVHARPLLIVPP 194 LF D+QKGR+SQ+DE+AFEVGR+VA T G+V+FEN+LFQL+QY LT TV+ RPLL+VPP Sbjct: 134 LFEDMQKGRISQSDESAFEVGRNVAITEGAVIFENDLFQLLQYKALTPTVYERPLLLVPP 193 Query: 195 CINKFYILDLQPQNSLVRYAVEQGNTVFLISWRNADASMETATWDQYVDDAVVNAIHVAQ 254 CINK+YILDLQP NS VRYAVEQG+TVFLISWRNADAS+ ATWD YV+ V+ AI VAQ Sbjct: 194 CINKYYILDLQPHNSFVRYAVEQGHTVFLISWRNADASIAHATWDDYVESGVLQAISVAQ 253 Query: 255 EISGQDKINALGFCVGGTILSCALAVLAARGEEPVASLTLLTAFLNFLDTGAIDVYIDDV 314 IS Q+KIN LGFCVGGT+L+ ALA+ ARGE+P ASLTLLT FL+F DTG +DVYID+ Sbjct: 254 AISVQEKINVLGFCVGGTMLANALALACARGEKPAASLTLLTTFLDFSDTGILDVYIDEA 313 Query: 315 QIGMREQMIGKSGLMSGRDFASAFSSLRPNDLLWNYVESNYLKGETPQAFDLLYWNADST 374 +I E++IG GLM G DF +AF+SLR N+L+WNYV SNYLKGE P FD+LYWNADST Sbjct: 314 KIKETEELIGHGGLMKGLDFNAAFASLRSNELIWNYVTSNYLKGENPVPFDMLYWNADST 373 Query: 375 NLPGPMFCYYLRHMYLENALKEPGKLTIAGEKIDLYKLNMPAFIYASREDHIVPWASAYA 434 NLPGPM+C+Y+R+ YLEN LK+ GK +AG+KID K++ P+FIY SR+DHIVPW SAYA Sbjct: 374 NLPGPMYCWYVRNTYLENNLKQLGKFKLAGKKIDFGKIDAPSFIYGSRDDHIVPWTSAYA 433 Query: 435 STAILNAKKPANNRFVLGASGHIAGVINPPDXNRR 469 STAILN KKP NRFVLGA+GHIAGVINPP ++R Sbjct: 434 STAILNRKKPQQNRFVLGAAGHIAGVINPPGKSKR 468