BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0007.p         (176 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776407.1| hypothetical protein Hsero_3011 [Herbaspiril...   210   8e-53
ref|YP_004752239.1| hypothetical protein CFU_1584 [Collimonas fu...   183   1e-44
ref|YP_001353074.1| hypothetical protein mma_1384 [Janthinobacte...   175   2e-42
ref|YP_001100210.1| hypothetical protein HEAR1936 [Herminiimonas...   174   6e-42
emb|CAL62086.2| Conserved hypothetical protein, putative PIN dom...   173   7e-42

>ref|YP_003776407.1| hypothetical protein Hsero_3011 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64499.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 171

 Score =  210 bits (534), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 126/166 (75%), Gaps = 3/166 (1%)

Query: 3   ISIITSPDGATPATAVATAAAAITPRRIVRIVLDTNVCLDLFVFRDPRWSLLLQAMRERR 62
           +SI+ +P    P +   TAAA   P    R+VLDTNVCLDLFVFRDPRW+ LLQA+ +  
Sbjct: 1   MSILATPSVPAPLSLPPTAAA---PPGRQRVVLDTNVCLDLFVFRDPRWAALLQALEDGS 57

Query: 63  VEAVTREDCRMEWLVVLNYPHLPLKEEDKPAIRAEFDSLITCLPNAAVNTFGLPVCTDPD 122
           VEA TREDCR EWL VL YPHLP+  E+KPAI A+FD L+ CLP A VNTFGLP+CTD D
Sbjct: 58  VEAYTREDCRSEWLAVLEYPHLPVTAENKPAICADFDRLLHCLPLAEVNTFGLPLCTDRD 117

Query: 123 DQKFLELALQSEAGVLITKDKALLKLAKKTARKNMFAIMTPQGWHA 168
           DQKFLELALQ  A VL++KDKA+LKLAK+T ++ +FAI+ PQ W A
Sbjct: 118 DQKFLELALQCRAHVLVSKDKAVLKLAKRTLKRGLFAIVPPQHWRA 163


>ref|YP_004752239.1| hypothetical protein CFU_1584 [Collimonas fungivorans Ter331]
 gb|AEK61416.1| hypothetical protein CFU_1584 [Collimonas fungivorans Ter331]
          Length = 168

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 111/143 (77%), Gaps = 3/143 (2%)

Query: 32  RIVLDTNVCLDLFVFRDPRWSLLLQAMRERRVEAVTREDCRMEWLVVLNYPHLPLKEEDK 91
           RIV+DTNVCLDLFVFRDPRW+ L+ A++   VEAVTR DCR EW +VL+Y HLP+ ++ +
Sbjct: 26  RIVIDTNVCLDLFVFRDPRWASLMSALQSGAVEAVTRADCRQEWQMVLHYSHLPVTDDTR 85

Query: 92  PAIRAEFDSLITCLPNAAVN---TFGLPVCTDPDDQKFLELALQSEAGVLITKDKALLKL 148
           PA  AEFD+LITCL   A++      LP+CTD DDQKFLELAL + A +LITKDKALLKL
Sbjct: 86  PACNAEFDALITCLEAEALSPRPGIRLPICTDRDDQKFLELALGANATILITKDKALLKL 145

Query: 149 AKKTARKNMFAIMTPQGWHAAMT 171
           A+KTA+  +FAI+ PQ W+ A T
Sbjct: 146 ARKTAKAGLFAIVAPQAWNPAGT 168


>ref|YP_001353074.1| hypothetical protein mma_1384 [Janthinobacterium sp. Marseille]
 gb|ABR90531.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 155

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 106/144 (73%), Gaps = 2/144 (1%)

Query: 32  RIVLDTNVCLDLFVFRDPRWSLLLQAMRERRVEAVTREDCRMEWLVVLNYPHLPLKEEDK 91
           RIVLDTNVCLDLFVFRDPRW+ LL AM+  +VEA+TR+DCR EW +VL YPHL L E  +
Sbjct: 9   RIVLDTNVCLDLFVFRDPRWAQLLAAMQNGQVEALTRDDCRKEWSIVLAYPHLKLDEAAR 68

Query: 92  PAIRAEFDSLITCLPNAAVNTFG--LPVCTDPDDQKFLELALQSEAGVLITKDKALLKLA 149
             + AEFD+LI C P  A +     LPVC D DDQKFLEL+   +A VLITKDKALLKLA
Sbjct: 69  VQVSAEFDALIRCHPIPATDEAAPRLPVCKDKDDQKFLELSRDVKADVLITKDKALLKLA 128

Query: 150 KKTARKNMFAIMTPQGWHAAMTEE 173
           +KT R  +F IMTP+ W  ++ ++
Sbjct: 129 RKTRRDGLFEIMTPEAWTTSLAQQ 152


>ref|YP_001100210.1| hypothetical protein HEAR1936 [Herminiimonas arsenicoxydans]
          Length = 156

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/144 (58%), Positives = 103/144 (71%), Gaps = 2/144 (1%)

Query: 25  ITPRRIVRIVLDTNVCLDLFVFRDPRWSLLLQAMRERRVEAVTREDCRMEWLVVLNYPHL 84
           +  + + RIVLDTNVCLDLFVFRDPRW+ L  A+++  VEA+TR+DCRMEW +VL YPHL
Sbjct: 1   MNSKLVTRIVLDTNVCLDLFVFRDPRWTRLHAALKDGSVEAITRDDCRMEWSIVLRYPHL 60

Query: 85  PLKEEDKPAIRAEFDSLITC--LPNAAVNTFGLPVCTDPDDQKFLELALQSEAGVLITKD 142
            L +  +  I  EFD+LI C  +P        LP+C D DDQKFLEL+    A VLITKD
Sbjct: 61  KLDDTARLQIAEEFDALIRCTAMPGLDTEAAKLPICKDKDDQKFLELSRDINADVLITKD 120

Query: 143 KALLKLAKKTARKNMFAIMTPQGW 166
           KALLKLA+KT R  +FAIMTP+ W
Sbjct: 121 KALLKLARKTRRDGLFAIMTPEAW 144


>emb|CAL62086.2| Conserved hypothetical protein, putative PIN domain [Herminiimonas
           arsenicoxydans]
          Length = 161

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 2/139 (1%)

Query: 30  IVRIVLDTNVCLDLFVFRDPRWSLLLQAMRERRVEAVTREDCRMEWLVVLNYPHLPLKEE 89
           + RIVLDTNVCLDLFVFRDPRW+ L  A+++  VEA+TR+DCRMEW +VL YPHL L + 
Sbjct: 11  VTRIVLDTNVCLDLFVFRDPRWTRLHAALKDGSVEAITRDDCRMEWSIVLRYPHLKLDDT 70

Query: 90  DKPAIRAEFDSLITC--LPNAAVNTFGLPVCTDPDDQKFLELALQSEAGVLITKDKALLK 147
            +  I  EFD+LI C  +P        LP+C D DDQKFLEL+    A VLITKDKALLK
Sbjct: 71  ARLQIAEEFDALIRCTAMPGLDTEAAKLPICKDKDDQKFLELSRDINADVLITKDKALLK 130

Query: 148 LAKKTARKNMFAIMTPQGW 166
           LA+KT R  +FAIMTP+ W
Sbjct: 131 LARKTRRDGLFAIMTPEAW 149