BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0062.p (306 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004750876.1| putative amino-acid-binding periplasmic, ABC... 305 7e-81 ref|YP_004753289.1| putative amino-acid-binding periplasmic (pbp... 278 6e-73 ref|YP_003746299.1| glutamate/aspartate ABC transport protein hi... 267 2e-69 emb|CBJ38124.1| glutamate/aspartate transport protein (ABC super... 265 5e-69 gb|AEG69695.1| glutamate/aspartate ABC transport protein high af... 265 5e-69 >ref|YP_004750876.1| putative amino-acid-binding periplasmic, ABC transporter protein [Collimonas fungivorans Ter331] gb|AEK60053.1| putative amino-acid-binding periplasmic, ABC transporter protein [Collimonas fungivorans Ter331] Length = 299 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 134/277 (48%), Positives = 200/277 (72%), Gaps = 1/277 (0%) Query: 28 MQARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRNIAEGLRKELKLP 87 + A A TL KIR + + AY T PF++ D+K + GY+I+LC+ IA+ +++ELKLP Sbjct: 23 LAATAGDTLGKIRDSQTITFAYRQ-TAPFSYTNDNKQIVGYSIDLCQKIADAVKRELKLP 81 Query: 88 HMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFFAAVRMLVKKDSG 147 +++VQ++ VD+ TRF ++ GKADLEC ++TNNAERR FTVPHFF++VRM+VK SG Sbjct: 82 NLKVQYLPVDSSTRFSSIIDGKADLECGSTTNNAERRTRVGFTVPHFFSSVRMVVKNGSG 141 Query: 148 IRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFDSVEKGKADAFVM 207 I+NW DLR KT+V+ ++T + L+ RS +RSLN++++E + ++F VE+GKADA+ M Sbjct: 142 IKNWSDLRNKTMVITKSTTTIDLVNDRSNVRSLNIKVLEAQDDAESFAFVEQGKADAYAM 201 Query: 208 EDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQMVRIVRSGEIYR 267 +DVLL + P +Y ++G+ LS+EPY +M+RK DP FKK VD +MVR++ GE+ + Sbjct: 202 DDVLLYSLRSTAKNPADYTILGDPLSIEPYSLMLRKDDPAFKKVVDQEMVRLINEGELKK 261 Query: 268 IYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVG 304 IY WF QP K +++MPMG++LRD+L+YP+DK Sbjct: 262 IYSYWFTQPNGPKGSNLNMPMGYLLRDSLQYPSDKTA 298 >ref|YP_004753289.1| putative amino-acid-binding periplasmic (pbp) ABC transporter protein [Collimonas fungivorans Ter331] gb|AEK62466.1| putative amino-acid-binding periplasmic (pbp) ABC transporter protein [Collimonas fungivorans Ter331] Length = 303 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 138/277 (49%), Positives = 188/277 (67%) Query: 29 QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRNIAEGLRKELKLPH 88 +A A T+ KIR T V +AY T PF++L DK G+TI+LC I EG+R+ELKLP Sbjct: 27 EAIAGATMAKIRDTQTVTVAYRETTAPFSYLDADKKPIGFTIDLCSKIIEGIRQELKLPQ 86 Query: 89 MQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFFAAVRMLVKKDSGI 148 ++V +M V TR A+ G+ADLEC T+TNNAERRK AFTVPHFFA VRM V+ DSGI Sbjct: 87 LKVAYMAVTPSTRINAIASGQADLECGTTTNNAERRKQVAFTVPHFFAGVRMAVRTDSGI 146 Query: 149 RNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFDSVEKGKADAFVME 208 +NW +LRGK VV + T VKLL R+K+R L + +V+ + ++F +EKG+ AFVM+ Sbjct: 147 KNWANLRGKEVVTTKGTTTVKLLNDRNKVRVLALNLVDGTDHAESFSMLEKGQVAAFVMD 206 Query: 209 DVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQMVRIVRSGEIYRI 268 DV+L ++ P+ + +VG+ LS+EPY IM+ K D EFK VD QM + G+ +I Sbjct: 207 DVILYGLRANMMHPEEFAIVGDPLSVEPYAIMLTKDDAEFKAAVDRQMANMQNDGDFRKI 266 Query: 269 YDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 Y +WF+ PI + SM+MPMG++LRD + YPTDK+ D Sbjct: 267 YSKWFMSPIPPRGKSMNMPMGYLLRDAILYPTDKIND 303 >ref|YP_003746299.1| glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] emb|CBJ43698.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] Length = 303 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 183/290 (63%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A A L++IR T V IAY +PF++ DK GY ++LC Sbjct: 14 LCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ+++V +R + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV + T + + + + R L++++ EV + DAF Sbjct: 134 AGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHADAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAFVM+DV L + + P +Y VVG+ +++EPY IM+ K DPEFK+ VD Sbjct: 194 MVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRTVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + + Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTSIILDYDAEKFYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >emb|CBJ38124.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CMR15] Length = 304 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 131/291 (45%), Positives = 183/291 (62%), Gaps = 7/291 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFL-GDDKLVTGYTIELCR 74 LC +L + A A L++IR T V IAY +PF++ D K GYT++LC Sbjct: 14 LCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVDLCL 73 Query: 75 NIAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHF 134 + + LR ELK P ++VQ++ + TR A+ +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 RVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNNRERREQVAFTIPHY 133 Query: 135 FAAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAF 194 A +RMLVK SGI W+DLR KTVV + T V L + + R L ++ EV + +AF Sbjct: 134 IAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEHAEAF 193 Query: 195 DSVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDL 254 VE GKADAFVM+DV L + + P++Y VVG+ +++EPY IM+ K DP+FK VD Sbjct: 194 AMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKHTVDR 253 Query: 255 QMVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + ++Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 AMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 304 >gb|AEG69695.1| glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein [Ralstonia solanacearum Po82] Length = 303 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 181/290 (62%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A A L++IR T V IAY +PF++ DK GY ++LC Sbjct: 14 LCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ++ V TR + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRTELKRPDLKVQYVLVTPSTRIPTILEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV + T + + + + R L++++ EV + DAF Sbjct: 134 AGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDARVLHMKVEEVKEHADAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAFVM+DV L + + P +Y VVG+ +++EPY IM+ K DPEFK VD Sbjct: 194 MVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + + Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTAIILDYDAEKFYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303