BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0060.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777242.1| glutamate/aspartate ABC transporter permease... 452 e-125 ref|YP_004754626.1| glutamate aspartate transport system permeas... 413 e-113 ref|ZP_08274377.1| Glutamate Aspartate transport system permease... 328 5e-88 ref|YP_001771319.1| polar amino acid ABC transporter inner membr... 300 1e-79 ref|YP_002499649.1| polar amino acid ABC transporter inner membr... 297 1e-78 >ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/249 (88%), Positives = 236/249 (94%) Query: 1 MHYNWNWGIFWEQSPDGIPYIDTLLIGLKWTIATAVLAWIMALILGTVIGTIRTTQKPWA 60 MHYNWNWGIFWE SPDGIPYIDTLL GLKWT+ATA AWIMALILGT+ GT+RTT KPW Sbjct: 1 MHYNWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWV 60 Query: 61 VKIANGYVELFRNIPLLVQMFLWYFVMPELVPAAMGDWLKSLPEASFVTAFLALGFFTSS 120 V+IANGYVELFRNIPLLVQMFLWYFVMPEL+PA +GDW+KSLP+ASFVTA LALGFFTSS Sbjct: 61 VRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSS 120 Query: 121 RVAVQVSTGINALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS 180 RVAVQV+TGI ALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS Sbjct: 121 RVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS 180 Query: 181 VALTIGLVELTAATYSMREFTFQTFESLTGATVIYIIISVIALMLARFLERVTAVPGYIT 240 VALTIGLVELTAATYSMREFTFQTFE+LTGAT+IY+IISVIAL +AR LE+VTAVPGYIT Sbjct: 181 VALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYIT 240 Query: 241 TGSSSSGGH 249 GS+S+GGH Sbjct: 241 GGSTSAGGH 249 >ref|YP_004754626.1| glutamate aspartate transport system permease gltJ [Collimonas fungivorans Ter331] gb|AEK63803.1| Glutamate Aspartate transport system permease protein gltJ [Collimonas fungivorans Ter331] Length = 250 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/250 (79%), Positives = 229/250 (91%), Gaps = 1/250 (0%) Query: 1 MHYNWNWGIFWEQSPDGIP-YIDTLLIGLKWTIATAVLAWIMALILGTVIGTIRTTQKPW 59 MHYNWNWGIFW++SPDG+ Y+DTLL GLKWT+A + AWIMAL++GTVIGTIRT W Sbjct: 1 MHYNWNWGIFWQESPDGVSTYMDTLLAGLKWTLALSASAWIMALVIGTVIGTIRTMPNKW 60 Query: 60 AVKIANGYVELFRNIPLLVQMFLWYFVMPELVPAAMGDWLKSLPEASFVTAFLALGFFTS 119 AV++ANGYVELFRNIPL+VQMFLWYFVMPE+VPA +G+WLKSLP ASF+TAFLALGFFTS Sbjct: 61 AVRVANGYVELFRNIPLIVQMFLWYFVMPEIVPAGIGNWLKSLPNASFITAFLALGFFTS 120 Query: 120 SRVAVQVSTGINALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SR+AVQVS GINALPRGQ++AG ALGLT QTYRYVLLPM+FRIIIP+LTNEFAAIIKNS Sbjct: 121 SRIAVQVSAGINALPRGQKLAGTALGLTLPQTYRYVLLPMSFRIIIPSLTNEFAAIIKNS 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFESLTGATVIYIIISVIALMLARFLERVTAVPGYI 239 SVALTIGLVELTAATYSMREFTFQTFE+LTGATVIY+IIS IAL+LAR+LE+ A+PG+I Sbjct: 181 SVALTIGLVELTAATYSMREFTFQTFEALTGATVIYVIISGIALLLARWLEKAIAIPGFI 240 Query: 240 TTGSSSSGGH 249 GS+++GGH Sbjct: 241 AAGSANTGGH 250 >ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] Length = 247 Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 169/250 (67%), Positives = 203/250 (81%), Gaps = 4/250 (1%) Query: 1 MHYNWNWGIFWEQSPDGI-PYIDTLLIGLKWTIATAVLAWIMALILGTVIGTIRTTQKPW 59 M+YNWNW IFW SPDG+ Y+DTL+ GL WT+ATA+ AW+MAL +G ++GTIRT W Sbjct: 1 MNYNWNWQIFWAPSPDGVGTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRW 60 Query: 60 AVKIANGYVELFRNIPLLVQMFLWYFVMPELVPAAMGDWLKSLPEASFVTAFLALGFFTS 119 AV++ANGYVELFRNIPLLVQMFLWYFVMPELVPA+MG+WLK++P A F+TA + LGFFTS Sbjct: 61 AVRLANGYVELFRNIPLLVQMFLWYFVMPELVPASMGNWLKAMPNAPFITAVICLGFFTS 120 Query: 120 SRVAVQVSTGINALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVAVQVS GI ALPRGQ +AG ALGLT QTYR+VLLPMAFRI++P LT+EF IIKNS Sbjct: 121 SRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLPPLTSEFLNIIKNS 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFESLTGATVIYIIISVIALMLARFLERVTAVPGYI 239 SVALTIGL+ELTA SM EF+FQ FE+ T T+IYI++++I + L LE+ AVPG+I Sbjct: 181 SVALTIGLMELTARARSMSEFSFQVFEAFTAVTIIYIVVNIIVVNLMGLLEKKVAVPGFI 240 Query: 240 TTGSSSSGGH 249 G SGGH Sbjct: 241 VAG---SGGH 247 >ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 240 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 149/238 (62%), Positives = 184/238 (77%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEQSPDGI-PYIDTLLIGLKWTIATAVLAWIMALILGTVIGTIRTTQKPW 59 M+YNWNW IF+E SP+G Y D LL GL WTI TA+ AW++A +G+VIG +RT + Sbjct: 1 MNYNWNWSIFFEPSPEGTGTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTLPNRF 60 Query: 60 AVKIANGYVELFRNIPLLVQMFLWYFVMPELVPAAMGDWLKSLPEASFVTAFLALGFFTS 119 A NGYVELFRNIPLLVQMFLW+FV+PE++P + G WLK LP+A F TA + LGFFT+ Sbjct: 61 AQAFGNGYVELFRNIPLLVQMFLWFFVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFTA 120 Query: 120 SRVAVQVSTGINALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVA QV GI ALPRGQRMAG ALGLT QTYRYVLLP A+RII+P LT+EF +KN+ Sbjct: 121 SRVAEQVRAGIQALPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILPPLTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFESLTGATVIYIIISVIALMLARFLERVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FE+ T AT++YIII+++ + A +LER A+PG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLLVVTAAGYLERKVAIPG 238 >ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 240 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/238 (62%), Positives = 182/238 (76%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEQSPDGI-PYIDTLLIGLKWTIATAVLAWIMALILGTVIGTIRTTQKPW 59 M+YNWNW IF++ SP+G Y D LL GL WTI TA+ AWI+A +G+VIG +RT Sbjct: 1 MNYNWNWSIFFDLSPEGTGTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTLPNRA 60 Query: 60 AVKIANGYVELFRNIPLLVQMFLWYFVMPELVPAAMGDWLKSLPEASFVTAFLALGFFTS 119 A NGYVE+FRNIPLLVQMFLW+FV+PEL+P G WLK LP+A F TA + LGFFT+ Sbjct: 61 AQAFGNGYVEVFRNIPLLVQMFLWFFVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFTA 120 Query: 120 SRVAVQVSTGINALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVA QV GI +LPRGQRMAG ALGLT QTYRYVLLP A+RII+P LT+EF +KN+ Sbjct: 121 SRVAEQVRAGIQSLPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILPPLTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFESLTGATVIYIIISVIALMLARFLERVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FE+ T AT++YIII+++ + A FLER A+PG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLVVVTAAGFLERKVAIPG 238