BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0055.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777239.1| dihydroorotase [Herbaspirillum seropedicae S... 622 e-176 ref|YP_001351973.1| dihydroorotase [Janthinobacterium sp. Marsei... 614 e-174 ref|YP_004754623.1| dihydroorotase [Collimonas fungivorans Ter33... 613 e-173 ref|YP_001098587.1| dihydroorotase [Herminiimonas arsenicoxydans... 603 e-170 ref|YP_001795823.1| dihydroorotase [Cupriavidus taiwanensis LMG ... 587 e-166 >ref|YP_003777239.1| dihydroorotase [Herbaspirillum seropedicae SmR1] gb|ADJ65331.1| dihydroorotase protein [Herbaspirillum seropedicae SmR1] Length = 344 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 291/343 (84%), Positives = 315/343 (91%) Query: 1 MSDVVTITRPDDWHLHLRDGATMASVLPHTVHQFARAIVMPNLKPPVTTVALASAYRDRI 60 MS+V+TITRPDDWHLHLRDGATM VLPHT QFARAIVMPNLKPPVTT A A AYR+RI Sbjct: 1 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRERI 60 Query: 61 LAALPAGSDFEPLMVLYLTDNTPPEEIRKAKDSGFVHAVKLYPAGATTNSDAGVTDLRNC 120 LAALP G FEPLMVLYLTDNTPP+EIR+AK+SGFV AVKLYPAGATTNSDAGVTDL C Sbjct: 61 LAALPQGMSFEPLMVLYLTDNTPPDEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC 120 Query: 121 YKTLEVLQETGMPFLVHGEVTDPAIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKD 180 YKTLEVLQE GMPFLVHGEVTDP ID+FDREAVFI+R+M PLR+ MPELKVVFEHITTK+ Sbjct: 121 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFIERIMKPLRQAMPELKVVFEHITTKE 180 Query: 181 AADYVMSSEGPTAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRETHRQALVAAAISGS 240 AADYV++ EGPTAATITAHHLL+NRNEIFKGGIRPHYYCLPVLKRETHR+ALVAAA SG+ Sbjct: 181 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN 240 Query: 241 DKFFLGTDSAPHAKGLKEHACGCAGCYTALHALELYAQAFDQAGALDKLEAFASFNGPDF 300 +KFFLGTDSAPHAKG KEHACGCAGCYTALHALELYAQAFD AGALDK EAFASFNGPDF Sbjct: 241 NKFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF 300 Query: 301 YDLPRNQGSVTLRRENWTIPAELPMGDTSVVPLNGGETIAWKM 343 YDLPRN G+VTL+RE W+IPAELPMG+ +VVPL+ GE + WKM Sbjct: 301 YDLPRNTGTVTLKRETWSIPAELPMGEATVVPLSAGEQMNWKM 343 >ref|YP_001351973.1| dihydroorotase [Janthinobacterium sp. Marseille] gb|ABR88863.1| dihydroorotase, homodimeric type [Janthinobacterium sp. Marseille] Length = 352 Score = 614 bits (1583), Expect = e-174, Method: Compositional matrix adjust. Identities = 288/339 (84%), Positives = 310/339 (91%) Query: 5 VTITRPDDWHLHLRDGATMASVLPHTVHQFARAIVMPNLKPPVTTVALASAYRDRILAAL 64 +TITRPDDWHLHLRDGAT+ASVLP T QFARAIVMPNLKPPVTT A A AYRDRILAAL Sbjct: 13 ITITRPDDWHLHLRDGATIASVLPDTARQFARAIVMPNLKPPVTTTAQALAYRDRILAAL 72 Query: 65 PAGSDFEPLMVLYLTDNTPPEEIRKAKDSGFVHAVKLYPAGATTNSDAGVTDLRNCYKTL 124 PAG FEPLMVLYLTDNTPPEEI++AK+SG VHAVKLYPAGATTNSDAGV+DL CYKTL Sbjct: 73 PAGMSFEPLMVLYLTDNTPPEEIQRAKESGAVHAVKLYPAGATTNSDAGVSDLTKCYKTL 132 Query: 125 EVLQETGMPFLVHGEVTDPAIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKDAADY 184 E++Q+ GMPFLVHGEVTDPAIDIFDREAVFIDRVM PLRRDMPELKVVFEHITTKDAA Y Sbjct: 133 EMMQKVGMPFLVHGEVTDPAIDIFDREAVFIDRVMKPLRRDMPELKVVFEHITTKDAAQY 192 Query: 185 VMSSEGPTAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRETHRQALVAAAISGSDKFF 244 V ++G ATITAHHLLYNRNE+FKGGIRPHYYCLPVLKRE HRQALVAAAISGS+KFF Sbjct: 193 VAEADGHVGATITAHHLLYNRNELFKGGIRPHYYCLPVLKREIHRQALVAAAISGSNKFF 252 Query: 245 LGTDSAPHAKGLKEHACGCAGCYTALHALELYAQAFDQAGALDKLEAFASFNGPDFYDLP 304 LGTDSAPHAKGLKEHACGCAGCYTALHA+ELY QAFDQA ALDKLE FASFNGPDFY LP Sbjct: 253 LGTDSAPHAKGLKEHACGCAGCYTALHAMELYTQAFDQADALDKLEQFASFNGPDFYQLP 312 Query: 305 RNQGSVTLRRENWTIPAELPMGDTSVVPLNGGETIAWKM 343 RN G++TL+RE W IPAE+P+G+T++VPLNGGETI WK Sbjct: 313 RNTGTITLQREEWQIPAEVPLGNTTLVPLNGGETIGWKF 351 >ref|YP_004754623.1| dihydroorotase [Collimonas fungivorans Ter331] gb|AEK63800.1| Dihydroorotase [Collimonas fungivorans Ter331] Length = 354 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 287/344 (83%), Positives = 312/344 (90%) Query: 1 MSDVVTITRPDDWHLHLRDGATMASVLPHTVHQFARAIVMPNLKPPVTTVALASAYRDRI 60 ++D +TITRPDDWHLHLRDG +A+VLPH+ QF RAIVMPNLKPPVTT A A+AYRDRI Sbjct: 11 LTDTLTITRPDDWHLHLRDGVALAAVLPHSARQFGRAIVMPNLKPPVTTTAQAAAYRDRI 70 Query: 61 LAALPAGSDFEPLMVLYLTDNTPPEEIRKAKDSGFVHAVKLYPAGATTNSDAGVTDLRNC 120 LA LP FEPLM LYLT+NTPP+EIR+AKDSGFVHAVKLYPAGATTNSDAGVTDL C Sbjct: 71 LAVLPPDLAFEPLMTLYLTNNTPPDEIRRAKDSGFVHAVKLYPAGATTNSDAGVTDLSKC 130 Query: 121 YKTLEVLQETGMPFLVHGEVTDPAIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKD 180 YKTLEV+QE GMPFLVHGEVTDPAIDIFDREAVFIDRVM PLRRDMPELKVVFEHITTKD Sbjct: 131 YKTLEVMQELGMPFLVHGEVTDPAIDIFDREAVFIDRVMQPLRRDMPELKVVFEHITTKD 190 Query: 181 AADYVMSSEGPTAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRETHRQALVAAAISGS 240 AA YV S+ GP AAT+TAHHLLYNRNEIFKGGIRPHYYCLPVLKRE HRQALV A SGS Sbjct: 191 AAQYVESAGGPVAATVTAHHLLYNRNEIFKGGIRPHYYCLPVLKREEHRQALVQAVTSGS 250 Query: 241 DKFFLGTDSAPHAKGLKEHACGCAGCYTALHALELYAQAFDQAGALDKLEAFASFNGPDF 300 +FFLGTDSAPH KGLKEHACGCAGCYTALHA+ELYAQAFDQAGALDKLEAFASFNGP F Sbjct: 251 TRFFLGTDSAPHPKGLKEHACGCAGCYTALHAMELYAQAFDQAGALDKLEAFASFNGPAF 310 Query: 301 YDLPRNQGSVTLRRENWTIPAELPMGDTSVVPLNGGETIAWKMA 344 Y+LPRNQG+VTL+R+ WT+PAELP+G+T++VPLNGGETI W+ A Sbjct: 311 YNLPRNQGTVTLKRQPWTLPAELPLGETTLVPLNGGETIDWQFA 354 >ref|YP_001098587.1| dihydroorotase [Herminiimonas arsenicoxydans] emb|CAL60458.1| Dihydroorotase (DHOase) [Herminiimonas arsenicoxydans] Length = 352 Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust. Identities = 282/339 (83%), Positives = 304/339 (89%) Query: 5 VTITRPDDWHLHLRDGATMASVLPHTVHQFARAIVMPNLKPPVTTVALASAYRDRILAAL 64 +TITRPDDWHLHLRDGAT+ASVLP T QFARAIVMPNLKPPVTT A A AYR+RILAAL Sbjct: 13 ITITRPDDWHLHLRDGATIASVLPDTARQFARAIVMPNLKPPVTTTAQAVAYRERILAAL 72 Query: 65 PAGSDFEPLMVLYLTDNTPPEEIRKAKDSGFVHAVKLYPAGATTNSDAGVTDLRNCYKTL 124 PAG FEPLM LYLT+NTPPEEI++A+DSG VHAVKLYPAGATTNSDAGV+DL CYKTL Sbjct: 73 PAGMQFEPLMTLYLTNNTPPEEIQRARDSGVVHAVKLYPAGATTNSDAGVSDLSKCYKTL 132 Query: 125 EVLQETGMPFLVHGEVTDPAIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKDAADY 184 E +Q+ GMPFLVHGEVTDP +DIFDREAVFIDRVM PLRRDMPELKVVFEHITTKDAA Y Sbjct: 133 EAMQKIGMPFLVHGEVTDPNVDIFDREAVFIDRVMQPLRRDMPELKVVFEHITTKDAAQY 192 Query: 185 VMSSEGPTAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRETHRQALVAAAISGSDKFF 244 V ++ AATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRE HRQALVAAA SGS+KFF Sbjct: 193 VAEADRHVAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRELHRQALVAAATSGSNKFF 252 Query: 245 LGTDSAPHAKGLKEHACGCAGCYTALHALELYAQAFDQAGALDKLEAFASFNGPDFYDLP 304 LGTDSAPH KGLKEHACGCAGCYTALHA+ELY QAFDQA ALDKLE FASFNGPDFY LP Sbjct: 253 LGTDSAPHPKGLKEHACGCAGCYTALHAMELYTQAFDQADALDKLEQFASFNGPDFYSLP 312 Query: 305 RNQGSVTLRRENWTIPAELPMGDTSVVPLNGGETIAWKM 343 RN G++TLRRE W +P ELP+G+T++VPLNGGETI WK Sbjct: 313 RNTGTITLRREEWQVPGELPLGETTLVPLNGGETIGWKF 351 >ref|YP_001795823.1| dihydroorotase [Cupriavidus taiwanensis LMG 19424] sp|B2AH54.1|PYRC_CUPTR RecName: Full=Dihydroorotase; Short=DHOase emb|CAP63103.1| dihydro-orotase [Cupriavidus taiwanensis LMG 19424] Length = 344 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 277/342 (80%), Positives = 300/342 (87%) Query: 1 MSDVVTITRPDDWHLHLRDGATMASVLPHTVHQFARAIVMPNLKPPVTTVALASAYRDRI 60 M+ +TITRPDDWHLHLRDGA +A+VLP T QFARAIVMPNLKPPVTTVA A AYR RI Sbjct: 1 MTQKLTITRPDDWHLHLRDGAALAAVLPDTARQFARAIVMPNLKPPVTTVAQAQAYRARI 60 Query: 61 LAALPAGSDFEPLMVLYLTDNTPPEEIRKAKDSGFVHAVKLYPAGATTNSDAGVTDLRNC 120 LAALPAG FEPLM LYLTDNT PEEI A+ SGFVH VKLYPAGATTNSDAGVTD+R C Sbjct: 61 LAALPAGMQFEPLMTLYLTDNTGPEEIAAARASGFVHGVKLYPAGATTNSDAGVTDIRRC 120 Query: 121 YKTLEVLQETGMPFLVHGEVTDPAIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKD 180 Y LE +Q G+P LVHGEVTDPAIDIFDREAVFI+RVMTPLRRDMPELKVVFEHITTKD Sbjct: 121 YPALEAMQRAGLPLLVHGEVTDPAIDIFDREAVFIERVMTPLRRDMPELKVVFEHITTKD 180 Query: 181 AADYVMSSEGPTAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRETHRQALVAAAISGS 240 AA YV + GP ATITAHHLLYNRN IF GGIRPHYYCLPVLKRETHR+ALVAAA SGS Sbjct: 181 AAQYVRDASGPVGATITAHHLLYNRNAIFTGGIRPHYYCLPVLKRETHREALVAAATSGS 240 Query: 241 DKFFLGTDSAPHAKGLKEHACGCAGCYTALHALELYAQAFDQAGALDKLEAFASFNGPDF 300 ++FFLGTDSAPHA+GLKEHACGCAGCYTALHA+ELYA+AFD AGALDKLEAFASFNGP F Sbjct: 241 ERFFLGTDSAPHARGLKEHACGCAGCYTALHAMELYAEAFDAAGALDKLEAFASFNGPAF 300 Query: 301 YDLPRNQGSVTLRRENWTIPAELPMGDTSVVPLNGGETIAWK 342 Y LPRN G++TL RE+W +PAELP GDT++VPL GGET+ WK Sbjct: 301 YGLPRNTGTLTLEREDWELPAELPYGDTTLVPLRGGETLRWK 342