BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0054.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777238.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoqui... 333 1e-89 ref|YP_004754616.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoqui... 313 1e-83 ref|ZP_08275134.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin... 266 1e-69 ref|YP_001098596.1| putative ubiquinone biosynthesis protein COQ... 259 2e-67 sp|A4G1T0.2|COQ7_HERAR RecName: Full=2-nonaprenyl-3-methyl-6-met... 259 2e-67 >ref|YP_003777238.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Herbaspirillum seropedicae SmR1] sp|A2RPN0.1|COQ7_HERSE RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase emb|CAM32537.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiquinone biosynthesis) protein [Herbaspirillum seropedicae] gb|ADJ65330.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiquinone biosynthesis) protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 158/208 (75%), Positives = 180/208 (86%) Query: 1 MLFADKLIHDLDKALRVVSGVVASSRPNPAAQIGDAAMSDAEKRHSAGLMRVNHVGEVCA 60 M F D+LI D DKALRV++GVV SRPNP + D MS+AEKRH+AGLMRVN+VGEVCA Sbjct: 1 MQFVDELISDFDKALRVINGVVFESRPNPGRGLPDGVMSEAEKRHAAGLMRVNNVGEVCA 60 Query: 61 QALYDAQGRFTQAQALKQQFAHAGIEEEDHLAWTAERLRELGSHTSLLNPLWYVGSYLLG 120 QALYDAQGRF Q +K FA AGIEEEDHLAWTAERLRELGSHTSLLNPLWY G+Y+LG Sbjct: 61 QALYDAQGRFAQKAEIKNAFARAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLG 120 Query: 121 SIAARVGDARNLGFVAETERQVELHLISHLEKLPAQDAKSRAIVDQMRKDEVEHGEAAKA 180 SIAAR+GDARNLGFV+ETERQVE HL+ HL+KLPAQD +SRAIVDQMR DE+EHG+AA+ Sbjct: 121 SIAARLGDARNLGFVSETERQVEHHLMGHLDKLPAQDNRSRAIVDQMRIDEIEHGQAARD 180 Query: 181 LGAAEMPAAIRGAMKIMSKVMTTVAYRV 208 LGAAEMPA ++G MK M+KVMTTVAYR+ Sbjct: 181 LGAAEMPAPVKGLMKAMAKVMTTVAYRI 208 >ref|YP_004754616.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Collimonas fungivorans Ter331] gb|AEK63793.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Collimonas fungivorans Ter331] Length = 238 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 149/208 (71%), Positives = 171/208 (82%) Query: 1 MLFADKLIHDLDKALRVVSGVVASSRPNPAAQIGDAAMSDAEKRHSAGLMRVNHVGEVCA 60 MLF D++I D D ALRV++G ++SRPNPA D + AE+RHSAGLMRVNHVGEVCA Sbjct: 31 MLFLDRVIADFDNALRVITGQASASRPNPALLAADGVLDAAEQRHSAGLMRVNHVGEVCA 90 Query: 61 QALYDAQGRFTQAQALKQQFAHAGIEEEDHLAWTAERLRELGSHTSLLNPLWYVGSYLLG 120 QALYDAQGRF Q +KQQFA AG EEEDHLAWTAERLRELGSH SLLNPLWY GSY LG Sbjct: 91 QALYDAQGRFAQGDPIKQQFAAAGREEEDHLAWTAERLRELGSHVSLLNPLWYAGSYALG 150 Query: 121 SIAARVGDARNLGFVAETERQVELHLISHLEKLPAQDAKSRAIVDQMRKDEVEHGEAAKA 180 ++AAR+GD R+L FV+ETERQVE HL SHLE+LP QDAKSRAIV+QMR DE+ HG AA++ Sbjct: 151 TLAARLGDVRSLSFVSETERQVEAHLSSHLEQLPLQDAKSRAIVEQMRDDEIAHGAAARS 210 Query: 181 LGAAEMPAAIRGAMKIMSKVMTTVAYRV 208 LGAAEMP ++ M+ MSKVMTTVAY V Sbjct: 211 LGAAEMPRPVQKVMQAMSKVMTTVAYYV 238 >ref|ZP_08275134.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31393.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Oxalobacteraceae bacterium IMCC9480] Length = 209 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 128/202 (63%), Positives = 154/202 (76%) Query: 5 DKLIHDLDKALRVVSGVVASSRPNPAAQIGDAAMSDAEKRHSAGLMRVNHVGEVCAQALY 64 D I D ALR+++GV ++R +PA + D AMS+ ++RHSAGLMRVNHVGEVCAQALY Sbjct: 6 DNWIAGFDSALRIIAGVAVAARASPALAVEDVAMSEEDRRHSAGLMRVNHVGEVCAQALY 65 Query: 65 DAQGRFTQAQALKQQFAHAGIEEEDHLAWTAERLRELGSHTSLLNPLWYVGSYLLGSIAA 124 AQG+F ++ AL QFAHA EEEDHLAWTAER+ +LGSHTS+LNP+W+ GSYLLG AA Sbjct: 66 QAQGQFARSAALTGQFAHAAREEEDHLAWTAERIAQLGSHTSVLNPIWFAGSYLLGIAAA 125 Query: 125 RVGDARNLGFVAETERQVELHLISHLEKLPAQDAKSRAIVDQMRKDEVEHGEAAKALGAA 184 R GD R+LGFV ETERQVE HL HL+ LPA D SRAIV QMR DE+ HG AA+ LGA+ Sbjct: 126 RAGDKRSLGFVVETERQVEAHLTHHLDTLPATDTMSRAIVLQMRDDEIAHGAAAQELGAS 185 Query: 185 EMPAAIRGAMKIMSKVMTTVAY 206 E+P R M ++SKVMT AY Sbjct: 186 ELPKPARLLMGVISKVMTRTAY 207 >ref|YP_001098596.1| putative ubiquinone biosynthesis protein COQ7 [Herminiimonas arsenicoxydans] emb|CAL60467.1| Putative ubiquinone biosynthesis protein [Herminiimonas arsenicoxydans] Length = 224 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/204 (64%), Positives = 160/204 (78%) Query: 5 DKLIHDLDKALRVVSGVVASSRPNPAAQIGDAAMSDAEKRHSAGLMRVNHVGEVCAQALY 64 D+ I D ALRV+SGV A+SRP+PA+ + D + DAE+RHSAGLMRVNHVGEVCAQALY Sbjct: 21 DRFIRHFDSALRVMSGVSAASRPSPASGVADGVLDDAERRHSAGLMRVNHVGEVCAQALY 80 Query: 65 DAQGRFTQAQALKQQFAHAGIEEEDHLAWTAERLRELGSHTSLLNPLWYVGSYLLGSIAA 124 AQ +F + A+KQQF AG EEEDHLAWTA+RLRELGSH SLLNPLWY G+Y LG++AA Sbjct: 81 QAQAQFAHSDAIKQQFELAGREEEDHLAWTAQRLRELGSHPSLLNPLWYAGAYALGTVAA 140 Query: 125 RVGDARNLGFVAETERQVELHLISHLEKLPAQDAKSRAIVDQMRKDEVEHGEAAKALGAA 184 ++GDAR+LGFV ETERQVE HL H+ +LP QDAKS A+V QM DEV HG AA+ALGA Sbjct: 141 KLGDARSLGFVVETERQVEAHLNEHMNRLPPQDAKSLAVVAQMSADEVAHGSAAQALGAQ 200 Query: 185 EMPAAIRGAMKIMSKVMTTVAYRV 208 +P + M+ +SK+MTT AY + Sbjct: 201 AVPPLAQKGMQAISKIMTTTAYYI 224 >sp|A4G1T0.2|COQ7_HERAR RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase Length = 211 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/204 (64%), Positives = 160/204 (78%) Query: 5 DKLIHDLDKALRVVSGVVASSRPNPAAQIGDAAMSDAEKRHSAGLMRVNHVGEVCAQALY 64 D+ I D ALRV+SGV A+SRP+PA+ + D + DAE+RHSAGLMRVNHVGEVCAQALY Sbjct: 8 DRFIRHFDSALRVMSGVSAASRPSPASGVADGVLDDAERRHSAGLMRVNHVGEVCAQALY 67 Query: 65 DAQGRFTQAQALKQQFAHAGIEEEDHLAWTAERLRELGSHTSLLNPLWYVGSYLLGSIAA 124 AQ +F + A+KQQF AG EEEDHLAWTA+RLRELGSH SLLNPLWY G+Y LG++AA Sbjct: 68 QAQAQFAHSDAIKQQFELAGREEEDHLAWTAQRLRELGSHPSLLNPLWYAGAYALGTVAA 127 Query: 125 RVGDARNLGFVAETERQVELHLISHLEKLPAQDAKSRAIVDQMRKDEVEHGEAAKALGAA 184 ++GDAR+LGFV ETERQVE HL H+ +LP QDAKS A+V QM DEV HG AA+ALGA Sbjct: 128 KLGDARSLGFVVETERQVEAHLNEHMNRLPPQDAKSLAVVAQMSADEVAHGSAAQALGAQ 187 Query: 185 EMPAAIRGAMKIMSKVMTTVAYRV 208 +P + M+ +SK+MTT AY + Sbjct: 188 AVPPLAQKGMQAISKIMTTTAYYI 211