BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0041.p         (138 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08275964.1| twitching motility protein PilG [Oxalobactera...   188   3e-46
ref|YP_001100985.1| twitching motility protein [Herminiimonas ar...   183   8e-45
ref|YP_004751450.1| twitching motility protein [Collimonas fungi...   180   6e-44
gb|EGW62621.1| response regulator receiver protein [Dechlorosoma...   180   8e-44
ref|YP_001354646.1| PilG twitching motility two-component system...   179   9e-44

>ref|ZP_08275964.1| twitching motility protein PilG [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30564.1| twitching motility protein PilG [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 143

 Score =  188 bits (477), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 110/137 (80%), Gaps = 2/137 (1%)

Query: 2   TDVQARHSFTILVVDDSATIRRSAALFLGQAGHQVMLAEDGFDALSQLGDCTPDLIFCDV 61
           T+     S  ++V+DDS+TIRRSA +FLGQAG+QV+LAEDGFDAL+++ D  P LIFCD+
Sbjct: 5   TETPEPASLKVMVIDDSSTIRRSAEIFLGQAGYQVVLAEDGFDALAKMNDSRPALIFCDI 64

Query: 62  LMPRLDGYQTCALIKKNARFHATPVVMLSSKDGLFDRAXDSGAIVGAAAFMTKPFTEDGM 121
           LMPRLDGYQTCALIKK+ARFHATPV+MLSSKDGLFDRA   GA+VG+ A++TKPFT+D +
Sbjct: 65  LMPRLDGYQTCALIKKSARFHATPVIMLSSKDGLFDRA--RGALVGSDAYLTKPFTKDSL 122

Query: 122 LQAVRTYAGGQAAAAHL 138
           L+ VR +     A   L
Sbjct: 123 LKIVREFTATTQAVPVL 139


>ref|YP_001100985.1| twitching motility protein [Herminiimonas arsenicoxydans]
 emb|CAL62864.1| Type IV pilus response regulator PilG [Herminiimonas
           arsenicoxydans]
          Length = 133

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 107/123 (86%), Gaps = 2/123 (1%)

Query: 12  ILVVDDSATIRRSAALFLGQAGHQVMLAEDGFDALSQLGDCTPDLIFCDVLMPRLDGYQT 71
           I+V+DDS+TIRRSA +FLGQAG++V+LA+DGFDAL+++ D  P LIFCD+LMPRLDGYQT
Sbjct: 12  IMVIDDSSTIRRSAEIFLGQAGYKVVLADDGFDALAKMNDHKPALIFCDILMPRLDGYQT 71

Query: 72  CALIKKNARFHATPVVMLSSKDGLFDRAXDSGAIVGAAAFMTKPFTEDGMLQAVRTYAGG 131
           CALIKK+A+FH+TPV+MLSSKDGLFDRA   GA+VG+ A++TKPFT+D +L+ VR YA  
Sbjct: 72  CALIKKSAKFHSTPVIMLSSKDGLFDRA--RGAMVGSDAYLTKPFTKDSLLKTVREYAAE 129

Query: 132 QAA 134
             A
Sbjct: 130 AVA 132


>ref|YP_004751450.1| twitching motility protein [Collimonas fungivorans Ter331]
 gb|AEK60627.1| twitching motility protein [Collimonas fungivorans Ter331]
          Length = 138

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 105/120 (87%), Gaps = 2/120 (1%)

Query: 9   SFTILVVDDSATIRRSAALFLGQAGHQVMLAEDGFDALSQLGDCTPDLIFCDVLMPRLDG 68
           +  ++V+DDS+TIRRSA +FL QAG+QV+LAEDGFDAL+++ D  P LIFCD+LMPRLDG
Sbjct: 9   NLKVMVIDDSSTIRRSAEIFLSQAGYQVVLAEDGFDALAKVNDHKPALIFCDILMPRLDG 68

Query: 69  YQTCALIKKNARFHATPVVMLSSKDGLFDRAXDSGAIVGAAAFMTKPFTEDGMLQAVRTY 128
           YQTCALIKK+A+FHATPVVMLSSKDGLFDRA   GA+VG+  ++TKPFT+D +L+AVR +
Sbjct: 69  YQTCALIKKSAKFHATPVVMLSSKDGLFDRA--RGAMVGSDEYLTKPFTKDSLLKAVRQH 126


>gb|EGW62621.1| response regulator receiver protein [Dechlorosoma suillum PS]
          Length = 132

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 2/132 (1%)

Query: 1   MTDVQARHSFTILVVDDSATIRRSAALFLGQAGHQVMLAEDGFDALSQLGDCTPDLIFCD 60
           M D  A+    ++V+DDS TIRRSA +FL QAG QV+LAEDGFDAL+++ D  PD++FCD
Sbjct: 1   MPDATAQRGVKVMVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKIADHQPDIVFCD 60

Query: 61  VLMPRLDGYQTCALIKKNARFHATPVVMLSSKDGLFDRAXDSGAIVGAAAFMTKPFTEDG 120
           ++MPRLDGYQTCALIKKNARF  TPV+MLSSKDGLFDRA   G +VG+  ++TKPFT+D 
Sbjct: 61  IMMPRLDGYQTCALIKKNARFRNTPVIMLSSKDGLFDRA--RGRMVGSDQYLTKPFTKDS 118

Query: 121 MLQAVRTYAGGQ 132
           +LQAV TY   Q
Sbjct: 119 LLQAVATYGPQQ 130


>ref|YP_001354646.1| PilG twitching motility two-component system response regulator
           [Janthinobacterium sp. Marseille]
 gb|ABR90660.1| PilG twitching motility two-component system response regulator
           [Janthinobacterium sp. Marseille]
          Length = 133

 Score =  179 bits (455), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 106/118 (89%), Gaps = 2/118 (1%)

Query: 12  ILVVDDSATIRRSAALFLGQAGHQVMLAEDGFDALSQLGDCTPDLIFCDVLMPRLDGYQT 71
           I+V+DDS+TIRRSA +FLGQAG++V+LA+DGFDAL+++ D  P LIFCD+LMPRLDGYQT
Sbjct: 12  IMVIDDSSTIRRSAEIFLGQAGYKVVLADDGFDALAKMNDHRPALIFCDILMPRLDGYQT 71

Query: 72  CALIKKNARFHATPVVMLSSKDGLFDRAXDSGAIVGAAAFMTKPFTEDGMLQAVRTYA 129
           CALIKK+A+FH+TPV+MLSSKDGLFDRA   GA+VG+ A++TKPFT+D +L+ VR +A
Sbjct: 72  CALIKKSAKFHSTPVIMLSSKDGLFDRA--RGAMVGSDAYLTKPFTKDSLLKTVREHA 127