BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0037.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001100982.1| twitching motility transmembrane protein [He... 276 1e-72 ref|YP_004751453.1| twitching motility protein [Collimonas fungi... 276 2e-72 ref|ZP_08274269.1| twitching motility protein PilJ [Oxalobactera... 276 2e-72 ref|YP_003777226.1| twitching motility transmembrane protein [He... 270 2e-70 ref|YP_001354643.1| PilJ twitching motility protein [Janthinobac... 249 2e-64 >ref|YP_001100982.1| twitching motility transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62861.1| Putative twitching motility transmembrane protein PilJ-like [Herminiimonas arsenicoxydans] Length = 757 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 138/219 (63%), Positives = 166/219 (75%) Query: 2 LQSQGGNSPREAAAAAQLVLLTLRLGRSANEFLTSEGVNPETAFLLGKDVNTFRDIIDGF 61 L+SQ G +PRE AAA QLV+LT RL RSANEFL+SEGVNPETAFLLGKD NTFRDI DGF Sbjct: 226 LKSQSGATPREIAAAGQLVMLTQRLARSANEFLSSEGVNPETAFLLGKDTNTFRDITDGF 285 Query: 62 LNGSEILGINAVRDKDVRDKLNELEKVFGEYQPLVANILGNLQNFIAAKQSEQLVFLENE 121 LNGSE+L + + D R+KL EL+ F +YQ +A ILGNLQNFIAAKQ+++L+F ENE Sbjct: 286 LNGSEVLRLTKTTEPDTREKLVELQAAFADYQKSIAQILGNLQNFIAAKQAQELIFKENE 345 Query: 122 TLKQHLTVLQNDYRQAQETRSWTFWIMLLSMGLALVCGVGISWVQLQSSRRNAEEAELRR 181 LKQ LT LQ YR Q++ +W FW+ML S+ AL+ GI+ V LQ SR EA+ RR Sbjct: 346 ALKQRLTDLQQSYRTQQDSFTWPFWLMLASVFAALLSAAGIALVLLQDSRNRTNEADARR 405 Query: 182 QEAEAQRLHAQQQEERAMRTNAINQAAILRLMNELQKVA 220 +EAE QRL A++QEE A + N NQAAILRLMNELQ+VA Sbjct: 406 EEAEGQRLEARKQEEEAKQANDQNQAAILRLMNELQEVA 444 >ref|YP_004751453.1| twitching motility protein [Collimonas fungivorans Ter331] gb|AEK60630.1| twitching motility protein [Collimonas fungivorans Ter331] Length = 815 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/219 (63%), Positives = 171/219 (78%) Query: 2 LQSQGGNSPREAAAAAQLVLLTLRLGRSANEFLTSEGVNPETAFLLGKDVNTFRDIIDGF 61 L++Q G +PRE AA++QLV+LT RLGRSANEFLTSEGVNPETAFLLGKD NTFRDI+ GF Sbjct: 284 LKTQTGATPREIAASSQLVMLTQRLGRSANEFLTSEGVNPETAFLLGKDTNTFRDIVSGF 343 Query: 62 LNGSEILGINAVRDKDVRDKLNELEKVFGEYQPLVANILGNLQNFIAAKQSEQLVFLENE 121 LNGS++L + A + ++ R KL ELEK F EYQ VA+ILGN+QNF++AKQSEQL+F ENE Sbjct: 344 LNGSDVLRLPASKSEEERSKLTELEKSFAEYQESVASILGNMQNFVSAKQSEQLIFTENE 403 Query: 122 TLKQHLTVLQNDYRQAQETRSWTFWIMLLSMGLALVCGVGISWVQLQSSRRNAEEAELRR 181 LKQ L LQ+ YR AQ+++S FW+MLL+ L+ GI+WVQ+Q R EA++RR Sbjct: 404 NLKQRLGALQDTYRDAQDSQSIWFWLMLLAALTTLLAAAGIAWVQVQDGRHRTHEADVRR 463 Query: 182 QEAEAQRLHAQQQEERAMRTNAINQAAILRLMNELQKVA 220 EAEAQRL A +QEE A N NQAAILRLMNELQ+VA Sbjct: 464 MEAEAQRLQAIKQEEDASNANDQNQAAILRLMNELQEVA 502 >ref|ZP_08274269.1| twitching motility protein PilJ [Oxalobacteraceae bacterium IMCC9480] gb|EGF32260.1| twitching motility protein PilJ [Oxalobacteraceae bacterium IMCC9480] Length = 675 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 137/219 (62%), Positives = 170/219 (77%) Query: 2 LQSQGGNSPREAAAAAQLVLLTLRLGRSANEFLTSEGVNPETAFLLGKDVNTFRDIIDGF 61 L+ Q G +PRE +AA QLV+LT RLGRSANEFLT+EGVNP+TAFLLGKD NTFRDI++GF Sbjct: 144 LKVQNGATPREISAAGQLVMLTQRLGRSANEFLTAEGVNPDTAFLLGKDANTFRDIVEGF 203 Query: 62 LNGSEILGINAVRDKDVRDKLNELEKVFGEYQPLVANILGNLQNFIAAKQSEQLVFLENE 121 LNGSE+L + A RDKD RDKL EL+ +F +YQ V+ ILGNLQNFIAAKQ+EQL+F ENE Sbjct: 204 LNGSEVLRLGATRDKDSRDKLLELQTLFVKYQGAVSAILGNLQNFIAAKQAEQLIFTENE 263 Query: 122 TLKQHLTVLQNDYRQAQETRSWTFWIMLLSMGLALVCGVGISWVQLQSSRRNAEEAELRR 181 TLKQ L+ LQ YR Q+ ++W + M LS LA++ +GI+ V LQ SR +E+++RR Sbjct: 264 TLKQRLSTLQQSYRDRQDAQAWPLYAMALSALLAVLGAIGIALVLLQDSRNRRKESDMRR 323 Query: 182 QEAEAQRLHAQQQEERAMRTNAINQAAILRLMNELQKVA 220 Q+AE QR A+ Q+E A N NQAAILRLMNELQ+VA Sbjct: 324 QQAELQRFEAEHQQEEARSANDQNQAAILRLMNELQEVA 362 >ref|YP_003777226.1| twitching motility transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65318.1| twitching motility transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 753 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 143/220 (65%), Positives = 177/220 (80%) Query: 1 MLQSQGGNSPREAAAAAQLVLLTLRLGRSANEFLTSEGVNPETAFLLGKDVNTFRDIIDG 60 MLQSQ +PRE AA+QLV+LTLRLGRSANEFLTSEGVNPETAF+LGKD+ F D + Sbjct: 220 MLQSQSRPTPREMNAASQLVMLTLRLGRSANEFLTSEGVNPETAFMLGKDITAFGDQLTS 279 Query: 61 FLNGSEILGINAVRDKDVRDKLNELEKVFGEYQPLVANILGNLQNFIAAKQSEQLVFLEN 120 +G+E+L + D D+R+KL+ELE+VF +YQP +A ILG+LQNFIAAKQ+E+LVF+EN Sbjct: 280 LRDGNEMLRLRPASDPDLREKLDELERVFAQYQPQIAGILGHLQNFIAAKQAERLVFVEN 339 Query: 121 ETLKQHLTVLQNDYRQAQETRSWTFWIMLLSMGLALVCGVGISWVQLQSSRRNAEEAELR 180 ETLK+ LT LQ+DYR A ++RSWTFW ML++M +AL+ +GI+ VQLQSSR NA AE R Sbjct: 340 ETLKRQLTELQDDYRIALKSRSWTFWAMLVTMVMALLSAIGIALVQLQSSRNNAAAAEAR 399 Query: 181 RQEAEAQRLHAQQQEERAMRTNAINQAAILRLMNELQKVA 220 RQ+AE QR AQQ+EE+AMR N + Q AILRLM ELQKVA Sbjct: 400 RQQAELQRQLAQQEEEKAMRVNHLTQTAILRLMTELQKVA 439 >ref|YP_001354643.1| PilJ twitching motility protein [Janthinobacterium sp. Marseille] gb|ABR90003.1| PilJ twitching motility protein [Janthinobacterium sp. Marseille] Length = 760 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 138/219 (63%), Positives = 168/219 (76%) Query: 2 LQSQGGNSPREAAAAAQLVLLTLRLGRSANEFLTSEGVNPETAFLLGKDVNTFRDIIDGF 61 L++QGG SPRE AAA QLV+LT RL RSANEFL+SEGVNPETAFLLGKD NTFR+I++GF Sbjct: 229 LKAQGGASPRETAAAGQLVMLTQRLARSANEFLSSEGVNPETAFLLGKDTNTFREIVEGF 288 Query: 62 LNGSEILGINAVRDKDVRDKLNELEKVFGEYQPLVANILGNLQNFIAAKQSEQLVFLENE 121 +NGSE L ++ + D RDKL EL+ F EYQ ++ ILGNLQNFI+AKQ+E+L+F ENE Sbjct: 289 INGSEALRLSKTTEPDTRDKLLELQANFNEYQKSISLILGNLQNFISAKQAEELIFKENE 348 Query: 122 TLKQHLTVLQNDYRQAQETRSWTFWIMLLSMGLALVCGVGISWVQLQSSRRNAEEAELRR 181 LKQ LT LQ YR Q++ + FW+MLLS+ AL+ GI+ V LQ SR +EA+ RR Sbjct: 349 ALKQRLTELQQSYRSEQDSLTLPFWLMLLSVLAALLSAAGIALVLLQDSRNRTKEADARR 408 Query: 182 QEAEAQRLHAQQQEERAMRTNAINQAAILRLMNELQKVA 220 EAE QRL AQ+QEE A + N NQAAILRLMNELQ+VA Sbjct: 409 LEAEGQRLEAQKQEEEAKQANDQNQAAILRLMNELQEVA 447