BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0036.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001354643.1| PilJ twitching motility protein [Janthinobac...   211   4e-53
ref|ZP_08274269.1| twitching motility protein PilJ [Oxalobactera...   209   1e-52
ref|YP_001100982.1| twitching motility transmembrane protein [He...   208   2e-52
ref|YP_004751453.1| twitching motility protein [Collimonas fungi...   201   4e-50
ref|YP_003777226.1| twitching motility transmembrane protein [He...   188   3e-46

>ref|YP_001354643.1| PilJ twitching motility protein [Janthinobacterium sp. Marseille]
 gb|ABR90003.1| PilJ twitching motility protein [Janthinobacterium sp. Marseille]
          Length = 760

 Score =  211 bits (536), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 108/134 (80%), Positives = 123/134 (91%)

Query: 1   MTSAGQIQARRIHDTGQSMLEMSIQITDVSISANKSADVARHSVVVAERGAKAVEDAVKG 60
           +  A Q Q+R I +TGQ++L+M++QITDVS SAN+SA+VAR SV  AE G++AVE+A+KG
Sbjct: 504 LLEASQKQSRDIQETGQAVLDMAVQITDVSKSANESAEVARQSVTAAEEGSRAVENAIKG 563

Query: 61  MNEIREQIQETSKRIKRLGESSQEIGEITELISDITDQTNVLALNAAIQAASAGEAGRGF 120
           MNEIREQIQETSKRIKRLGESSQEIGEITELISDIT+QTNVLALNAAIQAASAGEAGRGF
Sbjct: 564 MNEIREQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGF 623

Query: 121 SVVAEEVQRLAERS 134
           SVVAEEVQRLAERS
Sbjct: 624 SVVAEEVQRLAERS 637


>ref|ZP_08274269.1| twitching motility protein PilJ [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32260.1| twitching motility protein PilJ [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 675

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/134 (80%), Positives = 124/134 (92%)

Query: 1   MTSAGQIQARRIHDTGQSMLEMSIQITDVSISANKSADVARHSVVVAERGAKAVEDAVKG 60
           + +A Q Q+R I +TGQ++L+M++QITDVS SAN+SADVAR SV  A+ GA+AVE+A+KG
Sbjct: 419 LLTASQRQSREIRETGQAVLDMALQITDVSKSANESADVARQSVSAADEGAQAVENAIKG 478

Query: 61  MNEIREQIQETSKRIKRLGESSQEIGEITELISDITDQTNVLALNAAIQAASAGEAGRGF 120
           M+EIREQIQETSKRIKRLGESSQEIGEITELISDIT+QTNVLALNAAIQAASAGEAGRGF
Sbjct: 479 MHEIREQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGF 538

Query: 121 SVVAEEVQRLAERS 134
           SVVAEEVQRLAERS
Sbjct: 539 SVVAEEVQRLAERS 552


>ref|YP_001100982.1| twitching motility transmembrane protein [Herminiimonas
           arsenicoxydans]
 emb|CAL62861.1| Putative twitching motility transmembrane protein PilJ-like
           [Herminiimonas arsenicoxydans]
          Length = 757

 Score =  208 bits (529), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 107/134 (79%), Positives = 123/134 (91%)

Query: 1   MTSAGQIQARRIHDTGQSMLEMSIQITDVSISANKSADVARHSVVVAERGAKAVEDAVKG 60
           +  A   Q+R I +TGQ++LEM++QITDVS SA++SA+VAR SV  AE+G++AVE+A+KG
Sbjct: 501 LLEASHKQSRDIQETGQAVLEMAVQITDVSKSASESAEVARQSVTAAEQGSRAVENAIKG 560

Query: 61  MNEIREQIQETSKRIKRLGESSQEIGEITELISDITDQTNVLALNAAIQAASAGEAGRGF 120
           MNEIREQIQETSKRIKRLGESSQEIGEITELISDIT+QTNVLALNAAIQAASAGEAGRGF
Sbjct: 561 MNEIREQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGF 620

Query: 121 SVVAEEVQRLAERS 134
           SVVAEEVQRLAERS
Sbjct: 621 SVVAEEVQRLAERS 634


>ref|YP_004751453.1| twitching motility protein [Collimonas fungivorans Ter331]
 gb|AEK60630.1| twitching motility protein [Collimonas fungivorans Ter331]
          Length = 815

 Score =  201 bits (510), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/136 (77%), Positives = 121/136 (88%)

Query: 1   MTSAGQIQARRIHDTGQSMLEMSIQITDVSISANKSADVARHSVVVAERGAKAVEDAVKG 60
           + +A Q Q+R I +T Q++L+M+ QITDVS SA++SA+VAR SV  AE G+KAVE+A+ G
Sbjct: 559 LLAASQRQSRDIQETTQAVLDMATQITDVSKSASESAEVARQSVSAAEEGSKAVENAISG 618

Query: 61  MNEIREQIQETSKRIKRLGESSQEIGEITELISDITDQTNVLALNAAIQAASAGEAGRGF 120
           MNEIRE IQETSKRIKRLGESSQEIGEITELISDIT+QTNVLALNAAIQAASAGEAGRGF
Sbjct: 619 MNEIREHIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGF 678

Query: 121 SVVAEEVQRLAERSSA 136
           SVVAEEVQRLAERS A
Sbjct: 679 SVVAEEVQRLAERSGA 694


>ref|YP_003777226.1| twitching motility transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ65318.1| twitching motility transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 753

 Score =  188 bits (477), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 109/118 (92%)

Query: 19  MLEMSIQITDVSISANKSADVARHSVVVAERGAKAVEDAVKGMNEIREQIQETSKRIKRL 78
           MLEMS+QIT +S+SA++SADVARH+V+ AERG +AVE+A+K MN IREQIQETS RI RL
Sbjct: 514 MLEMSMQITGISVSADESADVARHAVLAAERGERAVENAIKAMNGIREQIQETSGRITRL 573

Query: 79  GESSQEIGEITELISDITDQTNVLALNAAIQAASAGEAGRGFSVVAEEVQRLAERSSA 136
           GESSQ IGEITELISDIT++TNVLALNAAIQAASAGEAGRGFSVVAEEVQ LAERSSA
Sbjct: 574 GESSQMIGEITELISDITERTNVLALNAAIQAASAGEAGRGFSVVAEEVQHLAERSSA 631