BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0024.p         (87 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751389.1| exodeoxyribonuclease VII small subunit [Coll...   130   5e-29
ref|ZP_08274829.1| Putative Exodeoxyribonuclease VII small subun...   115   3e-24
ref|YP_001098633.1| exodeoxyribonuclease VII small subunit [Herm...   115   3e-24
ref|YP_001352019.1| exodeoxyribonuclease VII small subunit [Jant...   113   8e-24
ref|YP_003777219.1| exodeoxyribonuclease VII small subunit [Herb...   107   5e-22

>ref|YP_004751389.1| exodeoxyribonuclease VII small subunit [Collimonas fungivorans
          Ter331]
 gb|AEK60566.1| Exodeoxyribonuclease VII small subunit [Collimonas fungivorans
          Ter331]
          Length = 87

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 69/76 (90%)

Query: 1  MPKNPVKVSQPASFEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVD 60
          MPKNP+  S PASFE+AM ELEQLV QMEAGELPLEASVAAYKRG+ELVKFC++QL+KVD
Sbjct: 1  MPKNPISTSSPASFEQAMAELEQLVAQMEAGELPLEASVAAYKRGSELVKFCALQLEKVD 60

Query: 61 SQVKVLEGDMLKPLLG 76
          SQVKVLEGDMLKP  G
Sbjct: 61 SQVKVLEGDMLKPFTG 76


>ref|ZP_08274829.1| Putative Exodeoxyribonuclease VII small subunit (Exonuclease VII
          small subunit) (XseB) [Oxalobacteraceae bacterium
          IMCC9480]
 gb|EGF31700.1| Putative Exodeoxyribonuclease VII small subunit (Exonuclease VII
          small subunit) (XseB) [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 93

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 63/74 (85%)

Query: 1  MPKNPVKVSQPASFEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVD 60
          M K       PASFE+AM EL +LV QMEAGELPLEASVAAYKRG+ELVKFC+VQLDKVD
Sbjct: 11 MSKKLPSADTPASFEDAMAELARLVAQMEAGELPLEASVAAYKRGSELVKFCAVQLDKVD 70

Query: 61 SQVKVLEGDMLKPL 74
          SQV+VLEGDMLKPL
Sbjct: 71 SQVRVLEGDMLKPL 84


>ref|YP_001098633.1| exodeoxyribonuclease VII small subunit [Herminiimonas
          arsenicoxydans]
 sp|A4G1W7.1|EX7S_HERAR RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName:
          Full=Exodeoxyribonuclease VII small subunit;
          Short=Exonuclease VII small subunit
 emb|CAL60504.1| Exodeoxyribonuclease VII small subunit (Exonuclease VII small
          subunit) (XseB) [Herminiimonas arsenicoxydans]
          Length = 84

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/74 (75%), Positives = 63/74 (85%)

Query: 1  MPKNPVKVSQPASFEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVD 60
          M K     + P+SFEEAM ELEQLV +MEAGELPLEASVAAYKRG+ELVK+C+ QL+KVD
Sbjct: 1  MSKKSTSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVD 60

Query: 61 SQVKVLEGDMLKPL 74
          SQVKVLEGDMLKP 
Sbjct: 61 SQVKVLEGDMLKPF 74


>ref|YP_001352019.1| exodeoxyribonuclease VII small subunit [Janthinobacterium sp.
          Marseille]
 sp|A6SUS2.1|EX7S_JANMA RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName:
          Full=Exodeoxyribonuclease VII small subunit;
          Short=Exonuclease VII small subunit
 gb|ABR91684.1| exodeoxyribonuclease VII small subunit [Janthinobacterium sp.
          Marseille]
          Length = 84

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/74 (74%), Positives = 63/74 (85%)

Query: 1  MPKNPVKVSQPASFEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVD 60
          M K     + P+SFEEAM ELEQLV +MEAGELPLEASVAAYKRG+ELVK+C+ QL+KVD
Sbjct: 1  MSKKSTSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVD 60

Query: 61 SQVKVLEGDMLKPL 74
          +QVKVLEGDMLKP 
Sbjct: 61 NQVKVLEGDMLKPF 74


>ref|YP_003777219.1| exodeoxyribonuclease VII small subunit [Herbaspirillum
          seropedicae SmR1]
 gb|ADJ65311.1| exodeoxyribonuclease VII small subunit protein [Herbaspirillum
          seropedicae SmR1]
          Length = 92

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 58/61 (95%)

Query: 14 FEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVDSQVKVLEGDMLKP 73
          FE+AM+ELEQLV QMEAGELPLEASVAAYKRG+ELVKFC+ QLDKVD+QVK+LEGDMLKP
Sbjct: 22 FEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVKFCAAQLDKVDTQVKLLEGDMLKP 81

Query: 74 L 74
           
Sbjct: 82 F 82