BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0019.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777214.1| transcription regulator protein [Herbaspiril... 484 e-135 ref|YP_001352024.1| transcriptional regulator [Janthinobacterium... 404 e-111 ref|YP_004751395.1| putative transcription regulator protein, Ly... 401 e-110 ref|ZP_08276174.1| putative transcription regulator protein, Lys... 400 e-110 ref|YP_001098638.1| LysR family transcriptional regulator [Hermi... 395 e-108 >ref|YP_003777214.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65306.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 296 Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust. Identities = 235/259 (90%), Positives = 248/259 (95%) Query: 1 MATRLPPVHALSAFEAAARHNSFAVAAEELCITPSALSHRIRLLEEFVGERLFFRDGRSI 60 MATRLPPVHALSAFEAAARHNSFA+AAEELCITPSALSHRIRLLEEFVGERLF+RDGRSI Sbjct: 1 MATRLPPVHALSAFEAAARHNSFAIAAEELCITPSALSHRIRLLEEFVGERLFYRDGRSI 60 Query: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNATVQPKVKIMLPPTFARHLLVPRIAEFTQRY 120 GLSEFGRRYLDVVRSALRTLTDFPMPHRNA VQPK+K+MLPPTFARHLL+PRIA+FTQR+ Sbjct: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNAAVQPKIKVMLPPTFARHLLMPRIADFTQRH 120 Query: 121 PDITVEMYLSVPLYDLSLSESDVEIRFGAGNYPNFVTEKLFEEPAFAVASPAYLKTIPPL 180 P+I VE+YLSVPLYDLSLSESDVEIRFGAGNYPN +TEKLFEEPAFAVASPAYLKT+PP+ Sbjct: 121 PEIVVELYLSVPLYDLSLSESDVEIRFGAGNYPNIITEKLFEEPAFAVASPAYLKTLPPM 180 Query: 181 KGPQDLLHANLLRSALEPWQPWFEAAGLKDWPEPSTGLRVDDLGLLLESVRHGYGVGLTR 240 K P DL A LLRSALEPWQPWFEAAGLKDW EPS GLRVDDLGLLLE+VRHGYGVGLTR Sbjct: 181 KSPADLKQATLLRSALEPWQPWFEAAGLKDWVEPSAGLRVDDLGLLLEAVRHGYGVGLTR 240 Query: 241 QHFAEELLARGEIVELFXI 259 QHFAEELLARGEIVELF I Sbjct: 241 QHFAEELLARGEIVELFDI 259 >ref|YP_001352024.1| transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR88650.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 298 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/260 (75%), Positives = 223/260 (85%), Gaps = 1/260 (0%) Query: 1 MATRLPPVHALSAFEAAARHNSFAVAAEELCITPSALSHRIRLLEEFVGERLFFRDGRSI 60 MA RLPPVHALSAFEAAARH SFA+AAEELCITPSA SHRIRLLEEFVGERLF RDGRS+ Sbjct: 1 MAIRLPPVHALSAFEAAARHGSFAIAAEELCITPSAFSHRIRLLEEFVGERLFLRDGRSV 60 Query: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNATVQPKVKIMLPPTFARHLLVPRIAEFTQRY 120 L+EFGRRYLDVVR ALR+L DFP+PHR+ QP+VKI +PPTFAR+L +P +A+FT Y Sbjct: 61 SLTEFGRRYLDVVRDALRSLADFPLPHRHPLAQPRVKITVPPTFARYLFLPHLADFTALY 120 Query: 121 PDITVEMYLSVPLYDLSLSESDVEIRFGAGNYPNFVTEKLFEEPAFAVASPAYLKTIPPL 180 PDIT+E++LSVPLYD++LSE+D+EIRFGAG YP+ TEKLFEEP F V SPAYL+ I L Sbjct: 121 PDITIEVFLSVPLYDMALSETDLEIRFGAGKYPDTTTEKLFEEPVFPVVSPAYLEKIGGL 180 Query: 181 KGPQDLLHANLLRSALEPWQPWFEAAGLKDWPEPSTGLRVDDLGLLLESVRHGYGVGLTR 240 K P DL A LLRSALEPWQ WFE AGL DWPEP+TGLR+DDLGLLLE+VRHGYGV LTR Sbjct: 181 KTPADLQKAQLLRSALEPWQAWFEVAGL-DWPEPATGLRIDDLGLLLEAVRHGYGVALTR 239 Query: 241 QHFAEELLARGEIVELFXIH 260 +HFAEE++A GE+V LF I Sbjct: 240 KHFAEEMIANGEVVPLFDIQ 259 >ref|YP_004751395.1| putative transcription regulator protein, LysR family [Collimonas fungivorans Ter331] gb|AEK60572.1| putative transcription regulator protein, LysR family [Collimonas fungivorans Ter331] Length = 305 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/259 (74%), Positives = 225/259 (86%), Gaps = 1/259 (0%) Query: 1 MATRLPPVHALSAFEAAARHNSFAVAAEELCITPSALSHRIRLLEEFVGERLFFRDGRSI 60 + RLPPVHALSAFEAAARH SFA+AA+ELCITPSALSHRIRLLE+FVGERLF R+GR++ Sbjct: 11 LVNRLPPVHALSAFEAAARHRSFALAADELCITPSALSHRIRLLEDFVGERLFSREGRTV 70 Query: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNATVQPKVKIMLPPTFARHLLVPRIAEFTQRY 120 LSEFG RYL+VVRSALRTLT+FP+P RNA VQP+VKI PPTFAR LL+P + F R+ Sbjct: 71 TLSEFGHRYLEVVRSALRTLTEFPLPQRNAQVQPRVKITAPPTFARQLLIPHLHGFASRH 130 Query: 121 PDITVEMYLSVPLYDLSLSESDVEIRFGAGNYPNFVTEKLFEEPAFAVASPAYLKTIPPL 180 P+I VE++LSVPLYDLSL+ESD+E+RFGAG YPN TEKLFEEP FAVASP YLK PL Sbjct: 131 PEIVVEIFLSVPLYDLSLTESDLEVRFGAGKYPNTTTEKLFEEPTFAVASPGYLKKAGPL 190 Query: 181 KGPQDLLHANLLRSALEPWQPWFEAAGLKDWPEPSTGLRVDDLGLLLESVRHGYGVGLTR 240 P DL A+LLRSALEPWQPWF+AAGL DWPEPS+GLR DDLGLLLE VRHG+GVGLTR Sbjct: 191 HQPADLCKASLLRSALEPWQPWFQAAGL-DWPEPSSGLRADDLGLLLELVRHGHGVGLTR 249 Query: 241 QHFAEELLARGEIVELFXI 259 +HFA++++A+GE+V+LF I Sbjct: 250 KHFAQQMIAQGEVVQLFDI 268 >ref|ZP_08276174.1| putative transcription regulator protein, LysR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF30357.1| putative transcription regulator protein, LysR family [Oxalobacteraceae bacterium IMCC9480] Length = 293 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 198/259 (76%), Positives = 222/259 (85%), Gaps = 1/259 (0%) Query: 1 MATRLPPVHALSAFEAAARHNSFAVAAEELCITPSALSHRIRLLEEFVGERLFFRDGRSI 60 MA+RLPPVHALSAFEAAAR SFA+AAEELCITPSALSHRIRLLE+FVGERLF RD RS+ Sbjct: 1 MASRLPPVHALSAFEAAARFLSFALAAEELCITPSALSHRIRLLEDFVGERLFIRDSRSV 60 Query: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNATVQPKVKIMLPPTFARHLLVPRIAEFTQRY 120 LS+FGRRYL+VVRSALR L DFPMPHR QP++KI +PPTFAR+LLVP++A+F + Sbjct: 61 ALSDFGRRYLEVVRSALRALNDFPMPHRGVPAQPRLKITVPPTFARYLLVPKLAQFMALH 120 Query: 121 PDITVEMYLSVPLYDLSLSESDVEIRFGAGNYPNFVTEKLFEEPAFAVASPAYLKTIPPL 180 P I VE++LSVPLYDLSLSESDVEIRFGAG Y N VT KLFEEPAFAVASPAYL +I + Sbjct: 121 PHIAVELFLSVPLYDLSLSESDVEIRFGAGKYANIVTRKLFEEPAFAVASPAYLASIGGI 180 Query: 181 KGPQDLLHANLLRSALEPWQPWFEAAGLKDWPEPSTGLRVDDLGLLLESVRHGYGVGLTR 240 P DL ANLLRSALEPWQPWFEAAGL DWPEP TGLRVDDLGLLLESV+HG+G+GLTR Sbjct: 181 ATPADLKKANLLRSALEPWQPWFEAAGL-DWPEPGTGLRVDDLGLLLESVKHGHGIGLTR 239 Query: 241 QHFAEELLARGEIVELFXI 259 QHF ++A GE+V LF I Sbjct: 240 QHFGAGMIATGEVVRLFDI 258 >ref|YP_001098638.1| LysR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL60509.1| putative transcription regulator protein, LysR family [Herminiimonas arsenicoxydans] Length = 299 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/260 (73%), Positives = 219/260 (84%), Gaps = 1/260 (0%) Query: 1 MATRLPPVHALSAFEAAARHNSFAVAAEELCITPSALSHRIRLLEEFVGERLFFRDGRSI 60 MA+RLPPVHALSAFEAAARH SFAVAAEELCITPSA SHRIRLLE+FVGERLF RDGRS+ Sbjct: 1 MASRLPPVHALSAFEAAARHGSFAVAAEELCITPSAFSHRIRLLEDFVGERLFLRDGRSV 60 Query: 61 GLSEFGRRYLDVVRSALRTLTDFPMPHRNATVQPKVKIMLPPTFARHLLVPRIAEFTQRY 120 L+EFGRRYLDVVR AL +L DFP+PHR A+ Q KVK+ +PPTFAR+L +P + EF + Sbjct: 61 SLTEFGRRYLDVVRGALSSLADFPLPHRYASTQLKVKVTVPPTFARYLFLPHLHEFMALH 120 Query: 121 PDITVEMYLSVPLYDLSLSESDVEIRFGAGNYPNFVTEKLFEEPAFAVASPAYLKTIPPL 180 P+I++E YLSVPLYD+SLSE+D+E+RFGAG YP+ VTEKLF EP F VASPAYL+ I L Sbjct: 121 PEISIETYLSVPLYDMSLSETDIEVRFGAGKYPDIVTEKLFREPVFPVASPAYLEQIGKL 180 Query: 181 KGPQDLLHANLLRSALEPWQPWFEAAGLKDWPEPSTGLRVDDLGLLLESVRHGYGVGLTR 240 P DL A LLRSALEPWQPWFE AGL DW EPSTGLR+DDLGLLLE+V+HGYGV LTR Sbjct: 181 NVPADLQKAQLLRSALEPWQPWFEMAGL-DWQEPSTGLRIDDLGLLLEAVKHGYGVALTR 239 Query: 241 QHFAEELLARGEIVELFXIH 260 QHFA +++A GEIV LF + Sbjct: 240 QHFAADMIASGEIVSLFDLQ 259