BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0018.p (426 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777213.1| glycolate oxidase (FAD-linked subunit) oxido... 791 0.0 ref|YP_004751396.1| glycolate dehydrogenase [Collimonas fungivor... 766 0.0 ref|ZP_08273207.1| Glycolate dehydrogenase [Oxalobacteraceae bac... 749 0.0 ref|YP_001352025.1| glycolate oxidase (fad-linked subunit) oxido... 741 0.0 ref|YP_001098640.1| glycolate oxidase subunit glcD [Herminiimona... 740 0.0 >ref|YP_003777213.1| glycolate oxidase (FAD-linked subunit) oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65305.1| glycolate oxidase (FAD-linked subunit) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 495 Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/415 (92%), Positives = 400/415 (96%) Query: 12 RRAGTGLSGGAMPIADGVVVSTAKFNKIVSMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 71 R AGTGLSGGA PIADGVVVSTAKFN+I+ MDKYSRTAVVQPGVRNLAISEAAAPHGLYY Sbjct: 81 RGAGTGLSGGATPIADGVVVSTAKFNQILQMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 140 Query: 72 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIEGDVIELGNAGLDAPGL 131 APDPSSQIAC+IGGNVAENSGGVHCLKYGLTVHNVLRVR+VTIEG+V+ELG+ LDAPGL Sbjct: 141 APDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNVLRVRMVTIEGEVVELGSGALDAPGL 200 Query: 132 DLLAVFIGSEGMLGIVTEVTVKLVPKPQQARVIMASFDDVVKGGNAVANVIAAGIIPAGL 191 DLLAVFIGSEGMLG+VTEVTVKLVPKPQ ARVIMASFDDVVKGGNAVANVIAAGIIPAGL Sbjct: 201 DLLAVFIGSEGMLGVVTEVTVKLVPKPQAARVIMASFDDVVKGGNAVANVIAAGIIPAGL 260 Query: 192 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTSEEVEEEIGRMSEVLNASGATAIAVS 251 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGT EEVEEEIGRM++VLNASGATAIA S Sbjct: 261 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTVEEVEEEIGRMTDVLNASGATAIACS 320 Query: 252 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLGIARMEGKYGLRCANV 311 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRK+LA+VLLGIA ME KYGLRCANV Sbjct: 321 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKKLAQVLLGIAEMEKKYGLRCANV 380 Query: 312 FHAGDGNLHPLILFDANQADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 371 FHAGDGNLHPLILFDAN ADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ Sbjct: 381 FHAGDGNLHPLILFDANIADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 440 Query: 372 YSPEEREAFFKVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGAIKFPDLPRF 426 +SP ERE FFK+KRAFD AFLLNPDKAIP+LHRCAEYGKMHVQRG ++FPDLPRF Sbjct: 441 FSPAERETFFKLKRAFDPAFLLNPDKAIPTLHRCAEYGKMHVQRGQLRFPDLPRF 495 >ref|YP_004751396.1| glycolate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK60573.1| Glycolate dehydrogenase [Collimonas fungivorans Ter331] Length = 499 Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/415 (89%), Positives = 389/415 (93%) Query: 12 RRAGTGLSGGAMPIADGVVVSTAKFNKIVSMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 71 R AGTGLSGGAMPIADGVV+STAKF +IV +D+Y+RTAVVQPGVRNLAISEAAA HGLYY Sbjct: 85 RGAGTGLSGGAMPIADGVVLSTAKFTRIVKLDQYARTAVVQPGVRNLAISEAAAAHGLYY 144 Query: 72 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIEGDVIELGNAGLDAPGL 131 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVR+VTIEG+V+ELGN LDAPGL Sbjct: 145 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRMVTIEGEVVELGNGALDAPGL 204 Query: 132 DLLAVFIGSEGMLGIVTEVTVKLVPKPQQARVIMASFDDVVKGGNAVANVIAAGIIPAGL 191 DLLAVFIGSEGMLG+VTEVTVKL+PKPQ ARVIMASFDDVVK GNAVANVIAAGIIPAGL Sbjct: 205 DLLAVFIGSEGMLGVVTEVTVKLIPKPQAARVIMASFDDVVKSGNAVANVIAAGIIPAGL 264 Query: 192 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTSEEVEEEIGRMSEVLNASGATAIAVS 251 EMMD+TSSRMVEPFVKAGYDIDA AILLCESDGT+EEVEEEIGRMS VLNASGAT I VS Sbjct: 265 EMMDRTSSRMVEPFVKAGYDIDAAAILLCESDGTAEEVEEEIGRMSAVLNASGATRIEVS 324 Query: 252 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLGIARMEGKYGLRCANV 311 SEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRK LA+VLLGI +ME KYGLRCANV Sbjct: 325 TSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKNLAQVLLGIEQMENKYGLRCANV 384 Query: 312 FHAGDGNLHPLILFDANQADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 371 FHAGDGNLHPLILFDAN EFHRAE FGAEILELCV VGGTITGEHGVGIEKINSMCVQ Sbjct: 385 FHAGDGNLHPLILFDANVPGEFHRAEEFGAEILELCVAVGGTITGEHGVGIEKINSMCVQ 444 Query: 372 YSPEEREAFFKVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGAIKFPDLPRF 426 +SP EREAFF VKRAFDTAFLLNPDKAIP+L RCAEYGKMHVQRG +KF +LPRF Sbjct: 445 FSPLEREAFFNVKRAFDTAFLLNPDKAIPTLQRCAEYGKMHVQRGQLKFAELPRF 499 >ref|ZP_08273207.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33326.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 495 Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/415 (86%), Positives = 387/415 (93%) Query: 12 RRAGTGLSGGAMPIADGVVVSTAKFNKIVSMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 71 R AGTGLSGGA PIADG+V+STAK N+I+ +D SRTAVVQPGVRNLAIS+AAAPH LYY Sbjct: 81 RGAGTGLSGGATPIADGLVLSTAKLNRIIKVDPVSRTAVVQPGVRNLAISDAAAPHNLYY 140 Query: 72 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIEGDVIELGNAGLDAPGL 131 APDPSSQIAC+IGGNVAENSGGVHCLKYGLTVHNV+RVR+VTI+GD++ELGN LDAPGL Sbjct: 141 APDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNVMRVRIVTIDGDIVELGNGALDAPGL 200 Query: 132 DLLAVFIGSEGMLGIVTEVTVKLVPKPQQARVIMASFDDVVKGGNAVANVIAAGIIPAGL 191 DLLAVFIGSEGMLGIVTEVTV+L+PKPQQA VIMASFDDVVKGGNAVA+VI AGIIPAGL Sbjct: 201 DLLAVFIGSEGMLGIVTEVTVRLIPKPQQACVIMASFDDVVKGGNAVADVIGAGIIPAGL 260 Query: 192 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTSEEVEEEIGRMSEVLNASGATAIAVS 251 EMMD+TSSRMVEPFVKAGYDIDA AILLCESDGT EEV+EEI RM+ +L ASGAT I+VS Sbjct: 261 EMMDRTSSRMVEPFVKAGYDIDAAAILLCESDGTPEEVQEEIARMTAILTASGATKISVS 320 Query: 252 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLGIARMEGKYGLRCANV 311 S+ ER+RFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLL I ME KYGLRCANV Sbjct: 321 GSDEERMRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLRIEAMEVKYGLRCANV 380 Query: 312 FHAGDGNLHPLILFDANQADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 371 FHAGDGNLHPLILFDAN+ EFH+AE FGAEILELCVEVGGTITGEHGVGIEKI+SMCVQ Sbjct: 381 FHAGDGNLHPLILFDANKPGEFHQAEAFGAEILELCVEVGGTITGEHGVGIEKIDSMCVQ 440 Query: 372 YSPEEREAFFKVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGAIKFPDLPRF 426 YSP+EREAFF VKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRG +KFPDLPRF Sbjct: 441 YSPQEREAFFAVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGQLKFPDLPRF 495 >ref|YP_001352025.1| glycolate oxidase (fad-linked subunit) oxidoreductase protein [Janthinobacterium sp. Marseille] gb|ABR88432.1| glycolate oxidase (fad-linked subunit) oxidoreductase protein [Janthinobacterium sp. Marseille] Length = 495 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/415 (86%), Positives = 385/415 (92%) Query: 12 RRAGTGLSGGAMPIADGVVVSTAKFNKIVSMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 71 R AGTGLSGGA+PIADG+V+STA+ NKIV +D Y+RTAVVQPGVRNLAISEA AP GLYY Sbjct: 81 RGAGTGLSGGALPIADGIVLSTARLNKIVKVDAYARTAVVQPGVRNLAISEAVAPLGLYY 140 Query: 72 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIEGDVIELGNAGLDAPGL 131 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNV+RVRVVTIEGDVIELGNA LDAPGL Sbjct: 141 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRVRVVTIEGDVIELGNAALDAPGL 200 Query: 132 DLLAVFIGSEGMLGIVTEVTVKLVPKPQQARVIMASFDDVVKGGNAVANVIAAGIIPAGL 191 DLL+VFIGSEGMLG+VTEVTVKL+PKP+ ARVI+ASFDDVVKGGNAVA+VIAAGIIPAGL Sbjct: 201 DLLSVFIGSEGMLGMVTEVTVKLIPKPKLARVILASFDDVVKGGNAVASVIAAGIIPAGL 260 Query: 192 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTSEEVEEEIGRMSEVLNASGATAIAVS 251 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDG EEV+EEI RM+EVL SGATAIAVS Sbjct: 261 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGIPEEVDEEIARMTEVLKHSGATAIAVS 320 Query: 252 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLGIARMEGKYGLRCANV 311 Q+EAERLRFWSGRKNAFPAAGRISPDYYC+DGTIPR+ LA+VLLGIA+ME KYGLRCANV Sbjct: 321 QNEAERLRFWSGRKNAFPAAGRISPDYYCIDGTIPRRSLADVLLGIAQMEVKYGLRCANV 380 Query: 312 FHAGDGNLHPLILFDANQADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 371 FHAGDGNLHPLILFDANQ EFHRAELFGAEILE+CV VGGTITGEHGVG+EKIN MCVQ Sbjct: 381 FHAGDGNLHPLILFDANQEGEFHRAELFGAEILEMCVAVGGTITGEHGVGLEKINQMCVQ 440 Query: 372 YSPEEREAFFKVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGAIKFPDLPRF 426 +S E +AF VKRAFD LLNP KAIP+L RCAEYGKMHV+RG +KFPDLPRF Sbjct: 441 FSRAEIDAFLAVKRAFDPVSLLNPTKAIPTLQRCAEYGKMHVKRGMLKFPDLPRF 495 >ref|YP_001098640.1| glycolate oxidase subunit glcD [Herminiimonas arsenicoxydans] Length = 512 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/415 (86%), Positives = 383/415 (92%) Query: 12 RRAGTGLSGGAMPIADGVVVSTAKFNKIVSMDKYSRTAVVQPGVRNLAISEAAAPHGLYY 71 R AGTGLSGGA+PIADG+V+STA+ NKIV +D Y+RTAVVQPGVRNLAISEA A GLYY Sbjct: 98 RGAGTGLSGGALPIADGIVLSTARLNKIVKVDAYARTAVVQPGVRNLAISEAVASLGLYY 157 Query: 72 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIEGDVIELGNAGLDAPGL 131 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNV+RVRVVTIEGDVIELGNA LDAPGL Sbjct: 158 APDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRVRVVTIEGDVIELGNAALDAPGL 217 Query: 132 DLLAVFIGSEGMLGIVTEVTVKLVPKPQQARVIMASFDDVVKGGNAVANVIAAGIIPAGL 191 DLL+VF+GSEGMLGIVTEVTVKL+PKP+ ARVI+ASFDDVVKGGNAVA+VIAAGIIPAGL Sbjct: 218 DLLSVFVGSEGMLGIVTEVTVKLIPKPKLARVILASFDDVVKGGNAVASVIAAGIIPAGL 277 Query: 192 EMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTSEEVEEEIGRMSEVLNASGATAIAVS 251 EMMDKTS+RMVEPFVKAGYDIDAEAILLCESDG EEVEEEI RM+EVL SGATAIAVS Sbjct: 278 EMMDKTSTRMVEPFVKAGYDIDAEAILLCESDGIPEEVEEEIARMTEVLKHSGATAIAVS 337 Query: 252 QSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKRLAEVLLGIARMEGKYGLRCANV 311 Q EAERL+FWSGRKNAFPAAGRISPDYYC+DGTIPR+RLAEVL GIA+ME KYGLRCANV Sbjct: 338 QDEAERLKFWSGRKNAFPAAGRISPDYYCIDGTIPRRRLAEVLQGIAQMEVKYGLRCANV 397 Query: 312 FHAGDGNLHPLILFDANQADEFHRAELFGAEILELCVEVGGTITGEHGVGIEKINSMCVQ 371 FHAGDGNLHPLILFDANQ EFHRAELFGAEILE+CV GGTITGEHGVG+EKIN MCVQ Sbjct: 398 FHAGDGNLHPLILFDANQEGEFHRAELFGAEILEMCVAFGGTITGEHGVGLEKINQMCVQ 457 Query: 372 YSPEEREAFFKVKRAFDTAFLLNPDKAIPSLHRCAEYGKMHVQRGAIKFPDLPRF 426 +S E +AF VKRAFD LLNPDKAIP+L RCAEYGKMHV+RG +KFPDLPRF Sbjct: 458 FSRAEMDAFLSVKRAFDPLSLLNPDKAIPTLQRCAEYGKMHVKRGMLKFPDLPRF 512