BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0015.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777209.1| hypothetical protein Hsero_3823 [Herbaspiril...   228   3e-58
ref|YP_003911153.1| hypothetical protein BC1003_5953 [Burkholder...   137   6e-31
ref|YP_001527454.1| hypothetical protein AZC_4538 [Azorhizobium ...   115   3e-24
ref|ZP_00959606.1| hypothetical protein ISM_07225 [Roseovarius n...   112   1e-23
ref|YP_002498316.1| hypothetical protein Mnod_3072 [Methylobacte...   109   1e-22

>ref|YP_003777209.1| hypothetical protein Hsero_3823 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65301.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 152

 Score =  228 bits (581), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/139 (80%), Positives = 120/139 (86%)

Query: 16  DNDIQVEEGTLGKLVMARLKPNQDLTESVEALCRQYGMQTAIVRGAIGSLIDAHLEYATP 75
           D+ I VE+G LGKLVMARLKPNQDLTESVEALCRQ+GM  AIVRGAIGSLIDAHL+YATP
Sbjct: 14  DDHIHVEQGQLGKLVMARLKPNQDLTESVEALCRQHGMDKAIVRGAIGSLIDAHLQYATP 73

Query: 76  TGSREMEINGPGVEILNVFGEIGFNGSKPHAHPLQGVVADVEGKIFAGRFVRGANLSFIT 135
           TG REME+NGPGVEILNVFGEIGF      AHPLQGVVAD EG+IFAGRFVRGANLSFIT
Sbjct: 74  TGLREMEVNGPGVEILNVFGEIGFADGPASAHPLQGVVADTEGRIFAGRFVRGANLSFIT 133

Query: 136 IEITLQEWIPKQAQQVLHA 154
           IEITLQEWI  +  + L A
Sbjct: 134 IEITLQEWIAVKQSEPLPA 152


>ref|YP_003911153.1| hypothetical protein BC1003_5953 [Burkholderia sp. CCGE1003]
 gb|ADN61862.1| protein of unknown function DUF296 [Burkholderia sp. CCGE1003]
          Length = 159

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 3/134 (2%)

Query: 18  DIQVEEGTLGKLVMARLKPNQDLTESVEALCRQYGMQTAIVRGAIGSLIDAHLEYATPTG 77
           D+++E G  G+ V+ARLKPN+D+ E++E LC QYG+  A+VR A+GSLID HL       
Sbjct: 20  DVRLEAGHYGRTVIARLKPNEDIVEALERLCGQYGIGRAVVRSAVGSLIDGHLASGAGAA 79

Query: 78  SREMEINGPGVEILNVFGEIG---FNGSKPHAHPLQGVVADVEGKIFAGRFVRGANLSFI 134
           S    + GPGVEI+ +FGE+     +G    A  L  +++  + ++FAGR VRG NLSFI
Sbjct: 80  STVQVVKGPGVEIVGLFGEVSGVPVDGRALGASGLTAILSGTDSQVFAGRVVRGMNLSFI 139

Query: 135 TIEITLQEWIPKQA 148
           T+E+TLQEWIP  A
Sbjct: 140 TVEVTLQEWIPDAA 153


>ref|YP_001527454.1| hypothetical protein AZC_4538 [Azorhizobium caulinodans ORS 571]
 dbj|BAF90536.1| hypothetical protein AZC_4538 [Azorhizobium caulinodans ORS 571]
          Length = 141

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 4/123 (3%)

Query: 22  EEGTLGKLVMARLKPNQDLTESVEALCRQYGMQTAIVRGAIGSLIDAHLEYATPTGSREM 81
           E G  G+++ AR++PN+DL  ++E LC Q+G   A+VRG++GSL    LE  T TG+R +
Sbjct: 17  ESGRTGRILYARVRPNEDLVHTIEKLCLQHGFSDAVVRGSLGSLSQCCLE--THTGAR-I 73

Query: 82  EINGPGVEILNVFGEIGFNGSKPHAHPLQGVVADVEGKIFAGRFVRGANLSFITIEITLQ 141
           E+ GP VE+L + GE+  NG    A  L G VAD +G+IFAGRF  G N   IT EITL+
Sbjct: 74  EVPGPAVEMLTLMGEVRSNGGALEAR-LSGTVADPQGRIFAGRFAAGRNPVCITFEITLE 132

Query: 142 EWI 144
           EW+
Sbjct: 133 EWL 135


>ref|ZP_00959606.1| hypothetical protein ISM_07225 [Roseovarius nubinhibens ISM]
 gb|EAP78068.1| hypothetical protein ISM_07225 [Roseovarius nubinhibens ISM]
          Length = 131

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 2/129 (1%)

Query: 21  VEEGTLGKLVMARLKPNQDLTESVEALCRQYGMQTAIVRGAIGSLIDAHLEYATPTGSRE 80
           VE G +G++  AR+ PN+DL + +E  C   G++ A VRGA+GSL+DA L   T +    
Sbjct: 4   VEHGAMGRVAYARIAPNEDLVQGIEKTCLAEGIRNAFVRGALGSLVDATL--VTKSDGTR 61

Query: 81  MEINGPGVEILNVFGEIGFNGSKPHAHPLQGVVADVEGKIFAGRFVRGANLSFITIEITL 140
           + +NGP VE++++ GE+        A  L GVVAD +G++F G FV G N   +T E+TL
Sbjct: 62  VLVNGPAVEVVSIAGEVRAGPDNTIAAALSGVVADTDGQVFGGFFVPGGNTVCMTFEVTL 121

Query: 141 QEWIPKQAQ 149
           +EW+P  A 
Sbjct: 122 EEWLPADAS 130


>ref|YP_002498316.1| hypothetical protein Mnod_3072 [Methylobacterium nodulans ORS 2060]
 gb|ACL58013.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 130

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 3/130 (2%)

Query: 17  NDIQVEEGTLGKLVMARLKPNQDLTESVEALCRQYGMQTAIVRGAIGSLIDAHLEYATPT 76
           + I VE+G++G++  AR+ PN+DL   VE +C   G + A VRGA+GSL+DA L   T +
Sbjct: 3   DTIVVEKGSMGRVAYARIGPNEDLVLGVEKMCLAEGFRNAFVRGALGSLVDACL--GTLS 60

Query: 77  GSREMEINGPGVEILNVFGEIGFNGSKPHAHPLQGVVADVEGKIFAGRFVRGANLSFITI 136
           G   +EI GP VEI+++ GE+           L GVVAD +G ++ G FV GAN   +T 
Sbjct: 61  GEY-IEIKGPAVEIVSLAGEVRSTSDGSLRAALTGVVADTDGNVYGGPFVAGANPICMTF 119

Query: 137 EITLQEWIPK 146
           E+TL+EW+P 
Sbjct: 120 EVTLEEWLPS 129