BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0048.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002007250.1| transcriptional regulator IclR family [Cupri... 363 9e-99 ref|YP_004680885.1| IclR family transcriptional regulator [Cupri... 363 1e-98 ref|YP_728895.1| IclR family transcriptional regulator [Ralstoni... 361 5e-98 ref|YP_001893023.1| IclR family transcriptional regulator [Ralst... 361 5e-98 ref|ZP_07674479.1| transcriptional regulator, IclR family [Ralst... 360 1e-97 >ref|YP_002007250.1| transcriptional regulator IclR family [Cupriavidus taiwanensis LMG 19424] emb|CAQ71189.1| putative transcriptional regulator, IclR family [Cupriavidus taiwanensis LMG 19424] Length = 283 Score = 363 bits (933), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 181/232 (78%), Positives = 205/232 (88%), Gaps = 2/232 (0%) Query: 1 VPRSTVFRLLTTLERMGFVERNDGGRDYRLGMAVLRLGFEYLASLELTEIGRPLLDRLRD 60 VPRSTVFRLL TLE +GFVER DGGRD+RLGMAVLRLGFEYLASLELTE+GRPLL+RLRD Sbjct: 52 VPRSTVFRLLATLEMLGFVERADGGRDFRLGMAVLRLGFEYLASLELTELGRPLLERLRD 111 Query: 61 EIGYSCNLVVRDGRSIVYVAKSVTQTAFASHVNVGTRLPAHATVLGRVLLEDLTLAELRD 120 EIGY NLVVRDGRSIVYVAK+V+ FAS VNVGTRLPAHATVLGRVLLEDL+LAELR Sbjct: 112 EIGYPTNLVVRDGRSIVYVAKAVSPRPFASSVNVGTRLPAHATVLGRVLLEDLSLAELRA 171 Query: 121 LYPEEHLEVFSSNTPKTVVELFDMVQNDKQRGYVLQEGFFETSISTIAAPVRDLSGKVVA 180 LYPE LEVFS +TP+T LF +VQ D++RGYVLQEGFFE+SISTIAAPVRD +GKVVA Sbjct: 172 LYPEAQLEVFSDSTPRTADALFAIVQRDRERGYVLQEGFFESSISTIAAPVRDRTGKVVA 231 Query: 181 AMGATIPSPHIDTDQLDLIVAKVRDTAGELSRLLDHAPA--KSGKVVNMWRE 230 A+GATIP+ HID +QLD +V KVR+TAGELSRLLD+ P+ +GKVVN++RE Sbjct: 232 ALGATIPAAHIDPEQLDAMVEKVRNTAGELSRLLDYRPSLHSAGKVVNLYRE 283 >ref|YP_004680885.1| IclR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI79653.1| transcriptional regulator IclR family [Cupriavidus necator N-1] Length = 297 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 182/233 (78%), Positives = 203/233 (87%), Gaps = 3/233 (1%) Query: 1 VPRSTVFRLLTTLERMGFVERNDGGRDYRLGMAVLRLGFEYLASLELTEIGRPLLDRLRD 60 VPRSTVFRLL TLE +GFVER DGGRD+RLGMAVLRLGFEYLASLELTE+GRPLL+RLRD Sbjct: 65 VPRSTVFRLLATLEMLGFVERADGGRDFRLGMAVLRLGFEYLASLELTELGRPLLERLRD 124 Query: 61 EIGYSCNLVVRDGRSIVYVAKSVTQTAFASHVNVGTRLPAHATVLGRVLLEDLTLAELRD 120 EIGY NLVVRDGRSIVYVAK+V+ FAS VNVGTRLPAHATVLGRVLLEDL+LAELR Sbjct: 125 EIGYPSNLVVRDGRSIVYVAKAVSPRPFASSVNVGTRLPAHATVLGRVLLEDLSLAELRT 184 Query: 121 LYPEEHLEVFSSNTPKTVVELFDMVQNDKQRGYVLQEGFFETSISTIAAPVRDLSGKVVA 180 LYPE HL VFS +TP+TV EL ++VQ D++RGYVLQEGFFE SISTIAAPVRD +GKVVA Sbjct: 185 LYPETHLAVFSESTPRTVDELHEIVQRDRERGYVLQEGFFEASISTIAAPVRDRTGKVVA 244 Query: 181 AMGATIPSPHIDTDQLDLIVAKVRDTAGELSRLLDHAP---AKSGKVVNMWRE 230 A+GATIP+ HID QLD +V KVRDTAGELSRLLD+ P + KVVN++RE Sbjct: 245 ALGATIPAAHIDPAQLDAMVEKVRDTAGELSRLLDYRPSLHSSGAKVVNLYRE 297 >ref|YP_728895.1| IclR family transcriptional regulator [Ralstonia eutropha H16] emb|CAJ95530.1| transcriptional regulator, IclR-family [Ralstonia eutropha H16] Length = 297 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 181/233 (77%), Positives = 202/233 (86%), Gaps = 3/233 (1%) Query: 1 VPRSTVFRLLTTLERMGFVERNDGGRDYRLGMAVLRLGFEYLASLELTEIGRPLLDRLRD 60 VPRSTVFRLL TLE +GFVER DGGRD+RLGMAVLRLGFEYLASLELTE+GRPLL+RLRD Sbjct: 65 VPRSTVFRLLATLEMLGFVERADGGRDFRLGMAVLRLGFEYLASLELTELGRPLLERLRD 124 Query: 61 EIGYSCNLVVRDGRSIVYVAKSVTQTAFASHVNVGTRLPAHATVLGRVLLEDLTLAELRD 120 EIGY NLVVRDGRSIVYVAK+V+ FAS VNVGTRLPAHATVLGRVLLEDL+LAELR Sbjct: 125 EIGYPSNLVVRDGRSIVYVAKAVSPRPFASSVNVGTRLPAHATVLGRVLLEDLSLAELRT 184 Query: 121 LYPEEHLEVFSSNTPKTVVELFDMVQNDKQRGYVLQEGFFETSISTIAAPVRDLSGKVVA 180 LYPE L VFS +TP+TV EL ++VQ D++RGYVLQEGFFE SISTIAAPVRD +GKVVA Sbjct: 185 LYPETQLAVFSESTPRTVDELHEIVQRDRERGYVLQEGFFEASISTIAAPVRDRTGKVVA 244 Query: 181 AMGATIPSPHIDTDQLDLIVAKVRDTAGELSRLLDHAP---AKSGKVVNMWRE 230 A+GATIP+ HID QLD +V KVRDTAGELSRLLD+ P + KVVN++RE Sbjct: 245 ALGATIPAAHIDPAQLDAMVEKVRDTAGELSRLLDYRPSLRSSGAKVVNLYRE 297 >ref|YP_001893023.1| IclR family transcriptional regulator [Ralstonia pickettii 12J] ref|YP_002984549.1| IclR family transcriptional regulator [Ralstonia pickettii 12D] gb|ACD29596.1| transcriptional regulator, IclR family [Ralstonia pickettii 12J] gb|ACS65877.1| transcriptional regulator, IclR family [Ralstonia pickettii 12D] Length = 275 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 182/230 (79%), Positives = 200/230 (86%), Gaps = 1/230 (0%) Query: 1 VPRSTVFRLLTTLERMGFVERNDGGRDYRLGMAVLRLGFEYLASLELTEIGRPLLDRLRD 60 VPRSTVFRLLTTLE MGF+ER DGGRD+RLGMAVLRLGFEYLASLELTE+GRPLLDRLRD Sbjct: 47 VPRSTVFRLLTTLEVMGFIERVDGGRDFRLGMAVLRLGFEYLASLELTELGRPLLDRLRD 106 Query: 61 EIGYSCNLVVRDGRSIVYVAKSVTQTAFASHVNVGTRLPAHATVLGRVLLEDLTLAELRD 120 EI Y CNLVVRDGRSIVYVAKSV T F S VNVGTRLPAHATVLGRVLL DL+LAELR Sbjct: 107 EIHYPCNLVVRDGRSIVYVAKSVAPTPFTSSVNVGTRLPAHATVLGRVLLADLSLAELRQ 166 Query: 121 LYPEEHLEVFSSNTPKTVVELFDMVQNDKQRGYVLQEGFFETSISTIAAPVRDLSGKVVA 180 LYPE LEVFS+NTP+TV ELF+MVQ D++ GYVLQEGFFE +ISTIAAPV D +GKVVA Sbjct: 167 LYPEPQLEVFSANTPRTVEELFEMVQRDREHGYVLQEGFFEANISTIAAPVLDRAGKVVA 226 Query: 181 AMGATIPSPHIDTDQLDLIVAKVRDTAGELSRLLDHAPAKSGKVVNMWRE 230 A+G TIPSP I+ QLDL++ KVR AGELS LLD+ PA GKVVN++RE Sbjct: 227 ALGTTIPSPRIEAAQLDLMIDKVRAAAGELSYLLDYRPA-GGKVVNLFRE 275 >ref|ZP_07674479.1| transcriptional regulator, IclR family [Ralstonia sp. 5_7_47FAA] gb|EFP67159.1| transcriptional regulator, IclR family [Ralstonia sp. 5_7_47FAA] Length = 275 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 182/230 (79%), Positives = 200/230 (86%), Gaps = 1/230 (0%) Query: 1 VPRSTVFRLLTTLERMGFVERNDGGRDYRLGMAVLRLGFEYLASLELTEIGRPLLDRLRD 60 VPRSTVFRLLTTLE MGF+ER DGGRD+RLGMAVLRLGFEYLASLELTE+GRPLLDRLRD Sbjct: 47 VPRSTVFRLLTTLEVMGFIERVDGGRDFRLGMAVLRLGFEYLASLELTELGRPLLDRLRD 106 Query: 61 EIGYSCNLVVRDGRSIVYVAKSVTQTAFASHVNVGTRLPAHATVLGRVLLEDLTLAELRD 120 +I Y CNLVVRDGRSIVYVAKSV T F S VNVGTRLPAHATVLGRVLL DL+LAELR Sbjct: 107 DIHYPCNLVVRDGRSIVYVAKSVAPTPFTSSVNVGTRLPAHATVLGRVLLADLSLAELRQ 166 Query: 121 LYPEEHLEVFSSNTPKTVVELFDMVQNDKQRGYVLQEGFFETSISTIAAPVRDLSGKVVA 180 LYPE LEVFS+NTP+TV ELF MVQ D++ GYVLQEGFFE +ISTIAAPV D +GKVVA Sbjct: 167 LYPEPQLEVFSANTPRTVEELFVMVQRDREHGYVLQEGFFEANISTIAAPVLDRAGKVVA 226 Query: 181 AMGATIPSPHIDTDQLDLIVAKVRDTAGELSRLLDHAPAKSGKVVNMWRE 230 A+G TIPSP I+ QLDL++ KVR AGELS LLD+ PA SGKVVN++RE Sbjct: 227 ALGTTIPSPRIEAAQLDLMIDKVRAAAGELSYLLDYRPA-SGKVVNLFRE 275