BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0041.p (339 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_252203.1| hypothetical protein PA3513 [Pseudomonas aerugi... 407 e-111 gb|AAT51495.1| PA3513 [synthetic construct] 407 e-111 ref|YP_673380.1| putative sulfonate transport system substrate-b... 234 2e-59 ref|ZP_08858595.1| hypothetical protein HMPREF9022_04252 [Erysip... 109 6e-22 ref|ZP_07831407.1| NMT1/THI5-like protein [Clostridium sp. HGF2]... 109 7e-22 >ref|NP_252203.1| hypothetical protein PA3513 [Pseudomonas aeruginosa PAO1] gb|AAG06901.1|AE004771_10 hypothetical protein PA3513 [Pseudomonas aeruginosa PAO1] Length = 335 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/330 (62%), Positives = 262/330 (79%), Gaps = 7/330 (2%) Query: 10 SKLVLSAAVATTLAVTVAAALVPGIAHAAPEEVTYLLPAPPNSPAFAPWVLAQHKGYYAD 69 SK +L+AA+ L AA L AAP EVTYLLPAPPNSPAFAPWV+A+ KGYYAD Sbjct: 2 SKSLLNAALCGAL---FAAGLT---VQAAPREVTYLLPAPPNSPAFAPWVIAREKGYYAD 55 Query: 70 ENLKINFIVAKGGVDVAKQIGAGNAVIGGAIGDTPIVVRANGIPVKAIAVLGAGSITMVA 129 LK+ F+ KGGVDVAKQIGAGNA +GGAIGDTPIVVRANGIPVKA+AVLGAG +TM+A Sbjct: 56 LGLKVTFVAGKGGVDVAKQIGAGNAPVGGAIGDTPIVVRANGIPVKAVAVLGAGGVTMIA 115 Query: 130 ANAGENIKSLKDLKGKTVTVMSYTDTTYYAFLGSLKTAGLSKTDLQIQAAGPAGVWQVFT 189 + I S+KDLKGKT+TVMSY+DTTYYA L S++ AGL K+D+ IQAAGP+GVWQ+F+ Sbjct: 116 TDGTAGIDSVKDLKGKTLTVMSYSDTTYYALLASMRKAGLGKSDVDIQAAGPSGVWQLFS 175 Query: 190 AGKASAFAGVPDWVVNSTDAGAKVELLDNGG-FKSMAQAILASDDTIKNKPELLKRLVRA 248 AG++ A AGVPDWVV++ DAG +V+LL F+SMAQAILASD+ I+ +PE++ +VRA Sbjct: 176 AGRSQAMAGVPDWVVSAEDAGRQVKLLPGSEVFESMAQAILASDEAIEKQPEVVGGVVRA 235 Query: 249 TLRGMQDIMKDPKAAATDYVAALPAYKGKEASIEATFEMYRKYVYAGQKTLGQIDAARMD 308 TL GM+DI+ DP+ AA + AA+PAYKG+EAS+E +Y ++VYA Q+ LG ID R+D Sbjct: 236 TLMGMRDIIADPRQAAATFAAAVPAYKGREASLERVLRLYVEHVYANQQPLGHIDPQRLD 295 Query: 309 SVQKFYVSEGIVTKATPVNELFTNQFVGTA 338 V++FYVSEGIV + TP++EL+TN+FV +A Sbjct: 296 KVRRFYVSEGIVGRETPLDELYTNRFVESA 325 >gb|AAT51495.1| PA3513 [synthetic construct] Length = 336 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/330 (62%), Positives = 262/330 (79%), Gaps = 7/330 (2%) Query: 10 SKLVLSAAVATTLAVTVAAALVPGIAHAAPEEVTYLLPAPPNSPAFAPWVLAQHKGYYAD 69 SK +L+AA+ L AA L AAP EVTYLLPAPPNSPAFAPWV+A+ KGYYAD Sbjct: 2 SKSLLNAALCGAL---FAAGLT---VQAAPREVTYLLPAPPNSPAFAPWVIAREKGYYAD 55 Query: 70 ENLKINFIVAKGGVDVAKQIGAGNAVIGGAIGDTPIVVRANGIPVKAIAVLGAGSITMVA 129 LK+ F+ KGGVDVAKQIGAGNA +GGAIGDTPIVVRANGIPVKA+AVLGAG +TM+A Sbjct: 56 LGLKVTFVAGKGGVDVAKQIGAGNAPVGGAIGDTPIVVRANGIPVKAVAVLGAGGVTMIA 115 Query: 130 ANAGENIKSLKDLKGKTVTVMSYTDTTYYAFLGSLKTAGLSKTDLQIQAAGPAGVWQVFT 189 + I S+KDLKGKT+TVMSY+DTTYYA L S++ AGL K+D+ IQAAGP+GVWQ+F+ Sbjct: 116 TDGTAGIDSVKDLKGKTLTVMSYSDTTYYALLASMRKAGLGKSDVDIQAAGPSGVWQLFS 175 Query: 190 AGKASAFAGVPDWVVNSTDAGAKVELLDNGG-FKSMAQAILASDDTIKNKPELLKRLVRA 248 AG++ A AGVPDWVV++ DAG +V+LL F+SMAQAILASD+ I+ +PE++ +VRA Sbjct: 176 AGRSQAMAGVPDWVVSAEDAGRQVKLLPGSEVFESMAQAILASDEAIEKQPEVVGGVVRA 235 Query: 249 TLRGMQDIMKDPKAAATDYVAALPAYKGKEASIEATFEMYRKYVYAGQKTLGQIDAARMD 308 TL GM+DI+ DP+ AA + AA+PAYKG+EAS+E +Y ++VYA Q+ LG ID R+D Sbjct: 236 TLMGMRDIIADPRQAAATFAAAVPAYKGREASLERVLRLYVEHVYANQQPLGHIDPQRLD 295 Query: 309 SVQKFYVSEGIVTKATPVNELFTNQFVGTA 338 V++FYVSEGIV + TP++EL+TN+FV +A Sbjct: 296 KVRRFYVSEGIVGRETPLDELYTNRFVESA 325 >ref|YP_673380.1| putative sulfonate transport system substrate-binding protein [Mesorhizobium sp. BNC1] gb|ABG62215.1| putative sulfonate transport system substrate-binding protein [Chelativorans sp. BNC1] Length = 326 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 3/299 (1%) Query: 40 EEVTYLLPAPPNSPAFAPWVLAQHKGYYADENLKINFIVAKGGVDVAKQIGAGNAVIGGA 99 E +TYL PAP PAFAP+ LA HKGYY +E L + F V +GG DVA Q+ GN +GG Sbjct: 25 ENLTYLFPAPDFLPAFAPFQLAYHKGYYEEEGLNVEFRVGQGGADVATQVAVGNVDMGGG 84 Query: 100 IGDTPIVVRANGIPVKAIAVLGAGSITMVAANAGENIKSLKDLKGKTVTVMSYTDTTYYA 159 +GDT ++VR NG+ V+ +A+LG +T +A I+S+ DL+G+++ V ++ DT YY Sbjct: 85 MGDTAMIVRPNGLEVRGVALLGGRGLTHIAWRNDSGIESVADLEGQSIAVTTFQDTAYYN 144 Query: 160 FLGSLKTAGLSKTDLQIQAAGPAGVWQVFTAGKASAFAGVPDWVVNSTDAGAKVELLD-N 218 L L G+ + + IQA G G+ Q AG A +GVP+W+V+ DAG + ++ + Sbjct: 145 LLAVLAGEGIDRPEADIQALGSGGLIQAMIAGSVQAMSGVPEWIVSIQDAGVDLTVMPVS 204 Query: 219 GGFKSMAQAILASDDTIKNKPELLKRLVRATLRGMQDIMKDPKAAATDYVAALPAYKGKE 278 F + QAI+ASD I PE VRATLR + DI+ DP AA +YV + + Sbjct: 205 ELFPAQPQAIIASDQFIAEHPERAAGFVRATLRAIDDIVADPALAAQEYVGFIDQHAENV 264 Query: 279 ASIEATFEMYRKYVYAGQKTL--GQIDAARMDSVQKFYVSEGIVTKATPVNELFTNQFV 335 IE Y + VY L G + ++ +Q FY++ I+T A P+ +++TNQFV Sbjct: 265 DQIERILRFYVESVYVEMDGLPRGAFNEGQLLEIQDFYLANDIITSAVPIQDVYTNQFV 323 >ref|ZP_08858595.1| hypothetical protein HMPREF9022_04252 [Erysipelotrichaceae bacterium 2_2_44A] gb|EGX71418.1| hypothetical protein HMPREF9022_04252 [Erysipelotrichaceae bacterium 2_2_44A] Length = 335 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 4/209 (1%) Query: 52 SPAFAPWVLAQHKGYYADENLKINFIVAKGGVDVAKQIGAGNAVIGGAIGDTPIVVRANG 111 +P +AP LAQ KGY+ +E L++NF A ++ K +GAGN G DT ++ R NG Sbjct: 43 TPYYAPLYLAQEKGYFKEEGLQVNFYYASAA-EIVKNVGAGNVPFGFPNADTVLLGRGNG 101 Query: 112 IPVKAIAVLGAGSITMVAANAGENIKSLKDLKGKTVTVMSYTDTTYYAFLGSLKTAGLSK 171 +PV I + + + I ++DLKGKT+ + SY Y L+ GLS Sbjct: 102 VPVNIIHTTYQKGLGAIIYKSESGIHKIQDLKGKTIAITSYGSPNYIQLKVILQQNGLSI 161 Query: 172 TDLQIQAAGPAGVWQVFTAGKASA--FAGVPDWVVNSTDAGAKVELLDNGGFKSMAQAIL 229 D+QI+ G + + + A F+ + + + S+ K + L N S ++ Sbjct: 162 HDVQIKVIGTGAIVNALVSNQVDAICFSKLRTYELQSSGIDVK-QFLSNDYMPSYGNVVI 220 Query: 230 ASDDTIKNKPELLKRLVRATLRGMQDIMK 258 S +K PE+ + A RGMQDI++ Sbjct: 221 TSQTFLKEHPEICRGFTNALNRGMQDIIE 249 >ref|ZP_07831407.1| NMT1/THI5-like protein [Clostridium sp. HGF2] gb|EFR39028.1| NMT1/THI5-like protein [Clostridium sp. HGF2] Length = 335 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 4/209 (1%) Query: 52 SPAFAPWVLAQHKGYYADENLKINFIVAKGGVDVAKQIGAGNAVIGGAIGDTPIVVRANG 111 +P +AP LAQ KGY+ +E L++NF A ++ K +GAGN G DT ++ R NG Sbjct: 43 TPYYAPLYLAQEKGYFKEEGLQVNFYYASAA-EIVKNVGAGNVPFGFPNADTVLLGRGNG 101 Query: 112 IPVKAIAVLGAGSITMVAANAGENIKSLKDLKGKTVTVMSYTDTTYYAFLGSLKTAGLSK 171 +PV I + + + I ++DLKGKT+ + SY Y L+ GLS Sbjct: 102 VPVNIIHTTYQKGLGAIIYKSESGIHKIQDLKGKTIAITSYGSPNYIQLKVILQQNGLSI 161 Query: 172 TDLQIQAAGPAGVWQVFTAGKASA--FAGVPDWVVNSTDAGAKVELLDNGGFKSMAQAIL 229 D+QI+ G + + + A F+ + + + S+ K + L N S ++ Sbjct: 162 HDVQIKVIGTGAIVNALVSNQVDAICFSKLRTYELQSSGIDVK-QFLSNDYMPSYGNVVI 220 Query: 230 ASDDTIKNKPELLKRLVRATLRGMQDIMK 258 S +K PE+ + A RGMQDI++ Sbjct: 221 TSQTFLKEHPEICRGFTNALNRGMQDIIE 249