BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0033.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753346.1| polar amino acid ABC transporter inner membr... 350 9e-95 gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syr... 308 4e-82 ref|YP_001523733.1| ABC transporter permease [Azorhizobium cauli... 290 1e-76 ref|YP_002947449.1| polar amino acid ABC transporter, inner memb... 287 6e-76 ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP bi... 285 3e-75 >ref|YP_004753346.1| polar amino acid ABC transporter inner membrane subunit [Collimonas fungivorans Ter331] gb|AEK62523.1| polar amino acid ABC transporter, inner membrane subunit [Collimonas fungivorans Ter331] Length = 222 Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 167/222 (75%), Positives = 195/222 (87%) Query: 1 MYHWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYV 60 MY WDF LWQ+RN+I GFGYT+ YTV V+LGLL+GL GL RLS +SGP RAYV Sbjct: 1 MYQWDFHTLWQYRNIILTGFGYTVGYTVIVVILGLLVGLIAGLCRLSPKVYISGPFRAYV 60 Query: 61 EVFRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQ 120 E+FRCTPVLVQL+WFYYALP+L GIE++ G +A+L+L LYGGAFYSEIIRGG++SID GQ Sbjct: 61 ELFRCTPVLVQLIWFYYALPILTGIELTPGMAAVLSLTLYGGAFYSEIIRGGVISIDPGQ 120 Query: 121 SEAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII 180 SEAG ALGMT+FQLMRRV+LPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII Sbjct: 121 SEAGMALGMTQFQLMRRVVLPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII 180 Query: 181 AHETYRPLEIYTMVAVIYFLILLPATIWAKRLENRLTAQQGA 222 AH+TYRPLEIY+++A++YF ILLPATI AKRLE +++ +GA Sbjct: 181 AHDTYRPLEIYSLIAILYFAILLPATILAKRLEVKVSDGRGA 222 >gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 223 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 146/215 (67%), Positives = 181/215 (84%) Query: 1 MYHWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYV 60 +YHWDF +L Q++ ++ G YTL TVAC +LG+L+G+ L RLS N ++ P RAYV Sbjct: 3 VYHWDFLSLLQYKQLLITGLWYTLGTTVACTILGMLVGILTALPRLSNNKVLCAPFRAYV 62 Query: 61 EVFRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQ 120 E+FRCTPVLVQLVWFYYALPV+ G+++ A T+ALL L+LYGGAFYSEI RGGI+SID GQ Sbjct: 63 EIFRCTPVLVQLVWFYYALPVVTGMQIGAMTAALLCLSLYGGAFYSEIFRGGIMSIDEGQ 122 Query: 121 SEAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII 180 SEA ALGM RFQ+M R+++PQA +RM PPLV+QSIMQLKNTSLLSVLA+PDLLYQGQ+I Sbjct: 123 SEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQSIMQLKNTSLLSVLALPDLLYQGQVI 182 Query: 181 AHETYRPLEIYTMVAVIYFLILLPATIWAKRLENR 215 AH++YRPLE+Y++VAV YF+ILLPATI +KRLE R Sbjct: 183 AHDSYRPLEVYSVVAVAYFIILLPATIISKRLEGR 217 >ref|YP_001523733.1| ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 220 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 141/216 (65%), Positives = 175/216 (81%) Query: 1 MYHWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYV 60 MYHWDF +W +R ++ G G T+A+T+A V+LGL IGL GL +LS V AY+ Sbjct: 1 MYHWDFGLVWSYRWLLLDGLGVTVAFTIAIVVLGLAIGLLAGLAKLSPFRPVGWLASAYI 60 Query: 61 EVFRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQ 120 EVFRCTPVLVQL+WFYYA+P+L GIEMSA T+ +LAL+LYGG+FY+EIIRGGIVSID GQ Sbjct: 61 EVFRCTPVLVQLIWFYYAMPILTGIEMSAFTAGILALSLYGGSFYAEIIRGGIVSIDRGQ 120 Query: 121 SEAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII 180 +EAG ALGM Q+MRRV+LPQA KRM PPL++QSI+Q KNTSL+SVLAVPDLLYQGQ+ Sbjct: 121 TEAGEALGMVPSQIMRRVVLPQALKRMVPPLMNQSIIQFKNTSLVSVLAVPDLLYQGQVA 180 Query: 181 AHETYRPLEIYTMVAVIYFLILLPATIWAKRLENRL 216 AH++YRPLE+YT++A+IYFL L P T+ +R E RL Sbjct: 181 AHDSYRPLELYTVIAIIYFLALFPLTVLVRRGEARL 216 >ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 264 Score = 287 bits (735), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 155/212 (73%), Positives = 186/212 (87%) Query: 2 YHWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVE 61 Y WDFA LW++R+++ G YTL +TV CV+LGLL+G+ GLGRLSTNP ++ PLRAY+E Sbjct: 46 YDWDFAVLWKYRSLLISGLLYTLLFTVVCVVLGLLVGVVTGLGRLSTNPYITAPLRAYIE 105 Query: 62 VFRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQS 121 VFRCTPVLVQLVWFYYALPVL G+E+SA +A L L LYGGAFYSEI+RGGI+SI+ GQ+ Sbjct: 106 VFRCTPVLVQLVWFYYALPVLTGLELSATAAATLCLTLYGGAFYSEIVRGGIISIEAGQT 165 Query: 122 EAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIA 181 EAG ALGMTR QL+RR++LPQAFK+M PPL+SQSIMQLKNTSLLSVLAVPDLLYQGQ+IA Sbjct: 166 EAGKALGMTRLQLLRRILLPQAFKKMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIA 225 Query: 182 HETYRPLEIYTMVAVIYFLILLPATIWAKRLE 213 H+TYRPLE+YT +A+ YF +LLP TIWAKR+E Sbjct: 226 HDTYRPLELYTFIAIAYFAVLLPITIWAKRME 257 >ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gb|EFH10275.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 220 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 146/220 (66%), Positives = 174/220 (79%), Gaps = 8/220 (3%) Query: 1 MYHWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLR--- 57 MY+WDFA +W +R + G TLA+T A VLLGL +GL GL RLS PLR Sbjct: 1 MYNWDFAVVWSYRWLFVNGLWVTLAFTAAIVLLGLAVGLFSGLLRLSR----LAPLRWFS 56 Query: 58 -AYVEVFRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSI 116 AYVE+FRCTP+LVQLVWFYYALP+L GI+MSA T+ +LAL+LYGGAFYSEI+RGGI SI Sbjct: 57 QAYVELFRCTPILVQLVWFYYALPILTGIQMSATTAGVLALSLYGGAFYSEIVRGGIASI 116 Query: 117 DIGQSEAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQ 176 + GQSEA ALGMT Q MRR++LPQA KRM PPL++QSI+QLKNTSL+SVLAVPDLLYQ Sbjct: 117 ESGQSEAALALGMTPAQSMRRIVLPQAMKRMVPPLMNQSIIQLKNTSLVSVLAVPDLLYQ 176 Query: 177 GQIIAHETYRPLEIYTMVAVIYFLILLPATIWAKRLENRL 216 GQ AH++YRPLEIYT+VA+IYF++L P T+ RLE RL Sbjct: 177 GQAAAHDSYRPLEIYTVVAIIYFVVLFPLTLLVGRLERRL 216