BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0031.p         (130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002875089.1| putative AsnC family regulatory protein [Pse...   132   1e-29
ref|YP_004356636.1| Fis family transcriptional regulator [Pseudo...   130   6e-29
ref|ZP_07777918.1| transcriptional regulator, AsnC family [Pseud...   130   8e-29
ref|YP_442826.1| AsnC family transcriptional regulator [Burkhold...   129   1e-28
ref|ZP_02374654.1| transcriptional regulator, AsnC family protei...   129   1e-28

>ref|YP_002875089.1| putative AsnC family regulatory protein [Pseudomonas fluorescens
           SBW25]
 emb|CAY52876.1| putative AsnC-family regulatory protein [Pseudomonas fluorescens
           SBW25]
          Length = 160

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 82/109 (75%), Gaps = 3/109 (2%)

Query: 22  SSLERLGTTLPDGVIVGYTVKLGQEAQDSGLLAYVGITVEAKTARDVLKRFKRIPEIEQL 81
           S L RL  T    VI GY V+LGQ   D GL AYVGITV+A++ +DVL+R   + +++QL
Sbjct: 51  SRLARLEKT---QVITGYGVRLGQRVVDGGLQAYVGITVQARSGKDVLRRLSAMAQVQQL 107

Query: 82  CSVSGEFDYVAWLRAGSAEQLDKLLDDIGEIEGVRKTTTSIVLSRKIDR 130
           C+VSGEFDYVAWLR  S EQLD+LLD IG ++GV KTTTSI+LS K+DR
Sbjct: 108 CAVSGEFDYVAWLRTDSPEQLDQLLDQIGSVDGVEKTTTSIILSNKLDR 156


>ref|YP_004356636.1| Fis family transcriptional regulator [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gb|AEA71632.1| putative transcriptional regulator, Fis family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 153

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 3/109 (2%)

Query: 22  SSLERLGTTLPDGVIVGYTVKLGQEAQDSGLLAYVGITVEAKTARDVLKRFKRIPEIEQL 81
           S L RL  T    VI GY V+LGQ   D GL AYVGI V+ ++ +DVL+R   + +++QL
Sbjct: 44  SRLARLEKT---KVITGYGVRLGQRVIDGGLQAYVGIKVQPRSGKDVLRRLSAMAQVQQL 100

Query: 82  CSVSGEFDYVAWLRAGSAEQLDKLLDDIGEIEGVRKTTTSIVLSRKIDR 130
           C+VSGEFDYVAWLR  S EQLD+LLD IG +EGV KTTTSI+LS KIDR
Sbjct: 101 CAVSGEFDYVAWLRTDSPEQLDQLLDQIGSVEGVEKTTTSIILSSKIDR 149


>ref|ZP_07777918.1| transcriptional regulator, AsnC family [Pseudomonas fluorescens
           WH6]
 gb|EFQ60841.1| transcriptional regulator, AsnC family [Pseudomonas fluorescens
           WH6]
          Length = 156

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 3/109 (2%)

Query: 22  SSLERLGTTLPDGVIVGYTVKLGQEAQDSGLLAYVGITVEAKTARDVLKRFKRIPEIEQL 81
           S L RL  T    VI GY V+LGQ   D GL AYVGITV+A++ ++VL+R   + +++QL
Sbjct: 47  SRLARLEKT---QVITGYGVRLGQRVVDGGLQAYVGITVQARSGKEVLRRLSAMAQVQQL 103

Query: 82  CSVSGEFDYVAWLRAGSAEQLDKLLDDIGEIEGVRKTTTSIVLSRKIDR 130
           C+VSGEFDYVAWLR  S EQLD+LLD +G ++GV KTTTSI+LS K+DR
Sbjct: 104 CAVSGEFDYVAWLRTDSPEQLDQLLDQMGSVDGVEKTTTSIILSNKLDR 152


>ref|YP_442826.1| AsnC family transcriptional regulator [Burkholderia thailandensis
           E264]
 gb|ABC38362.1| transcriptional regulator, AsnC family [Burkholderia thailandensis
           E264]
          Length = 295

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 77/96 (80%)

Query: 35  VIVGYTVKLGQEAQDSGLLAYVGITVEAKTARDVLKRFKRIPEIEQLCSVSGEFDYVAWL 94
           VI GY+V+LGQ+  D+ + AYVGI +  K  +DVLKR  R+PE++ LC+VSGE+DYVAWL
Sbjct: 196 VIAGYSVRLGQDVLDASIYAYVGIILAPKYGKDVLKRLDRMPEVQLLCAVSGEYDYVAWL 255

Query: 95  RAGSAEQLDKLLDDIGEIEGVRKTTTSIVLSRKIDR 130
           RA S E+L+ LLD IG +EGV +TTTSI+L+RKIDR
Sbjct: 256 RADSPERLNDLLDQIGALEGVERTTTSIILARKIDR 291


>ref|ZP_02374654.1| transcriptional regulator, AsnC family protein [Burkholderia
           thailandensis TXDOH]
          Length = 153

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 77/96 (80%)

Query: 35  VIVGYTVKLGQEAQDSGLLAYVGITVEAKTARDVLKRFKRIPEIEQLCSVSGEFDYVAWL 94
           VI GY+V+LGQ+  D+ + AYVGI +  K  +DVLKR  R+PE++ LC+VSGE+DYVAWL
Sbjct: 54  VIAGYSVRLGQDVLDASIYAYVGIILAPKYGKDVLKRLDRMPEVQLLCAVSGEYDYVAWL 113

Query: 95  RAGSAEQLDKLLDDIGEIEGVRKTTTSIVLSRKIDR 130
           RA S E+L+ LLD IG +EGV +TTTSI+L+RKIDR
Sbjct: 114 RADSPERLNDLLDQIGALEGVERTTTSIILARKIDR 149