BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0029.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774757.1| ABC transporter substrate-binding protein [Brad... 309 3e-82 ref|YP_001523732.1| ABC transporter substrate-binding protein [A... 308 8e-82 ref|YP_004753345.1| ABC transporter substrate-binding protein [C... 292 3e-77 ref|YP_001770446.1| extracellular solute-binding protein [Methyl... 290 2e-76 ref|YP_002947448.1| extracellular solute-binding protein family ... 271 1e-70 >ref|NP_774757.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53382.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 284 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 150/253 (59%), Positives = 186/253 (73%), Gaps = 1/253 (0%) Query: 26 QSAPGAESTFARIKRTKVLRIGGVRGQAPYYNKDLASGEWVGFMVDFAKNLAASLNVKLE 85 Q+A ESTFARI+RTK +RIG V G APYY KDLASG+W GF VD AK LA + +LE Sbjct: 31 QAADPNESTFARIRRTKKMRIGAVGGGAPYYMKDLASGQWKGFYVDIAKALADDMEAELE 90 Query: 86 VLETTWGNSVLDLQTRKIDVFFGLNPTPARRETVGFSEPLFNNAFTIVSKKGFAPKTWEE 145 + ETTWGNSVLDLQ+ KID+FFGLNPTP R V FS P+FNNAF I+ KK F PKTW E Sbjct: 91 ITETTWGNSVLDLQSNKIDIFFGLNPTPKRALVVDFSVPVFNNAFGILCKKDFKPKTWAE 150 Query: 146 LNKPEVKIGVDIGSSHDAMISRVCPKATIVRLEKADDATLALQTGRVDVQVLVWLLALNV 205 LN P+VKI VD GSSHD ++SR+ PKA I RL+ ADDAT ALQTGRVD Q L+ +L+L V Sbjct: 151 LNSPDVKIAVDQGSSHDQVVSRLIPKAQISRLKTADDATAALQTGRVDAQCLITMLSLTV 210 Query: 206 LKKNPSLGTMIVPMPLEATSTNIGVPKEDDKAWLDYINKWIVQERAAGKVKSTVLENLQK 265 LKKNPSLG ++P P+ AT++N G +E DK W DY+N WI + G +++ ++ N++ Sbjct: 211 LKKNPSLGQFVLPTPIFATTSNAGFRRETDKTWRDYVNTWIDFNKGLGFIRNAIITNME- 269 Query: 266 LSGVRPEDVPPQI 278 L GV D+PP + Sbjct: 270 LVGVTEADIPPGV 282 >ref|YP_001523732.1| ABC transporter substrate-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF86814.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 282 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 147/254 (57%), Positives = 191/254 (75%), Gaps = 3/254 (1%) Query: 25 AQSAPGAESTFARIKRTKVLRIGGVRGQAPYYNKDLASGEWVGFMVDFAKNLAASLNVKL 84 AQSA ESTF RI+RTK LRIG V G APYYNKDLA+G+W GF +D +K LA L +L Sbjct: 30 AQSAD--ESTFDRIRRTKKLRIGAVAGGAPYYNKDLATGQWKGFYIDISKALADELECQL 87 Query: 85 EVLETTWGNSVLDLQTRKIDVFFGLNPTPARRETVGFSEPLFNNAFTIVSKKGFAPKTWE 144 E+ ETTWGNSVLDLQ KID+FFGLNPTP R V FS P+F+NAFT++++K FAPKTW Sbjct: 88 EITETTWGNSVLDLQANKIDIFFGLNPTPKRALVVDFSVPVFSNAFTMLTRKDFAPKTWA 147 Query: 145 ELNKPEVKIGVDIGSSHDAMISRVCPKATIVRLEKADDATLALQTGRVDVQVLVWLLALN 204 ELN P VKI VD+GSSHD ++SR+CPKA IVRL+ AD+AT+AL +GRVD Q ++ +LAL Sbjct: 148 ELNDPNVKIAVDVGSSHDQVVSRLCPKAQIVRLKTADEATMALVSGRVDAQCIILMLALT 207 Query: 205 VLKKNPSLGTMIVPMPLEATSTNIGVPKEDDKAWLDYINKWIVQERAAGKVKSTVLENLQ 264 V KKNP++G ++VP P+ +T++N G +E+DK W DY+N WI + G ++S ++ N++ Sbjct: 208 VRKKNPNVGQLLVPTPVFSTTSNAGFRRENDKTWRDYVNTWIEYNKGLGFIRSAIVTNME 267 Query: 265 KLSGVRPEDVPPQI 278 L GV D+P I Sbjct: 268 -LVGVTEADMPAGI 280 >ref|YP_004753345.1| ABC transporter substrate-binding protein [Collimonas fungivorans Ter331] gb|AEK62522.1| ABC transporter substrate-binding protein [Collimonas fungivorans Ter331] Length = 339 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 146/279 (52%), Positives = 194/279 (69%), Gaps = 9/279 (3%) Query: 3 NRRRFITN---VAGLAAAGYLPGVFAQSAPGAESTFARIKRTKVLRIGGVRGQAPYYNKD 59 NRR FI V LAAAG VF+Q EST ARIKRT LR+G + G +PY+ KD Sbjct: 65 NRRNFIAQAIAVGSLAAAG---PVFSQEP---ESTAARIKRTGKLRMGAINGASPYFTKD 118 Query: 60 LASGEWVGFMVDFAKNLAASLNVKLEVLETTWGNSVLDLQTRKIDVFFGLNPTPARRETV 119 LASGEW GFMVD ++LA L V +E +ETTWGN+VLD+QT KID G+ P+PARRE V Sbjct: 119 LASGEWKGFMVDLGRDLAKYLKVDVEWVETTWGNAVLDVQTNKIDCQLGMAPSPARREVV 178 Query: 120 GFSEPLFNNAFTIVSKKGFAPKTWEELNKPEVKIGVDIGSSHDAMISRVCPKATIVRLEK 179 FS P+F N T+V+KKGF + WE+LN P VK+ VD+GSSHD +++R+ PKAT++R E Sbjct: 179 DFSAPIFQNYNTVVAKKGFNFERWEQLNSPSVKVAVDVGSSHDQLVTRILPKATVLRFET 238 Query: 180 ADDATLALQTGRVDVQVLVWLLALNVLKKNPSLGTMIVPMPLEATSTNIGVPKEDDKAWL 239 + AT+ALQ+GRVD QVLV LL+ +L K P++G ++ P P E TN+G+ K+ D+ + Sbjct: 239 SAAATMALQSGRVDCQVLVILLSTALLTKLPNVGHIVFPSPDETNPTNVGIRKQSDQTFT 298 Query: 240 DYINKWIVQERAAGKVKSTVLENLQKLSGVRPEDVPPQI 278 +N W+ + RA+GKVKST++ N+Q L GV P P Q+ Sbjct: 299 KSVNAWLEEARASGKVKSTIISNMQTLVGVPPTAFPSQV 337 >ref|YP_001770446.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gb|ACA18012.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 282 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 137/247 (55%), Positives = 177/247 (71%), Gaps = 1/247 (0%) Query: 32 ESTFARIKRTKVLRIGGVRGQAPYYNKDLASGEWVGFMVDFAKNLAASLNVKLEVLETTW 91 E+TF R++RT+ LRIG V G APYY +DLASG+W GF +D K LA L +L+V ETTW Sbjct: 35 ETTFERVRRTRKLRIGAVNGGAPYYYRDLASGQWKGFYIDICKALADELECELDVTETTW 94 Query: 92 GNSVLDLQTRKIDVFFGLNPTPARRETVGFSEPLFNNAFTIVSKKGFAPKTWEELNKPEV 151 GNSVLDLQ K DVFFGLNPTP R V FS P+F NAFT +++KGF KTW E+N P V Sbjct: 95 GNSVLDLQAGKTDVFFGLNPTPKRALVVDFSVPVFANAFTFITRKGFERKTWAEMNDPAV 154 Query: 152 KIGVDIGSSHDAMISRVCPKATIVRLEKADDATLALQTGRVDVQVLVWLLALNVLKKNPS 211 +I VD GSSHDA+++R+ PKA I RL+ ADDAT ALQ GRVD Q LV++L+L VLKKNP+ Sbjct: 155 RIAVDAGSSHDAVVTRLAPKAQITRLKGADDATAALQAGRVDAQCLVFILSLTVLKKNPA 214 Query: 212 LGTMIVPMPLEATSTNIGVPKEDDKAWLDYINKWIVQERAAGKVKSTVLENLQKLSGVRP 271 LG +P P+ +T++N G +E DK W DY++ WI + G ++S ++ NL+ +GV Sbjct: 215 LGQFTLPTPIFSTTSNAGFRREADKTWRDYVSTWIEFNKGMGFIRSAIIGNLES-AGVTE 273 Query: 272 EDVPPQI 278 D PP + Sbjct: 274 ADFPPGV 280 >ref|YP_002947448.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gb|ACS22182.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 277 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 134/278 (48%), Positives = 184/278 (66%), Gaps = 3/278 (1%) Query: 1 MQNRRRFITNVAGLAAAGYLPGVFAQSAPGAESTFARIKRTKVLRIGGVRGQAPYYNKDL 60 M +R + + L +A L AQ ES+ R++RTKVLR+G + G PY++KDL Sbjct: 1 MTTKRAILRTLLALTSACTLTLSVAQEP---ESSMTRVQRTKVLRVGAIAGAIPYFSKDL 57 Query: 61 ASGEWVGFMVDFAKNLAASLNVKLEVLETTWGNSVLDLQTRKIDVFFGLNPTPARRETVG 120 SG+W GF DF+++LA K+E +ETTWGN+VLDLQ+ KID FG+ PTPAR+E V Sbjct: 58 VSGKWEGFGPDFSESLAKKFGAKVEYVETTWGNAVLDLQSNKIDAMFGMAPTPARKEVVN 117 Query: 121 FSEPLFNNAFTIVSKKGFAPKTWEELNKPEVKIGVDIGSSHDAMISRVCPKATIVRLEKA 180 FS+ LF+N +T V KKGF KTWE+LN PE KI VD+GSSHD + +R+ PKA + RLE + Sbjct: 118 FSDTLFDNTYTAVCKKGFPTKTWEQLNAPENKIVVDVGSSHDQLATRILPKADVQRLENS 177 Query: 181 DDATLALQTGRVDVQVLVWLLALNVLKKNPSLGTMIVPMPLEATSTNIGVPKEDDKAWLD 240 ATLALQ GR D Q+LV LLA +L K ++G M +P P+ +IG+ KE D A Sbjct: 178 GSATLALQAGRADCQILVILLAQPLLAKRANVGVMQIPTPIYTAPVSIGLRKEADPAMQT 237 Query: 241 YINKWIVQERAAGKVKSTVLENLQKLSGVRPEDVPPQI 278 +N W+ + RA G+V+S +L+N++KL+GV P +I Sbjct: 238 AVNAWLGEVRAKGEVRSVILKNMEKLAGVPASAFPSEI 275