BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0016.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_297781.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:ox... 433 e-119 ref|ZP_07674485.1| phenoxybenzoate dioxygenase subunit beta (4-c... 421 e-115 ref|YP_001893017.1| ferredoxin [Ralstonia pickettii 12J] >gi|241... 421 e-115 ref|YP_728901.1| flavodoxin reductase (ferredoxin-NADPH reductas... 418 e-115 ref|YP_004680891.1| phenoxybenzoate dioxygenase subunit beta [Cu... 417 e-114 >ref|YP_297781.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region [Ralstonia eutropha JMP134] gb|AAZ62937.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region [Ralstonia eutropha JMP134] Length = 318 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/312 (67%), Positives = 244/312 (78%), Gaps = 1/312 (0%) Query: 6 LSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 L++RVQA+R+EA+GIVS+EL P+GA LP + G+H+DLHL NG+VRSYSL AP R R Sbjct: 7 LTMRVQAMRYEARGIVSLELQDPDGATLPEYGPGAHIDLHLGNGLVRSYSLCGAPEVRDR 66 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 Y VGVL DRNSRGGSRYVHEQLRVGATL +SAPRNNF +DESA H+VL+AGGIG+TPI C Sbjct: 67 YTVGVLQDRNSRGGSRYVHEQLRVGATLNVSAPRNNFELDESAAHTVLVAGGIGVTPIVC 126 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASEL-LQQTGVSSHFDAEKGAPPDLRAFLASKPK 184 M L G+S LLYCAR+RAEAAF L V HFD E GAPPD++A LA + Sbjct: 127 MARRLAELGRSFTLLYCARTRAEAAFVDSLSAYGDAVRFHFDDEAGAPPDMKAMLAGQDA 186 Query: 185 DAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKSVTV 244 H YCCGP PMLNAFEA C G PNVHIERFAA + E+VQ EYV +L+R+ V V Sbjct: 187 QTHLYCCGPGPMLNAFEAACEAHGYPNVHIERFAADPSTESVQEGEYVVQLSRTGSLVKV 246 Query: 245 PAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMMVCV 304 P+GKSLLDALL+AGLDVEHSCREGVCG+CET VLEG P+HRD VLS +E+ASNK MMVCV Sbjct: 247 PSGKSLLDALLEAGLDVEHSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNKTMMVCV 306 Query: 305 SGCKGRRLVLDL 316 SGCKG RLVLDL Sbjct: 307 SGCKGSRLVLDL 318 >ref|ZP_07674485.1| phenoxybenzoate dioxygenase subunit beta (4-carboxydiphenyl ether;phenoxybenzoate dioxygenase subunit beta) [Ralstonia sp. 5_7_47FAA] gb|EFP67165.1| phenoxybenzoate dioxygenase subunit beta (4-carboxydiphenyl ether;phenoxybenzoate dioxygenase subunit beta) [Ralstonia sp. 5_7_47FAA] Length = 316 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/312 (65%), Positives = 245/312 (78%), Gaps = 1/312 (0%) Query: 6 LSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 L++RV A+R+EAQGIVSVEL +G LP + G+H++LHL NG+VRSYSL AP R R Sbjct: 5 LNLRVHAMRYEAQGIVSVELRDVDGKTLPEYAPGAHIELHLGNGLVRSYSLCGAPEVRDR 64 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 YVVGVL DRNSRGGSRYVHEQLRVG+TL+I PRN+F +DE+A ++VL+AGGIG+TPI C Sbjct: 65 YVVGVLLDRNSRGGSRYVHEQLRVGSTLKIGGPRNHFEMDETAPYTVLVAGGIGVTPIVC 124 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASELLQQ-TGVSSHFDAEKGAPPDLRAFLASKPK 184 M L +GK+ +LYCARSRA+AAFA EL V H DAE G PPDL+A LA Sbjct: 125 MARRLAEQGKAFSMLYCARSRADAAFADELAGHGDAVRFHLDAEAGGPPDLKALLAGHST 184 Query: 185 DAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKSVTV 244 D HFYCCGP PML AFEA C LG NVHIERFAA VE+VQ EY +LAR+ + V Sbjct: 185 DTHFYCCGPGPMLRAFEAACEALGYTNVHIERFAADPGVESVQDGEYQVKLARNGAELCV 244 Query: 245 PAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMMVCV 304 PAGKSLLDALL+ G++VEHSC+EGVCG+CET+VLEGEP+HRD VLSK+E+ASN+ MMVCV Sbjct: 245 PAGKSLLDALLEIGVEVEHSCKEGVCGSCETRVLEGEPDHRDSVLSKSERASNQTMMVCV 304 Query: 305 SGCKGRRLVLDL 316 SGCKG+RLV+DL Sbjct: 305 SGCKGKRLVIDL 316 >ref|YP_001893017.1| ferredoxin [Ralstonia pickettii 12J] ref|YP_002984543.1| ferredoxin [Ralstonia pickettii 12D] gb|ACD29590.1| ferredoxin [Ralstonia pickettii 12J] gb|ACS65871.1| ferredoxin [Ralstonia pickettii 12D] Length = 316 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 207/315 (65%), Positives = 246/315 (78%), Gaps = 1/315 (0%) Query: 3 SSLLSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAE 62 +S L++RV A+R+EAQGIVSVEL +G LP + G+H++LHL NG+VRSYSL AP Sbjct: 2 NSPLNLRVHAMRYEAQGIVSVELRDVDGKTLPEYAPGAHIELHLGNGLVRSYSLCGAPEV 61 Query: 63 RHRYVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITP 122 R RYVVGVL DRNSRGGSRYVHEQLRVG+TL+I PRN+F +DE+A +VL+AGGIG+TP Sbjct: 62 RDRYVVGVLLDRNSRGGSRYVHEQLRVGSTLKIGGPRNHFELDETAPRTVLVAGGIGVTP 121 Query: 123 ISCMLNYLRGKGKSAELLYCARSRAEAAFASELLQQ-TGVSSHFDAEKGAPPDLRAFLAS 181 I CM L +GK+ +LYCARSRAEAAFA EL V H DAE G PDL+A LA Sbjct: 122 IVCMARRLAEQGKAFSMLYCARSRAEAAFADELAAHGEAVRFHLDAEAGGAPDLKALLAG 181 Query: 182 KPKDAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKS 241 P D HFYCCGP PML AFEA C LG NVHIERFAA VE+VQ EY +LAR+ Sbjct: 182 HPADTHFYCCGPGPMLRAFEAACEALGYTNVHIERFAADPGVESVQEGEYQVKLARNGAE 241 Query: 242 VTVPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMM 301 + VPAGKSLLDALL+ G++VEHSC+EGVCG+CET+VLEGEP+HRD VLSK+E+ASN+ MM Sbjct: 242 LCVPAGKSLLDALLEIGVEVEHSCKEGVCGSCETRVLEGEPDHRDSVLSKSERASNQTMM 301 Query: 302 VCVSGCKGRRLVLDL 316 VCVSGCKG+RLV+DL Sbjct: 302 VCVSGCKGKRLVIDL 316 >ref|YP_728901.1| flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1 [Ralstonia eutropha H16] emb|CAJ95536.1| flavodoxin reductase (ferredoxin-NADPH reductase) family 1 [Ralstonia eutropha H16] Length = 318 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 203/312 (65%), Positives = 237/312 (75%), Gaps = 1/312 (0%) Query: 6 LSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 L++RV A+R+EA+G+VS+EL PEG LP + G+H+DLHL NG+VRSYSL AP R R Sbjct: 7 LTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGAPEARRR 66 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 Y VGVL DR SRGGSRYVHEQLRVGATL + APRNNF +DESA H+VL+AGGIG+TPI C Sbjct: 67 YTVGVLLDRGSRGGSRYVHEQLRVGATLTVGAPRNNFELDESAAHTVLVAGGIGVTPIVC 126 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASEL-LQQTGVSSHFDAEKGAPPDLRAFLASKPK 184 M L G+S L+YCARSRAEAAF +L V HFD E G PPDL A LA + Sbjct: 127 MARRLAELGRSFTLIYCARSRAEAAFVEQLSAHGDAVHFHFDDEAGVPPDLNAMLAGQEV 186 Query: 185 DAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKSVTV 244 HFYCCGP PML AFEA C G PNVHIERFAA + EAVQ EY L+R+ +V V Sbjct: 187 QTHFYCCGPGPMLKAFEAACEAHGYPNVHIERFAADPSTEAVQEGEYTVSLSRTGTTVKV 246 Query: 245 PAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMMVCV 304 P+GKSLLDALLDAG+ +++SCREGVCG+CET VLEG P+HRD VLS +E+ASNK MMVCV Sbjct: 247 PSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSNSERASNKTMMVCV 306 Query: 305 SGCKGRRLVLDL 316 SGCKG +LVLDL Sbjct: 307 SGCKGSKLVLDL 318 >ref|YP_004680891.1| phenoxybenzoate dioxygenase subunit beta [Cupriavidus necator N-1] gb|AEI79659.1| phenoxybenzoate dioxygenase subunit beta [Cupriavidus necator N-1] Length = 318 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/312 (64%), Positives = 235/312 (75%), Gaps = 1/312 (0%) Query: 6 LSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 L++RV A+R+EA+G+VS+EL PEG LP + G+H+DLHL NG+VRSYSL AP R R Sbjct: 7 LTLRVHAMRYEARGVVSIELQDPEGKTLPEYSPGAHIDLHLGNGLVRSYSLCGAPEARQR 66 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 Y VGVL DR SRGGSRYVHEQLRVG TL + APRNNF +DESA H+VL+AGGIG+TPI C Sbjct: 67 YTVGVLLDRGSRGGSRYVHEQLRVGTTLTVGAPRNNFALDESAAHTVLVAGGIGVTPIVC 126 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASEL-LQQTGVSSHFDAEKGAPPDLRAFLASKPK 184 M L GKS L+YCARSRAEAAF +L V HFD E G PPDL A LA + Sbjct: 127 MARRLAELGKSFTLIYCARSRAEAAFVEQLSAHGDAVRFHFDDEAGVPPDLNAMLAGQDP 186 Query: 185 DAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKSVTV 244 HFYCCGP PML AFEA C PNVHIERFAA + EAVQ EY L+R+ +V V Sbjct: 187 QTHFYCCGPGPMLKAFEAACEAHSYPNVHIERFAADPSTEAVQEGEYTVSLSRTGTTVKV 246 Query: 245 PAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMMVCV 304 P+GKSLLDALLDAG+ +++SCREGVCG+CET VLEG P+HRD VLS +E+ASNK MMVCV Sbjct: 247 PSGKSLLDALLDAGVQMDYSCREGVCGSCETAVLEGCPDHRDSVLSSSERASNKTMMVCV 306 Query: 305 SGCKGRRLVLDL 316 SGCKG +LVLDL Sbjct: 307 SGCKGSKLVLDL 318