BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0013.p (127 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002907548.1| methyl-accepting chemotaxis sensory transduc... 118 3e-25 ref|ZP_03544938.1| methyl-accepting chemotaxis sensory transduce... 118 4e-25 ref|YP_001903561.1| membrane-anchored chemotaxis sensory transdu... 116 1e-24 ref|NP_637234.1| chemotaxis protein [Xanthomonas campestris pv. ... 116 1e-24 ref|ZP_08178986.1| methyl-accepting chemotaxis protein [Xanthomo... 115 2e-24 >ref|YP_002907548.1| methyl-accepting chemotaxis sensory transducer [Burkholderia glumae BGR1] ref|YP_002909862.1| methyl-accepting chemotaxis sensory transducer [Burkholderia glumae BGR1] gb|ACR32626.1| Methyl-accepting chemotaxis sensory transducer [Burkholderia glumae BGR1] gb|ACR32698.1| Methyl-accepting chemotaxis sensory transducer [Burkholderia glumae BGR1] Length = 565 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 6/127 (4%) Query: 1 MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60 MD++V SV+RV+DI+GEI+ AS EQS+GIEQ+N A+ MDEVTQQNAALVEQA AAAQS+ Sbjct: 443 MDEIVRSVQRVTDIMGEIASASAEQSTGIEQINTAVAQMDEVTQQNAALVEQATAAAQSM 502 Query: 61 QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVA-PRIGAPAVRT 119 DQ+ +L V +FR++++ LA P +V P+ A R+ A PR+ A RT Sbjct: 503 ADQAESLRATVSIFRVDARAQTELAAPVKQSVSVGPK---QAKRRYEPAQPRLAAA--RT 557 Query: 120 GDGDWET 126 G G+W T Sbjct: 558 GSGEWAT 564 >ref|ZP_03544938.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] gb|EED69224.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] Length = 581 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/144 (44%), Positives = 94/144 (65%), Gaps = 17/144 (11%) Query: 1 MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60 M ++VASV+RVSD++GEI+ +S EQ GI QVNQA++++D++TQQNAALVE+++AAA S+ Sbjct: 438 MSEIVASVRRVSDLIGEITASSTEQRDGINQVNQAVSNLDQMTQQNAALVEESSAAALSM 497 Query: 61 QDQSANLAQVVGVFRLNSQDA-PRLAKPAGPVATVAPRI---------GAPAVRKXTVAP 110 Q+Q+ LA+VV +F+L + + ++A P P + P + PA+RK P Sbjct: 498 QEQARRLAEVVSIFKLGHETSHAKVAAPQRPASRAMPAMAPVKQTAAAARPAIRKAPAGP 557 Query: 111 RIGA-------PAVRTGDGDWETF 127 A PA +GDGDWETF Sbjct: 558 APSALSASKAKPAADSGDGDWETF 581 >ref|YP_001903561.1| membrane-anchored chemotaxis sensory transducer [Xanthomonas campestris pv. campestris str. B100] emb|CAP51510.1| membrane-anchored chemotaxis sensory transducer [Xanthomonas campestris pv. campestris] Length = 788 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 1 MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60 M ++VASV+RV+DI+GEIS ASQEQS+GIEQVNQ IT MDE TQQNAALVE+A AAA+S+ Sbjct: 663 MAEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTITQMDETTQQNAALVEEATAAARSM 722 Query: 61 QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVAPRIGAPAVRTG 120 ++Q+ +LA+ V VF+L++ AP A+PA VA + A VR R Sbjct: 723 EEQAGHLAEAVSVFKLDAPAAPVHARPAAS-RPVAVKTAAKPVRSAAAPARPAKSETALA 781 Query: 121 DGDWETF 127 DG+W+ F Sbjct: 782 DGNWQEF 788 >ref|NP_637234.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_243393.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. 8004] gb|AAM41158.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY49373.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. 8004] Length = 790 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 1 MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60 M ++VASV+RV+DI+GEIS ASQEQS+GIEQVNQ IT MDE TQQNAALVE+A AAA+S+ Sbjct: 665 MAEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTITQMDETTQQNAALVEEATAAARSM 724 Query: 61 QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVAPRIGAPAVRTG 120 ++Q+ +LA+ V VF+L++ AP A+PA VA + A VR R Sbjct: 725 EEQAGHLAEAVSVFKLDAPAAPVHARPAAS-RPVAVKTAAKPVRSAAAPARPAKSETALA 783 Query: 121 DGDWETF 127 DG+W+ F Sbjct: 784 DGNWQEF 790 >ref|ZP_08178986.1| methyl-accepting chemotaxis protein [Xanthomonas vesicatoria ATCC 35937] gb|EGD08817.1| methyl-accepting chemotaxis protein [Xanthomonas vesicatoria ATCC 35937] Length = 808 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 4/128 (3%) Query: 1 MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60 M ++VASV+RV+DI+GEIS ASQEQS+GIEQVNQ IT MDE TQQNAALVE+A AAA+S+ Sbjct: 674 MAEIVASVQRVTDIMGEISAASQEQSTGIEQVNQTITQMDETTQQNAALVEEATAAARSM 733 Query: 61 QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVAT--VAPRIGAPAVRKXTVAP-RIGAPAV 117 ++Q+ +LA+ V VF+L+ A A+ PVA+ VA + A + + AP R P Sbjct: 734 EEQAGHLAEAVSVFKLDESAAAAQARVR-PVASRPVAVKTAAKSTVRTAAAPARSAKPQA 792 Query: 118 RTGDGDWE 125 DG+W+ Sbjct: 793 ALADGNWQ 800