BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0007.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum serop... 682 0.0 ref|YP_004751208.1| branched-chain acyl-CoA dehydrogenase [Colli... 662 0.0 ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidov... 592 e-167 ref|ZP_07045761.1| acyl-CoA dehydrogenase [Comamonas testosteron... 592 e-167 ref|ZP_03542616.1| acyl-CoA dehydrogenase domain protein [Comamo... 591 e-167 >ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64049.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 386 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/386 (86%), Positives = 358/386 (92%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFELN+DQLAFQ SARDFAAGEMAP AA+WDEE+HFP+DVIAKAGELGFC LYTPE G Sbjct: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGTKIG 120 GLGLSRLDATVVFEELA AC STAA+LTIHNMVSWMIASW P +KA WC LAAG KIG Sbjct: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLAAGRKIG 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYIINGSKAFISGAGATDVLVLMARTGGDGAKGVS 180 SYCLTEPGSGSDAASLKTTA+L DGHY++NGSKAFISGAG+TDVLV+MARTGG+GA+GVS Sbjct: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 Query: 181 AIVVPANTPGISYGKKEVKMGWNSQPTRTISFDNVKVPVNHLLGAEGEGFKFAMKGLDGG 240 AIVVP N PG+SYGKKE KMGWNSQPTRTISFDNVKVP +HLLG EG+GF FAMKGLDGG Sbjct: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPLADFQALQFKLADMQTELVAARQMVRLA 300 RINIATCSVGAAQAALDAAHAYMKERKQFGRP+ADFQALQFKLADMQTELVAARQMVRLA Sbjct: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 Query: 301 AVKLDSKSPNATTYCAMAKRFATDLGFKICNEALQIHGGYGYIREYPLERYFRDVRVHQI 360 A KLD+ SP ATTYCAMAKR ATDLGF++CNEALQ+HGGYGYIREYPLERYFRDVRVHQI Sbjct: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 Query: 361 LEGTNEIMRVIIARHLLNNDSNEDIR 386 LEGTNEIMRVII+R LL+ D+ +DIR Sbjct: 361 LEGTNEIMRVIISRKLLDRDNLDDIR 386 >ref|YP_004751208.1| branched-chain acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] gb|AEK60385.1| Branched-chain acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] Length = 403 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/386 (83%), Positives = 349/386 (90%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL+E+Q AFQ +ARDFA GE+APHAA+WD E+ FP DVIAKAGELGFC LYTPEEVG Sbjct: 18 MDFELSEEQRAFQQTARDFATGELAPHAAKWDAEAIFPTDVIAKAGELGFCGLYTPEEVG 77 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGTKIG 120 GLGLSRLDAT+VFEELA C ST A+LTIHNMVSWMIA+WATP VK WCG LA G K+G Sbjct: 78 GLGLSRLDATIVFEELARGCTSTTAYLTIHNMVSWMIANWATPAVKDAWCGKLALGQKLG 137 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYIINGSKAFISGAGATDVLVLMARTGGDGAKGVS 180 SYCLTEPGSGSDAASLKT+A L DGHY+INGSKAFISGAG+T+VLVLMARTG GA GVS Sbjct: 138 SYCLTEPGSGSDAASLKTSAVLTDGHYVINGSKAFISGAGSTNVLVLMARTGAGGAHGVS 197 Query: 181 AIVVPANTPGISYGKKEVKMGWNSQPTRTISFDNVKVPVNHLLGAEGEGFKFAMKGLDGG 240 A VVPA+ GISYG+KE KMGWNSQPTRTISFDNV++P +HLLG EGEGF+ AM+GLDGG Sbjct: 198 AFVVPADAAGISYGRKEEKMGWNSQPTRTISFDNVRIPADHLLGQEGEGFRLAMRGLDGG 257 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPLADFQALQFKLADMQTELVAARQMVRLA 300 RINIATCSVG AQAALDAAHAYM ER+QF RPL+DFQALQFKLADMQTELVAARQMVRLA Sbjct: 258 RINIATCSVGTAQAALDAAHAYMSERRQFNRPLSDFQALQFKLADMQTELVAARQMVRLA 317 Query: 301 AVKLDSKSPNATTYCAMAKRFATDLGFKICNEALQIHGGYGYIREYPLERYFRDVRVHQI 360 A KLD+K PNATTYCAMAKRFATD+GF+ICNEALQIHGGYGYIREYPLER+FRDVRVHQI Sbjct: 318 ACKLDAKDPNATTYCAMAKRFATDIGFQICNEALQIHGGYGYIREYPLERHFRDVRVHQI 377 Query: 361 LEGTNEIMRVIIARHLLNNDSNEDIR 386 LEGTNEIMRVIIAR LL N SNEDIR Sbjct: 378 LEGTNEIMRVIIARQLLGNASNEDIR 403 >ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gb|EER58824.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 388 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 283/388 (72%), Positives = 320/388 (82%), Gaps = 2/388 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL E+Q AF +AR+FA G++APHAA WDEE FP + IAKAGELGFC LY PE G Sbjct: 1 MDFELTEEQRAFAQTAREFAEGQLAPHAAHWDEEGIFPREAIAKAGELGFCGLYAPEAAG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGTKIG 120 GL L RLDAT+VFEE+A PST AF+TIHNM +WM+ +WATP V+ W L G K+ Sbjct: 61 GLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATPAVRDHWGPLLTTGEKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYIINGSKAFISGAGATDVLVLMARTG--GDGAKG 178 SYCLTEPG+GSDAASLKT A+LV Y+INGSKAFISGAG+TDVLVLMARTG GA G Sbjct: 121 SYCLTEPGAGSDAASLKTRAELVGHEYVINGSKAFISGAGSTDVLVLMARTGDASSGAAG 180 Query: 179 VSAIVVPANTPGISYGKKEVKMGWNSQPTRTISFDNVKVPVNHLLGAEGEGFKFAMKGLD 238 +SA VVPA+ PGISYGKKE KMGWNSQPTRTISFDNV++P +HLLG EGEGFK AMKGLD Sbjct: 181 ISAFVVPADAPGISYGKKEQKMGWNSQPTRTISFDNVRIPADHLLGREGEGFKIAMKGLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPLADFQALQFKLADMQTELVAARQMVR 298 GGRINIATCSVGAAQ AL A YM++RKQFG+P+A FQALQFKLADM TELVAARQMVR Sbjct: 241 GGRINIATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELVAARQMVR 300 Query: 299 LAAVKLDSKSPNATTYCAMAKRFATDLGFKICNEALQIHGGYGYIREYPLERYFRDVRVH 358 LAA KLD+ + +A+TYCAMAKRFATD GF + NEALQ+HGGYGYIREYPLER RD RVH Sbjct: 301 LAASKLDAGARDASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREYPLERLLRDARVH 360 Query: 359 QILEGTNEIMRVIIARHLLNNDSNEDIR 386 QILEGTNEIMRVII R +L+ D+ + IR Sbjct: 361 QILEGTNEIMRVIIGRRMLDGDAPQTIR 388 >ref|ZP_07045761.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] gb|EFI60572.1| acyl-CoA dehydrogenase [Comamonas testosteroni S44] Length = 388 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 283/388 (72%), Positives = 320/388 (82%), Gaps = 2/388 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL+EDQ AF +AR FA E+APHAA WD E FP D IAKAGELGFC LY PE +G Sbjct: 1 MDFELSEDQRAFADTARAFAQAELAPHAAEWDREHIFPRDAIAKAGELGFCGLYAPESIG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGTKIG 120 GL L RLDAT+VFEE+A PST AF+TIHNM +WM+ +WAT V+A W L +G+K+ Sbjct: 61 GLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEQLTSGSKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYIINGSKAFISGAGATDVLVLMARTG--GDGAKG 178 SYCLTEPG+GSDAASLKT A+LV YI+NGSKAFISGAG+TDVLVLMARTG G GA G Sbjct: 121 SYCLTEPGAGSDAASLKTRAELVGNEYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASG 180 Query: 179 VSAIVVPANTPGISYGKKEVKMGWNSQPTRTISFDNVKVPVNHLLGAEGEGFKFAMKGLD 238 +SA VPA+ G+SYGKKE KMGWNSQPTR ISFDNV++P ++LLG EGEGFK AMKGLD Sbjct: 181 ISAFAVPADAAGVSYGKKEEKMGWNSQPTRVISFDNVRIPAHNLLGREGEGFKIAMKGLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPLADFQALQFKLADMQTELVAARQMVR 298 GGRINIATCSVGAAQ AL A +YM+ERKQFG+ +A FQALQFKLADM TELVAARQMVR Sbjct: 241 GGRINIATCSVGAAQGALTQAQSYMQERKQFGKSIASFQALQFKLADMATELVAARQMVR 300 Query: 299 LAAVKLDSKSPNATTYCAMAKRFATDLGFKICNEALQIHGGYGYIREYPLERYFRDVRVH 358 LAA KLD+ + +A+TYCAMAKRFATD GF +CNEALQ+HGGYGYIREYPLER RD RVH Sbjct: 301 LAASKLDAGARDASTYCAMAKRFATDAGFMVCNEALQLHGGYGYIREYPLERLMRDARVH 360 Query: 359 QILEGTNEIMRVIIARHLLNNDSNEDIR 386 QILEGTNEIMRVIIAR +L D+ E IR Sbjct: 361 QILEGTNEIMRVIIARRMLEGDAPEVIR 388 >ref|ZP_03542616.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] gb|EED66902.1| acyl-CoA dehydrogenase domain protein [Comamonas testosteroni KF-1] Length = 388 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 283/388 (72%), Positives = 320/388 (82%), Gaps = 2/388 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL+EDQ AF +AR FA E+APHAA WD E FP + IAKAGELGFC LY PE +G Sbjct: 1 MDFELSEDQRAFADTARAFAQAELAPHAAEWDREHIFPREAIAKAGELGFCGLYAPESIG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGTKIG 120 GL L RLDAT+VFEE+A PST AF+TIHNM +WM+ +WAT V+A W L +G+K+ Sbjct: 61 GLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEQLTSGSKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYIINGSKAFISGAGATDVLVLMARTG--GDGAKG 178 SYCLTEPG+GSDAASLKT A+LV YI+NGSKAFISGAG+TDVLVLMARTG G GA G Sbjct: 121 SYCLTEPGAGSDAASLKTRAELVGNEYIVNGSKAFISGAGSTDVLVLMARTGDAGSGASG 180 Query: 179 VSAIVVPANTPGISYGKKEVKMGWNSQPTRTISFDNVKVPVNHLLGAEGEGFKFAMKGLD 238 +SA VVPA+ G+SYGKKE KMGWNSQPTR ISFDNV++P ++LLG EGEGFK AMKGLD Sbjct: 181 ISAFVVPADAAGVSYGKKEEKMGWNSQPTRVISFDNVRIPAHNLLGREGEGFKIAMKGLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPLADFQALQFKLADMQTELVAARQMVR 298 GGRINIATCSVGAAQ AL A YM+ERKQFG+ +A FQALQFKLADM TELVAARQMVR Sbjct: 241 GGRINIATCSVGAAQGALTQAQHYMQERKQFGKAIASFQALQFKLADMATELVAARQMVR 300 Query: 299 LAAVKLDSKSPNATTYCAMAKRFATDLGFKICNEALQIHGGYGYIREYPLERYFRDVRVH 358 LAA KLD+ + +A+TYCAMAKRFATD GF +CNEALQ+HGGYGYIREYPLER RD RVH Sbjct: 301 LAASKLDAGARDASTYCAMAKRFATDAGFMVCNEALQLHGGYGYIREYPLERLMRDARVH 360 Query: 359 QILEGTNEIMRVIIARHLLNNDSNEDIR 386 QILEGTNEIMRVIIAR +L D+ E IR Sbjct: 361 QILEGTNEIMRVIIARRMLEGDAPEVIR 388